Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036636.1-P | Field mustard | nucleus | 99.66 | 99.66 |
| CDY66559 | Canola | nucleus | 99.32 | 99.32 |
| AT1G62990.1 | Thale cress | nucleus | 96.6 | 97.59 |
| CDY45968 | Canola | nucleus | 95.58 | 95.9 |
| CDX93852 | Canola | nucleus | 68.03 | 90.09 |
| KRH27981 | Soybean | nucleus | 78.57 | 82.8 |
| KRH77464 | Soybean | nucleus | 77.55 | 81.14 |
| VIT_02s0025g04630.t01 | Wine grape | nucleus | 78.91 | 79.73 |
| KRH03996 | Soybean | nucleus | 76.87 | 77.4 |
| KRH57265 | Soybean | nucleus | 76.87 | 77.13 |
| PGSC0003DMT400058528 | Potato | nucleus | 80.27 | 75.64 |
| Solyc08g080120.2.1 | Tomato | nucleus | 79.25 | 75.16 |
| GSMUA_Achr1P03660_001 | Banana | nucleus | 72.11 | 72.85 |
| Zm00001d027431_P002 | Maize | nucleus | 72.45 | 68.71 |
| Os03t0123500-02 | Rice | nucleus | 72.79 | 68.15 |
| TraesCS5A01G515000.1 | Wheat | nucleus | 71.09 | 66.99 |
| TraesCS4B01G346100.1 | Wheat | nucleus | 71.09 | 66.99 |
| TraesCS4D01G341000.1 | Wheat | nucleus | 70.41 | 66.56 |
| Zm00001d048471_P001 | Maize | nucleus | 71.77 | 66.35 |
| HORVU4Hr1G084680.1 | Barley | nucleus | 71.09 | 66.35 |
| KXG40306 | Sorghum | nucleus | 72.79 | 66.25 |
| CDX88165 | Canola | nucleus | 61.9 | 60.87 |
| CDX78407 | Canola | nucleus | 60.54 | 46.11 |
| CDY05371 | Canola | nucleus | 62.59 | 45.54 |
| CDX85732 | Canola | nucleus | 60.54 | 45.29 |
| CDY13472 | Canola | nucleus | 58.84 | 45.29 |
| CDX68812 | Canola | nucleus | 57.48 | 45.19 |
| CDX75215 | Canola | nucleus | 57.48 | 45.19 |
| CDY51104 | Canola | nucleus | 60.2 | 45.04 |
| CDY05480 | Canola | nucleus | 63.27 | 44.29 |
| CDX72343 | Canola | nucleus | 59.18 | 43.5 |
| CDX80491 | Canola | nucleus | 62.93 | 41.67 |
| CDY41449 | Canola | nucleus | 16.67 | 40.5 |
| CDX70374 | Canola | nucleus | 37.76 | 36.76 |
| CDY34012 | Canola | nucleus | 18.71 | 28.5 |
| CDY69524 | Canola | nucleus | 18.03 | 25.98 |
| CDX91713 | Canola | nucleus | 27.55 | 25.8 |
| CDY09448 | Canola | nucleus | 27.89 | 25.08 |
| CDY03742 | Canola | nucleus | 27.89 | 25.08 |
| CDY70923 | Canola | nucleus | 17.35 | 24.88 |
| CDX83145 | Canola | nucleus | 27.89 | 20.4 |
| CDY19545 | Canola | nucleus | 25.17 | 19.32 |
| CDY12943 | Canola | nucleus | 25.17 | 19.32 |
| CDY68624 | Canola | nucleus | 20.41 | 17.19 |
| CDY04722 | Canola | nucleus | 12.59 | 16.74 |
| CDY44142 | Canola | nucleus | 13.27 | 16.6 |
| CDY41448 | Canola | nucleus | 10.88 | 15.38 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.4 | GO:A0A078JHK6 | UniProt:A0A078JHK6 | EnsemblPlants:CDY64892 | ProteinID:CDY64892 |
| ProteinID:CDY64892.1 | InterPro:ELK_dom | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00043816001 | InterPro:Homeobox-like_sf |
| InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR005539 | InterPro:KNOX1 | InterPro:KNOX2 |
| PFAM:PF03790 | PFAM:PF03791 | PFAM:PF05920 | PFscan:PS50071 | PFscan:PS51213 | PANTHER:PTHR11850 |
| PANTHER:PTHR11850:SF74 | SMART:SM00389 | SMART:SM01255 | SMART:SM01256 | SUPFAM:SSF46689 | UniParc:UPI0004EE45C4 |
| SEG:seg | : | : | : | : | : |
Description
BnaA09g52990DBnaA09g52990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JHK6]
Coordinates
chrLK034592:+:18407..22134
Molecular Weight (calculated)
33105.2 Da
IEP (calculated)
6.614
GRAVY (calculated)
-0.590
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MQEAALGMIG ATVGGGGDGD AAVVAEQNRQ MKGEIATHPM YEQLLAAHVA CLRVATPIDQ LPIIEAQLSH SHHLLRSYAS TAVGFSHHDR QELDNFLAQY
101: VMVLCSFKEQ LQQHVRVHAV EAVMACREIE NNLHSLTGAT LGEGSGATMS EDEDDLHMDF SSDNSGVDFS GGHDMTGFGP LLPTESERSL MERVRQELKL
201: ELKQGFKSRI EDVREEIMRK RRAGKLPGDT TTVLKNWWQQ HCKWPYPTED DKAKLVEETG LQLKQINNWF INQRKRNWHN NSHSLTSLKS KRKH
101: VMVLCSFKEQ LQQHVRVHAV EAVMACREIE NNLHSLTGAT LGEGSGATMS EDEDDLHMDF SSDNSGVDFS GGHDMTGFGP LLPTESERSL MERVRQELKL
201: ELKQGFKSRI EDVREEIMRK RRAGKLPGDT TTVLKNWWQQ HCKWPYPTED DKAKLVEETG LQLKQINNWF INQRKRNWHN NSHSLTSLKS KRKH
001: MQEAALGMMG ATVGGDGDTA VVAEQNRQLK GEIATHPMYE QLLAAHVACL RVATPIDQLP IIEAQLSQSH HLLRSYASTA VGYHHDRHEL DNFLAQYVMV
101: LCSFKEQLQQ HVRVHAVEAV MACREIENNL HSLTGATLGE GSGATMSEDE DDLPMDFSSD NSGVDFSGGH DMTGFGPLLP TESERSLMER VRQELKLELK
201: QGFKSRIEDV REEIMRKRRA GKLPGDTTTV LKNWWQQHCK WPYPTEDDKA KLVEETGLQL KQINNWFINQ RKRNWHNNSH SLTSLKSKRK H
101: LCSFKEQLQQ HVRVHAVEAV MACREIENNL HSLTGATLGE GSGATMSEDE DDLPMDFSSD NSGVDFSGGH DMTGFGPLLP TESERSLMER VRQELKLELK
201: QGFKSRIEDV REEIMRKRRA GKLPGDTTTV LKNWWQQHCK WPYPTEDDKA KLVEETGLQL KQINNWFINQ RKRNWHNNSH SLTSLKSKRK H
Arabidopsis Description
KNAT7Homeobox protein knotted-1-like 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPQ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.