Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra024593.1-P | Field mustard | nucleus | 86.88 | 91.87 |
CDY44142 | Canola | nucleus | 97.29 | 91.49 |
CDY41448 | Canola | nucleus | 77.38 | 82.21 |
KRG99387 | Soybean | nucleus | 53.39 | 61.46 |
CDX91713 | Canola | nucleus | 79.64 | 56.05 |
AT1G23380.2 | Thale cress | nucleus | 81.0 | 54.41 |
CDY03742 | Canola | nucleus | 66.97 | 45.26 |
CDY09448 | Canola | nucleus | 66.52 | 44.95 |
VIT_01s0127g00210.t01 | Wine grape | nucleus | 58.37 | 40.57 |
KRH45633 | Soybean | nucleus | 57.92 | 39.88 |
KRH74562 | Soybean | nucleus | 55.66 | 39.81 |
KRH69600 | Soybean | nucleus | 53.85 | 38.64 |
Solyc05g005090.2.1 | Tomato | nucleus | 47.51 | 32.81 |
PGSC0003DMT400035095 | Potato | nucleus | 48.42 | 31.1 |
CDY68624 | Canola | nucleus | 30.32 | 19.2 |
CDX83145 | Canola | nucleus | 29.86 | 16.42 |
CDY12943 | Canola | nucleus | 26.24 | 15.14 |
CDY19545 | Canola | nucleus | 26.24 | 15.14 |
CDY69524 | Canola | nucleus | 12.22 | 13.24 |
CDX88165 | Canola | nucleus | 17.65 | 13.04 |
CDY45968 | Canola | nucleus | 16.74 | 12.63 |
CDY64892 | Canola | nucleus | 16.74 | 12.59 |
CDY66559 | Canola | nucleus | 16.74 | 12.59 |
CDX70374 | Canola | nucleus | 17.19 | 12.58 |
CDY70923 | Canola | nucleus | 11.31 | 12.2 |
CDY05371 | Canola | nucleus | 22.17 | 12.13 |
CDY05480 | Canola | nucleus | 21.72 | 11.43 |
CDX78407 | Canola | nucleus | 19.46 | 11.14 |
CDY51104 | Canola | nucleus | 19.46 | 10.94 |
CDY34012 | Canola | nucleus | 9.5 | 10.88 |
CDX85732 | Canola | nucleus | 19.0 | 10.69 |
CDX68812 | Canola | nucleus | 16.74 | 9.89 |
CDX75215 | Canola | nucleus | 16.29 | 9.63 |
CDY13472 | Canola | nucleus | 15.84 | 9.16 |
CDX80491 | Canola | nucleus | 18.1 | 9.01 |
CDX72343 | Canola | nucleus | 15.84 | 8.75 |
CDY41449 | Canola | nucleus | 4.52 | 8.26 |
CDX93852 | Canola | nucleus | 5.88 | 5.86 |
KRG99390 | Soybean | nucleus | 1.36 | 2.29 |
Protein Annotations
MapMan:15.5.3.4 | GO:A0A078EUS5 | EnsemblPlants:CDY04722 | ProteinID:CDY04722 | ProteinID:CDY04722.1 | GO:GO:0003674 |
GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00119361001 | InterPro:KNOX1 | InterPro:KNOX2 | PFAM:PF03790 | PFAM:PF03791 |
PANTHER:PTHR11850 | PANTHER:PTHR11850:SF99 | SMART:SM01255 | SMART:SM01256 | UniParc:UPI0004EB3F30 | SEG:seg |
Description
BnaC05g18670D
Coordinates
chrLK031957:+:140093..141307
Molecular Weight (calculated)
24453.6 Da
IEP (calculated)
4.242
GRAVY (calculated)
-0.340
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGMYGFHPT DGDYSDKAVL MMSPDNLMFP SDYQTLLCSS AGDNRVSDVF GSDELLSAAA SALSSEAASI APEIPRNDDK VSLGIIKGKI ASHPLYPRLL
101: QAYIDCQKVG APPEIACLLE EIQRESHVHK QNVVPSSSCF GADPELDEFM ETYCDILVKY KSDLARPFDE ATTFLNKIET QLRNLCTGVE SDRGLSEGYI
201: AGFHNFDSYD WELNDFKNPR S
101: QAYIDCQKVG APPEIACLLE EIQRESHVHK QNVVPSSSCF GADPELDEFM ETYCDILVKY KSDLARPFDE ATTFLNKIET QLRNLCTGVE SDRGLSEGYI
201: AGFHNFDSYD WELNDFKNPR S
001: MDRMCGFRST EDYSEKATLM MPSDYQSLIC STTGDNQRLF GSDELATALS SELLPRIRKA EDNFSLSVIK SKIASHPLYP RLLQTYIDCQ KVGAPMEIAC
101: ILEEIQRENH VYKRDVAPLS CFGADPELDE FMETYCDILV KYKTDLARPF DEATTFINKI EMQLQNLCTG PASATALSDD GAVSSDEELR EDDDIAADDS
201: QQRSNDRDLK DQLLRKFGSH ISSLKLEFSK KKKKGKLPRE ARQALLDWWN VHNKWPYPTE GDKISLAEET GLDQKQINNW FINQRKRHWK PSENMPFDMM
301: DDSNETFFTE
101: ILEEIQRENH VYKRDVAPLS CFGADPELDE FMETYCDILV KYKTDLARPF DEATTFINKI EMQLQNLCTG PASATALSDD GAVSSDEELR EDDDIAADDS
201: QQRSNDRDLK DQLLRKFGSH ISSLKLEFSK KKKKGKLPRE ARQALLDWWN VHNKWPYPTE GDKISLAEET GLDQKQINNW FINQRKRHWK PSENMPFDMM
301: DDSNETFFTE
Arabidopsis Description
KNAT2KNOTTED-like from Arabidopsis thaliana 2 [Source:TAIR;Acc:AT1G70510]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.