Factsheet for HORVU5Hr1G001090.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G061320.3
HORVU4Hr1G003360.1
HORVU4Hr1G003410.3
HORVU4Hr1G009730.1
HORVU4Hr1G084680.1
HORVU5Hr1G098570.6
HORVU6Hr1G028610.2
HORVU7Hr1G114650.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G16400.1	HORVU4Hr1G084680.1	AT1G62990.1	15781858
AT2G16400.1	HORVU2Hr1G061320.3	AT4G08150.1	15781858
AT2G16400.1	HORVU4Hr1G003360.1	AT4G08150.1	15781858
AT2G16400.1	HORVU4Hr1G003410.3	AT4G08150.1	15781858
AT2G16400.1	HORVU4Hr1G009730.1	AT4G08150.1	15781858
AT2G16400.1	HORVU5Hr1G098570.6	AT4G08150.1	15781858
AT2G16400.1	HORVU2Hr1G061320.3	AT4G08150.1	21798944
AT2G16400.1	HORVU4Hr1G003360.1	AT4G08150.1	21798944
AT2G16400.1	HORVU4Hr1G003410.3	AT4G08150.1	21798944
AT2G16400.1	HORVU4Hr1G009730.1	AT4G08150.1	21798944
AT2G16400.1	HORVU5Hr1G098570.6	AT4G08150.1	21798944
AT2G16400.1	HORVU6Hr1G028610.2	AT4G32040.1	15781858
AT2G16400.1	HORVU7Hr1G114650.2	AT4G32040.1	15781858
AT2G16400.1	HORVU6Hr1G028610.2	AT5G25220.1	15781858
AT2G16400.1	HORVU7Hr1G114650.2	AT5G25220.1	15781858

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G007800.1	Wheat	nucleus	96.15	96.0
TraesCS5D01G013300.1	Wheat	nucleus	95.99	95.85
TraesCS5B01G006400.1	Wheat	nucleus	95.38	91.98
Os12t0636200-01	Rice	nucleus	86.29	86.55
KXG24130	Sorghum	nucleus	84.28	83.13
Zm00001d031182_P002	Maize	nucleus	75.35	73.2
HORVU4Hr1G003800.7	Barley	nucleus	69.65	70.19
GSMUA_Achr1P23300_001	Banana	extracellular	36.36	54.63
GSMUA_Achr9P21580_001	Banana	nucleus	41.76	49.63
CDY02261	Canola	nucleus	32.67	47.22
Bra013076.1-P	Field mustard	nucleus	32.67	47.11
CDX89711	Canola	nucleus	32.97	47.03
Bra013075.1-P	Field mustard	nucleus	30.66	46.71
GSMUA_Achr4P13590_001	Banana	nucleus	40.83	46.57
GSMUA_Achr3P29230_001	Banana	nucleus	31.74	45.58
AT2G16400.1	Thale cress	nucleus	33.59	45.23
GSMUA_Achr4P06630_001	Banana	nucleus	39.14	44.88
CDY46209	Canola	nucleus	25.42	43.65
Bra017666.1-P	Field mustard	nucleus	34.82	42.8
Bra001976.1-P	Field mustard	nucleus	29.12	42.57
VIT_03s0038g00050.t01	Wine grape	nucleus	45.3	42.55
AT4G34610.3	Thale cress	nucleus	34.51	42.11
HORVU3Hr1G072010.1	Barley	mitochondrion	8.01	40.62
HORVU4Hr1G074250.1	Barley	nucleus	36.36	40.07
CDX71279	Canola	nucleus	21.88	36.6
HORVU4Hr1G003750.1	Barley	nucleus	17.26	32.75
HORVU4Hr1G020710.1	Barley	nucleus	25.73	32.12
CDY45321	Canola	nucleus, plastid	31.74	30.07
GSMUA_Achr2P06420_001	Banana	nucleus	15.87	27.91
HORVU1Hr1G049760.1	Barley	nucleus	24.81	27.01
HORVU4Hr1G084590.2	Barley	nucleus	23.57	24.6
HORVU4Hr1G010430.6	Barley	nucleus	28.81	23.11
HORVU1Hr1G072850.1	Barley	nucleus, plastid	21.11	17.25
HORVU3Hr1G085720.1	Barley	nucleus, plastid	19.72	17.0
HORVU7Hr1G088090.4	Barley	nucleus	12.79	14.98

