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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra024593.1-P Field mustard nucleus 86.88 91.87
CDY44142 Canola nucleus 97.29 91.49
CDY41448 Canola nucleus 77.38 82.21
KRG99387 Soybean nucleus 53.39 61.46
CDX91713 Canola nucleus 79.64 56.05
AT1G23380.2 Thale cress nucleus 81.0 54.41
CDY03742 Canola nucleus 66.97 45.26
CDY09448 Canola nucleus 66.52 44.95
VIT_01s0127g00210.t01 Wine grape nucleus 58.37 40.57
KRH45633 Soybean nucleus 57.92 39.88
KRH74562 Soybean nucleus 55.66 39.81
KRH69600 Soybean nucleus 53.85 38.64
Solyc05g005090.2.1 Tomato nucleus 47.51 32.81
PGSC0003DMT400035095 Potato nucleus 48.42 31.1
CDY68624 Canola nucleus 30.32 19.2
CDX83145 Canola nucleus 29.86 16.42
CDY12943 Canola nucleus 26.24 15.14
CDY19545 Canola nucleus 26.24 15.14
CDY69524 Canola nucleus 12.22 13.24
CDX88165 Canola nucleus 17.65 13.04
CDY45968 Canola nucleus 16.74 12.63
CDY64892 Canola nucleus 16.74 12.59
CDY66559 Canola nucleus 16.74 12.59
CDX70374 Canola nucleus 17.19 12.58
CDY70923 Canola nucleus 11.31 12.2
CDY05371 Canola nucleus 22.17 12.13
CDY05480 Canola nucleus 21.72 11.43
CDX78407 Canola nucleus 19.46 11.14
CDY51104 Canola nucleus 19.46 10.94
CDY34012 Canola nucleus 9.5 10.88
CDX85732 Canola nucleus 19.0 10.69
CDX68812 Canola nucleus 16.74 9.89
CDX75215 Canola nucleus 16.29 9.63
CDY13472 Canola nucleus 15.84 9.16
CDX80491 Canola nucleus 18.1 9.01
CDX72343 Canola nucleus 15.84 8.75
CDY41449 Canola nucleus 4.52 8.26
CDX93852 Canola nucleus 5.88 5.86
KRG99390 Soybean nucleus 1.36 2.29
Protein Annotations
MapMan:15.5.3.4GO:A0A078EUS5EnsemblPlants:CDY04722ProteinID:CDY04722ProteinID:CDY04722.1GO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634EnsemblPlantsGene:GSBRNA2T00119361001InterPro:KNOX1InterPro:KNOX2PFAM:PF03790PFAM:PF03791
PANTHER:PTHR11850PANTHER:PTHR11850:SF99SMART:SM01255SMART:SM01256UniParc:UPI0004EB3F30SEG:seg
Description
BnaC05g18670D
Coordinates
chrLK031957:+:140093..141307
Molecular Weight (calculated)
24453.6 Da
IEP (calculated)
4.242
GRAVY (calculated)
-0.340
Length
221 amino acids
Sequence
(BLAST)
001: MDGMYGFHPT DGDYSDKAVL MMSPDNLMFP SDYQTLLCSS AGDNRVSDVF GSDELLSAAA SALSSEAASI APEIPRNDDK VSLGIIKGKI ASHPLYPRLL
101: QAYIDCQKVG APPEIACLLE EIQRESHVHK QNVVPSSSCF GADPELDEFM ETYCDILVKY KSDLARPFDE ATTFLNKIET QLRNLCTGVE SDRGLSEGYI
201: AGFHNFDSYD WELNDFKNPR S
Best Arabidopsis Sequence Match ( AT1G70510.1 )
(BLAST)
001: MDRMCGFRST EDYSEKATLM MPSDYQSLIC STTGDNQRLF GSDELATALS SELLPRIRKA EDNFSLSVIK SKIASHPLYP RLLQTYIDCQ KVGAPMEIAC
101: ILEEIQRENH VYKRDVAPLS CFGADPELDE FMETYCDILV KYKTDLARPF DEATTFINKI EMQLQNLCTG PASATALSDD GAVSSDEELR EDDDIAADDS
201: QQRSNDRDLK DQLLRKFGSH ISSLKLEFSK KKKKGKLPRE ARQALLDWWN VHNKWPYPTE GDKISLAEET GLDQKQINNW FINQRKRHWK PSENMPFDMM
301: DDSNETFFTE
Arabidopsis Description
KNAT2KNOTTED-like from Arabidopsis thaliana 2 [Source:TAIR;Acc:AT1G70510]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.