CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024593.1-P	Field mustard	nucleus	88.94	100.0
CDY04722	Canola	nucleus	91.49	97.29
CDY41448	Canola	nucleus	73.19	82.69
KRG99387	Soybean	nucleus	48.94	59.9
CDX91713	Canola	nucleus	76.6	57.32
AT1G23380.2	Thale cress	nucleus	78.72	56.23
CDY09448	Canola	nucleus	62.98	45.26
CDY03742	Canola	nucleus	62.98	45.26
VIT_01s0127g00210.t01	Wine grape	nucleus	56.17	41.51
KRH74562	Soybean	nucleus	53.19	40.45
KRH45633	Soybean	nucleus	54.47	39.88
KRH69600	Soybean	nucleus	51.49	39.29
Solyc05g005090.2.1	Tomato	nucleus	44.68	32.81
PGSC0003DMT400035095	Potato	nucleus	46.38	31.69
CDY68624	Canola	nucleus	28.51	19.2
CDX83145	Canola	nucleus	28.94	16.92
CDY12943	Canola	nucleus	25.53	15.67
CDY19545	Canola	nucleus	25.53	15.67
CDY69524	Canola	nucleus	12.77	14.71
CDY70923	Canola	nucleus	11.91	13.66
CDX88165	Canola	nucleus	17.02	13.38
CDY66559	Canola	nucleus	16.6	13.27
CDY64892	Canola	nucleus	16.6	13.27
CDY45968	Canola	nucleus	16.17	12.97
CDX70374	Canola	nucleus	16.6	12.91
CDY05371	Canola	nucleus	21.28	12.38
CDY34012	Canola	nucleus	9.79	11.92
CDY05480	Canola	nucleus	20.85	11.67
CDX78407	Canola	nucleus	18.72	11.4
CDY51104	Canola	nucleus	18.72	11.2
CDX85732	Canola	nucleus	18.3	10.94
CDY41449	Canola	nucleus	5.53	10.74
CDX68812	Canola	nucleus	16.6	10.43
CDX75215	Canola	nucleus	16.17	10.16
CDY13472	Canola	nucleus	15.74	9.69
CDX72343	Canola	nucleus	15.74	9.25
CDX80491	Canola	nucleus	17.45	9.23
CDX93852	Canola	nucleus	6.38	6.76
KRG99390	Soybean	nucleus	2.55	4.58

Protein Annotations

MapMan:15.5.3.4	GO:A0A078I257	UniProt:A0A078I257	EnsemblPlants:CDY44142	ProteinID:CDY44142	ProteinID:CDY44142.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	EnsemblPlantsGene:GSBRNA2T00079597001	InterPro:KNOX1	InterPro:KNOX2	PFAM:PF03790
PFAM:PF03791	PANTHER:PTHR11850	PANTHER:PTHR11850:SF99	SMART:SM01255	SMART:SM01256	UniParc:UPI0004EEBA39
SEG:seg	:	:	:	:	:

Description

BnaA09g31100DBnaA09g31100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I257]

Coordinates

chrLK032580:-:123868..125455

Molecular Weight (calculated)

26115.8 Da

IEP (calculated)

4.296

GRAVY (calculated)

-0.201

Length

235 amino acids

Sequence
(BLAST)

001: MDGMYGFHPT DGDYSDKAVL MMSPDNLMFP SDYQTLLCSS AGDNRVSDVF GSDELLSAAA SALSSEAASI APEIPRNDDK VSLGVIKGKI ACHPLYPRLL
101: QAYIDCQKVG APPEIACLLE EIQRESHVHK QNVVPLSSSF GADPELDEFM ETYCDILVKY KSDLARPFDE ATTFLNKIEM QLRNLCTGVE SDRGLSEGYI
201: IGFHNFDSYD WELNDFKNPR SSKILILTFQ SLVAY

Best Arabidopsis Sequence Match ( AT1G23380.1 )
(BLAST)

001: MDGMYNFHSA GDYSDKSVLM MSPESLMFPS DYQALLCSSA GENRVSDVFG SDELLSVAVS ALSSEAASIA PEIRRNDDNV SLTVIKAKIA CHPSYPRLLQ
101: AYIDCQKVGA PPEIACLLEE IQRESDVYKQ EVVPSSCFGA DPELDEFMET YCDILVKYKS DLARPFDEAT CFLNKIEMQL RNLCTGVESA RGVSEDGVIS
201: SDEELSGGDH EVAEDGRQRC EDRDLKDRLL RKFGSRISTL KLEFSKKKKK GKLPREARQA LLDWWNLHYK WPYPTEGDKI ALADATGLDQ KQINNWFINQ
301: RKRHWKPSEN MPFAMMDDSS GSFFTEE

Arabidopsis Description

KNAT6KNOTTED1-like homeobox gene 6 [Source:TAIR;Acc:AT1G23380]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.