Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70923 | Canola | nucleus | 96.08 | 95.61 |
| CDY41449 | Canola | nucleus | 54.41 | 91.74 |
| KRG99390 | Soybean | nucleus | 47.55 | 74.05 |
| Bra024591.1-P | Field mustard | nucleus | 73.53 | 45.73 |
| AT1G23380.2 | Thale cress | nucleus | 67.16 | 41.64 |
| CDX91713 | Canola | nucleus | 62.75 | 40.76 |
| CDY34012 | Canola | nucleus | 37.75 | 39.9 |
| CDY09448 | Canola | nucleus | 62.25 | 38.84 |
| CDY03742 | Canola | nucleus | 62.25 | 38.84 |
| KRH69600 | Soybean | nucleus | 56.37 | 37.34 |
| KRH74562 | Soybean | nucleus | 55.88 | 36.89 |
| VIT_01s0127g00210.t01 | Wine grape | nucleus | 56.37 | 36.16 |
| KRH45633 | Soybean | nucleus | 55.39 | 35.2 |
| Solyc05g005090.2.1 | Tomato | nucleus | 48.53 | 30.94 |
| PGSC0003DMT400035095 | Potato | nucleus | 51.47 | 30.52 |
| CDX93852 | Canola | nucleus | 25.49 | 23.42 |
| CDY12943 | Canola | nucleus | 41.67 | 22.19 |
| CDY19545 | Canola | nucleus | 41.67 | 22.19 |
| CDX83145 | Canola | nucleus | 42.65 | 21.64 |
| CDY45968 | Canola | nucleus | 26.96 | 18.77 |
| CDY66559 | Canola | nucleus | 25.98 | 18.03 |
| CDY64892 | Canola | nucleus | 25.98 | 18.03 |
| CDX88165 | Canola | nucleus | 25.0 | 17.06 |
| CDY68624 | Canola | nucleus | 26.47 | 15.47 |
| CDX75215 | Canola | nucleus | 25.0 | 13.64 |
| CDX68812 | Canola | nucleus | 25.0 | 13.64 |
| CDY13472 | Canola | nucleus | 25.49 | 13.61 |
| CDX72343 | Canola | nucleus | 25.49 | 13.0 |
| CDY51104 | Canola | nucleus | 25.0 | 12.98 |
| CDX78407 | Canola | nucleus | 24.51 | 12.95 |
| CDY44142 | Canola | nucleus | 14.71 | 12.77 |
| CDX85732 | Canola | nucleus | 24.51 | 12.72 |
| CDY05371 | Canola | nucleus | 25.0 | 12.62 |
| CDY04722 | Canola | nucleus | 13.24 | 12.22 |
| CDY05480 | Canola | nucleus | 25.0 | 12.14 |
| CDX80491 | Canola | nucleus | 25.49 | 11.71 |
| CDX70374 | Canola | nucleus | 16.67 | 11.26 |
| CDY41448 | Canola | nucleus | 10.29 | 10.1 |
| KRG99387 | Soybean | nucleus | 7.35 | 7.81 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.4 | GO:A0A078JRS2 | UniProt:A0A078JRS2 | EnsemblPlants:CDY69524 | ProteinID:CDY69524 |
| ProteinID:CDY69524.1 | InterPro:ELK_dom | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00088489001 |
| InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR005539 |
| PFAM:PF03789 | PFAM:PF05920 | ScanProsite:PS00027 | PFscan:PS50071 | PFscan:PS51213 | PANTHER:PTHR11850 |
| PANTHER:PTHR11850:SF99 | SMART:SM00389 | SMART:SM01188 | SUPFAM:SSF46689 | UniParc:UPI0004EDEB4A | SEG:seg |
Description
BnaAnng30720DBnaAnng30720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JRS2]
Coordinates
chrLK039613:-:1155..2144
Molecular Weight (calculated)
23258.7 Da
IEP (calculated)
6.665
GRAVY (calculated)
-0.609
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MKFGEEHKCE GKCGGCVLME TRLLVLSTDT MTMELTIHCG GFVLNAALNN RVHPRNSLFF STTDLTVNFA CAEDGAVSSD EELNGGDEIL QDGKQICEDR
101: DLKDRLLRKF GSRISSLKLE FSKKKKKGKL PKEARQALLD WWNVHYKWPY PTEGDKIALA DATGLDQKQI NNWFINQRKR HWKPSENMPF AMMDDSSGSF
201: FTEE
101: DLKDRLLRKF GSRISSLKLE FSKKKKKGKL PKEARQALLD WWNVHYKWPY PTEGDKIALA DATGLDQKQI NNWFINQRKR HWKPSENMPF AMMDDSSGSF
201: FTEE
001: MDGMYNFHSA GDYSDKSVLM MSPESLMFPS DYQALLCSSA GENRVSDVFG SDELLSVAVS ALSSEAASIA PEIRRNDDNV SLTVIKAKIA CHPSYPRLLQ
101: AYIDCQKVGA PPEIACLLEE IQRESDVYKQ EVVPSSCFGA DPELDEFMET YCDILVKYKS DLARPFDEAT CFLNKIEMQL RNLCTGVESA RGVSEDGVIS
201: SDEELSGGDH EVAEDGRQRC EDRDLKDRLL RKFGSRISTL KLEFSKKKKK GKLPREARQA LLDWWNLHYK WPYPTEGDKI ALADATGLDQ KQINNWFINQ
301: RKRHWKPSEN MPFAMMDDSS GSFFTEE
101: AYIDCQKVGA PPEIACLLEE IQRESDVYKQ EVVPSSCFGA DPELDEFMET YCDILVKYKS DLARPFDEAT CFLNKIEMQL RNLCTGVESA RGVSEDGVIS
201: SDEELSGGDH EVAEDGRQRC EDRDLKDRLL RKFGSRISTL KLEFSKKKKK GKLPREARQA LLDWWNLHYK WPYPTEGDKI ALADATGLDQ KQINNWFINQ
301: RKRHWKPSEN MPFAMMDDSS GSFFTEE
Arabidopsis Description
KNAT6KNOTTED1-like homeobox gene 6 [Source:TAIR;Acc:AT1G23380]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.