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.5	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU5Hr1G001090
EnsemblPlants:HORVU5Hr1G001090.1	InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356	UniProt:M0WS12
PFAM:PF05920	PFAM:PF07526	InterPro:POX_dom	PFscan:PS50071	PANTHER:PTHR11850	PANTHER:PTHR11850:SF191
SMART:SM00389	SMART:SM00574	SUPFAM:SSF46689	UniParc:UPI0002948F11	SEG:seg	:

Description

No Description!

Coordinates

chrchr5H:+:3761222..3766508

Molecular Weight (calculated)

72146.5 Da

IEP (calculated)

6.164

GRAVY (calculated)

-0.730

Length

649 amino acids

Sequence
(BLAST)

001: MATYYSSPGS ERESQDMYSR DPGNASYPMS SALGNLLYLN NNPSSGPYTA EFGGILQTQQ NFMEMPGHGH HPAMSQDSSA RESHDMLASH HGQRPFGHVK
101: DMKDEMLMHM MDGARSGGGE LIHDDPHNGA QFEFGVLNNH DSSDVPVGQG QGLSLSLNTQ ILAPSLPYWS IKPDMLTPNS YQESLRIDDI RMKNMQSEAS
201: RAIRHSRYLK AAQEVLDEVV NVWKNIKRKA QKEQAEPGKA DGKESDGGPK SEGASQESGA NAAPELSTAE KQELQNKMAK LMAMLDEVDR KYKHYYHQMQ
301: NVVASFDMVA GPGSAKPYTA VALQTISRHF RCLKDAINDQ INVIRKKLGE EENSSGKEGK LTRLRYIDQQ LRQQRAFQQY GMIPQNAWRP QRGLPENSVT
401: VLRAWLFEHF LHPYPKDSEK LMLARQTGLT RSQISNWFIN ARVRLWKPMI EDMYKEETGD LEQDSNSSSD NVPRSKNKVA SSEENEDLKN ARARVCETSQ
501: LSESRASIGT MIVGAAPVGF QHAEANPDDS FMNLMMKEQR SGEADGGLLL HNAVAQHSDE NARFMAYHLA ELGRYGNGNV SLTLGLQHPG SGLSVPNAQA
601: HFPGVGDDDI YNAGAPLGVG IASSDYESLN QMDQRQRFEQ SPLLHDFVA

Best Arabidopsis Sequence Match ( AT2G16400.1 )
(BLAST)

001: MATYYKTGSS EIYSRPEFVP GNAMNYTNSF TETFPRDSTN NVSPSKEIQV LSSLGGVSQM VEIQDSGSWR DQEDNDRNRF PVMRRLGLSS QIETSRGNNN
101: NEYATQVVSG FTRTIHNSKY LKAAQELLDE TVNVKKALKQ FQPEGDKINE VKEKNLQTNT AEIPQAERQE LQSKLSKLLS ILDEVDRNYK QYYHQMQIVV
201: SSFDVIAGCG AAKPYTALAL QTISRHFRCL RDAISGQILV IRKSLGGEQD GSDGRGVGIS RLRNVDQQVR QQRALQRLGV MQPHTWRPQR GLPDSSVLVL
301: RAWLFEHFLH PYPKDSDKIM LARQTGLSRG QVSNWFINAR VRLWKPMVEE MYKEEFTDAL QENDPNQSSE NTPEITEIQE LQTESSSNNG HVPGVASSSM
401: RQNTVAHGGD RFMMVTDMTR NGNGGMSLTL GIQNSDARGD VPMSGGIDNY KNTISGTDLQ YLNSRNHQHQ IGSSQLLHDF VA

Arabidopsis Description

BLH7BEL1-like homeodomain protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIW1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.