Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001976.1-P | Field mustard | nucleus | 100.0 | 85.14 |
| CDX71279 | Canola | nucleus | 83.33 | 81.19 |
| AT2G16400.1 | Thale cress | nucleus | 82.01 | 64.32 |
| CDY02261 | Canola | nucleus | 74.87 | 63.03 |
| CDX89711 | Canola | nucleus | 75.4 | 62.64 |
| CDX83753 | Canola | nucleus | 25.66 | 51.05 |
| GSMUA_Achr1P23300_001 | Banana | extracellular | 47.35 | 41.44 |
| CDX73171 | Canola | nucleus | 28.31 | 37.02 |
| CDY47523 | Canola | nucleus | 27.78 | 36.33 |
| GSMUA_Achr3P29230_001 | Banana | nucleus | 43.12 | 36.06 |
| CDY29411 | Canola | nucleus | 35.71 | 34.7 |
| CDY45321 | Canola | nucleus, plastid | 61.64 | 34.01 |
| GSMUA_Achr9P21580_001 | Banana | nucleus | 47.35 | 32.78 |
| CDY21826 | Canola | extracellular, plastid | 8.2 | 32.29 |
| GSMUA_Achr4P13590_001 | Banana | nucleus | 48.41 | 32.16 |
| CDX75307 | Canola | nucleus | 18.78 | 31.98 |
| CDY52073 | Canola | nucleus | 39.42 | 31.63 |
| CDY39031 | Canola | nucleus | 38.62 | 30.54 |
| CDX68129 | Canola | nucleus | 38.1 | 30.44 |
| VIT_03s0038g00050.t01 | Wine grape | nucleus | 55.03 | 30.1 |
| CDY63699 | Canola | nucleus | 32.8 | 29.67 |
| CDX73170 | Canola | nucleus | 40.21 | 29.57 |
| CDY47524 | Canola | nucleus | 40.21 | 29.46 |
| CDX96653 | Canola | nucleus | 39.15 | 29.25 |
| GSMUA_Achr4P06630_001 | Banana | nucleus | 43.12 | 28.8 |
| CDX85896 | Canola | nucleus | 38.1 | 28.63 |
| CDY45383 | Canola | nucleus | 19.05 | 27.38 |
| CDY39359 | Canola | nucleus | 37.57 | 27.36 |
| TraesCS4A01G289400.1 | Wheat | nucleus | 45.24 | 26.8 |
| TraesCS4D01G022600.1 | Wheat | nucleus | 44.97 | 26.65 |
| KXG24130 | Sorghum | nucleus | 46.3 | 26.6 |
| HORVU4Hr1G003800.7 | Barley | nucleus | 45.24 | 26.55 |
| TraesCS4B01G025500.1 | Wheat | nucleus | 44.71 | 26.45 |
| Zm00001d013547_P002 | Maize | nucleus | 44.71 | 26.45 |
| EER91079 | Sorghum | nucleus | 44.97 | 26.19 |
| Os12t0636200-01 | Rice | nucleus | 44.71 | 26.12 |
| Zm00001d031182_P002 | Maize | nucleus | 45.5 | 25.75 |
| Zm00001d033378_P003 | Maize | nucleus | 44.18 | 25.65 |
| Os03t0680800-02 | Rice | nucleus | 45.77 | 25.63 |
| CDX77099 | Canola | nucleus | 30.42 | 25.61 |
| CDY30566 | Canola | nucleus | 30.16 | 25.45 |
| HORVU5Hr1G001090.1 | Barley | nucleus | 43.65 | 25.42 |
| TraesCS5D01G013300.1 | Wheat | nucleus | 43.65 | 25.38 |
| TraesCS5A01G007800.1 | Wheat | nucleus | 43.65 | 25.38 |
| CDY40420 | Canola | nucleus | 41.8 | 25.0 |
| CDY32069 | Canola | nucleus | 41.53 | 24.69 |
| TraesCS5B01G006400.1 | Wheat | nucleus | 43.92 | 24.67 |
| CDX84171 | Canola | nucleus | 36.77 | 23.64 |
| CDX84585 | Canola | nucleus | 41.8 | 23.55 |
| CDX79646 | Canola | nucleus | 41.8 | 22.87 |
| CDX75085 | Canola | nucleus | 36.77 | 22.13 |
| CDX76849 | Canola | nucleus | 34.92 | 21.96 |
| GSMUA_Achr2P06420_001 | Banana | nucleus | 21.43 | 21.95 |
| CDY46061 | Canola | nucleus | 35.19 | 21.88 |
| CDY39669 | Canola | nucleus | 34.92 | 20.47 |
| CDY62523 | Canola | nucleus | 34.92 | 20.37 |
| CDY44476 | Canola | nucleus | 30.16 | 20.07 |
| CDX75604 | Canola | nucleus | 35.19 | 19.88 |
| CDY24765 | Canola | nucleus | 34.66 | 19.64 |
| CDX69252 | Canola | nucleus | 34.66 | 19.64 |
| CDY22463 | Canola | nucleus | 34.13 | 19.25 |
| CDX68927 | Canola | nucleus | 23.02 | 18.87 |
| CDY13511 | Canola | nucleus | 21.43 | 18.54 |
| CDY10473 | Canola | nucleus | 27.78 | 18.26 |
| CDX75313 | Canola | nucleus | 22.49 | 18.24 |
| CDY69132 | Canola | nucleus | 27.51 | 18.12 |
| CDY40327 | Canola | nucleus | 27.51 | 17.99 |
| CDY48107 | Canola | nucleus | 26.98 | 17.74 |
| CDX72383 | Canola | nucleus | 20.9 | 17.48 |
| CDX68925 | Canola | cytosol | 7.94 | 16.57 |
| CDY55113 | Canola | nucleus | 22.49 | 16.25 |
| CDX80798 | Canola | nucleus | 22.75 | 16.17 |
| CDX68906 | Canola | nucleus | 6.35 | 9.27 |
Protein Annotations
| EnsemblPlants:CDY46209 | EnsemblPlantsGene:GSBRNA2T00083421001 | Gene3D:1.10.10.60 | GO:A0A078IA50 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:POX_dom | ncoils:Coil | PANTHER:PTHR11850 |
| PANTHER:PTHR11850:SF65 | PFAM:PF07526 | ProteinID:CDY46209 | ProteinID:CDY46209.1 | SEG:seg | SMART:SM00574 |
| SUPFAM:SSF46689 | UniParc:UPI0004EEA043 | UniProt:A0A078IA50 | MapMan:15.5.3.5 | : | : |
Description
BnaA07g03610DBnaA07g03610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IA50]
Coordinates
chrLK032654:+:98061..99644
Molecular Weight (calculated)
42600.5 Da
IEP (calculated)
7.120
GRAVY (calculated)
-0.595
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MFEIQDSGSW RDQEDNDRNC FPVMMRPTTE QGLSLGLSSQ TETMRGNNNE YATEAVSGFT RTIHNSKYLK AAQELLGEAV NVKKALKQFQ PEGETINEEK
101: EYKLEESNRN PDIPQGERQE LQSKLTKLLS ILDEVDKRYK QYYHQMQIVV SSFDVIAGCG ATKPYTALSL QTISRHFRCV RDAISVQILV IRKSLGGEHG
201: GLDGKGVGIS RLRNVDQQVR QQRALQRLGV MQPHTWRPQR GLPDSSVLIL RAWLFEHFLH PGQVSNWFIN ARVRLWKPMV EEIYKEEFTD ALKESGPNLS
301: SRNTPATTEI QEQHQMESSS NNVVAISSMG QNSVAHAGDR FMMVTEMTRH GSGGMSLTLG IKNSDAHSDV SMSGVINN
101: EYKLEESNRN PDIPQGERQE LQSKLTKLLS ILDEVDKRYK QYYHQMQIVV SSFDVIAGCG ATKPYTALSL QTISRHFRCV RDAISVQILV IRKSLGGEHG
201: GLDGKGVGIS RLRNVDQQVR QQRALQRLGV MQPHTWRPQR GLPDSSVLIL RAWLFEHFLH PGQVSNWFIN ARVRLWKPMV EEIYKEEFTD ALKESGPNLS
301: SRNTPATTEI QEQHQMESSS NNVVAISSMG QNSVAHAGDR FMMVTEMTRH GSGGMSLTLG IKNSDAHSDV SMSGVINN
001: MATYYKTGSS EIYSRPEFVP GNAMNYTNSF TETFPRDSTN NVSPSKEIQV LSSLGGVSQM VEIQDSGSWR DQEDNDRNRF PVMRRLGLSS QIETSRGNNN
101: NEYATQVVSG FTRTIHNSKY LKAAQELLDE TVNVKKALKQ FQPEGDKINE VKEKNLQTNT AEIPQAERQE LQSKLSKLLS ILDEVDRNYK QYYHQMQIVV
201: SSFDVIAGCG AAKPYTALAL QTISRHFRCL RDAISGQILV IRKSLGGEQD GSDGRGVGIS RLRNVDQQVR QQRALQRLGV MQPHTWRPQR GLPDSSVLVL
301: RAWLFEHFLH PYPKDSDKIM LARQTGLSRG QVSNWFINAR VRLWKPMVEE MYKEEFTDAL QENDPNQSSE NTPEITEIQE LQTESSSNNG HVPGVASSSM
401: RQNTVAHGGD RFMMVTDMTR NGNGGMSLTL GIQNSDARGD VPMSGGIDNY KNTISGTDLQ YLNSRNHQHQ IGSSQLLHDF VA
101: NEYATQVVSG FTRTIHNSKY LKAAQELLDE TVNVKKALKQ FQPEGDKINE VKEKNLQTNT AEIPQAERQE LQSKLSKLLS ILDEVDRNYK QYYHQMQIVV
201: SSFDVIAGCG AAKPYTALAL QTISRHFRCL RDAISGQILV IRKSLGGEQD GSDGRGVGIS RLRNVDQQVR QQRALQRLGV MQPHTWRPQR GLPDSSVLVL
301: RAWLFEHFLH PYPKDSDKIM LARQTGLSRG QVSNWFINAR VRLWKPMVEE MYKEEFTDAL QENDPNQSSE NTPEITEIQE LQTESSSNNG HVPGVASSSM
401: RQNTVAHGGD RFMMVTDMTR NGNGGMSLTL GIQNSDARGD VPMSGGIDNY KNTISGTDLQ YLNSRNHQHQ IGSSQLLHDF VA
Arabidopsis Description
BLH7BEL1-like homeodomain protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIW1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.