Factsheet for HORVU3Hr1G085720.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 2
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G072850.1
HORVU2Hr1G061320.3
HORVU3Hr1G072010.1
HORVU3Hr1G085720.1
HORVU4Hr1G003360.1
HORVU4Hr1G003410.3
HORVU4Hr1G009730.1
HORVU5Hr1G098570.6
HORVU6Hr1G028610.2
HORVU7Hr1G114650.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G02030.1	HORVU2Hr1G061320.3	AT4G08150.1	12897247
AT5G02030.1	HORVU4Hr1G003360.1	AT4G08150.1	12897247
AT5G02030.1	HORVU4Hr1G003410.3	AT4G08150.1	12897247
AT5G02030.1	HORVU4Hr1G009730.1	AT4G08150.1	12897247
AT5G02030.1	HORVU5Hr1G098570.6	AT4G08150.1	12897247
AT5G02030.1	HORVU2Hr1G061320.3	AT4G08150.1	15019989
AT5G02030.1	HORVU4Hr1G003360.1	AT4G08150.1	15019989
AT5G02030.1	HORVU4Hr1G003410.3	AT4G08150.1	15019989
AT5G02030.1	HORVU4Hr1G009730.1	AT4G08150.1	15019989
AT5G02030.1	HORVU5Hr1G098570.6	AT4G08150.1	15019989
AT5G02030.1	HORVU2Hr1G061320.3	AT4G08150.1	15781858
AT5G02030.1	HORVU4Hr1G003360.1	AT4G08150.1	15781858
AT5G02030.1	HORVU4Hr1G003410.3	AT4G08150.1	15781858
AT5G02030.1	HORVU4Hr1G009730.1	AT4G08150.1	15781858
AT5G02030.1	HORVU5Hr1G098570.6	AT4G08150.1	15781858
AT5G02030.1	HORVU6Hr1G028610.2	AT4G32040.1	15781858
AT5G02030.1	HORVU7Hr1G114650.2	AT4G32040.1	15781858
AT5G02030.1	HORVU1Hr1G072850.1	AT5G02030.1	15781858
AT5G02030.1	HORVU3Hr1G072010.1	AT5G02030.1	15781858
AT5G02030.1	HORVU3Hr1G085720.1	AT5G02030.1	15781858
AT5G02030.1	HORVU6Hr1G028610.2	AT5G25220.1	15781858
AT5G02030.1	HORVU7Hr1G114650.2	AT5G25220.1	15781858

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G072010.1	Barley	mitochondrion	17.0	100.0
TraesCS3D01G357400.1	Wheat	nucleus	54.85	66.29
TraesCS3B01G396100.1	Wheat	nucleus	54.32	65.97
TraesCS3A01G363900.1	Wheat	nucleus	54.85	65.76
GSMUA_Achr10P...	Banana	nucleus	8.5	62.75
Zm00001d042864_P002	Maize	nucleus	39.71	50.94
EES03882	Sorghum	nucleus	39.71	50.42
Os01t0848400-01	Rice	nucleus	40.77	50.16
Solyc10g086640.1.1	Tomato	nucleus	15.27	44.57
GSMUA_Achr7P14960_001	Banana	nucleus	24.97	42.73
GSMUA_Achr10P...	Banana	plastid	5.05	39.18
GSMUA_Achr5P07020_001	Banana	nucleus	26.03	37.33
HORVU1Hr1G072850.1	Barley	nucleus, plastid	36.79	34.89
PGSC0003DMT400062353	Potato	nucleus	21.65	32.28
Solyc09g011380.2.1	Tomato	nucleus	21.51	32.14
KRH00065	Soybean	nucleus	23.37	30.72
VIT_08s0007g01290.t01	Wine grape	nucleus	25.9	30.37
PGSC0003DMT400049235	Potato	nucleus	22.71	29.74
AT5G02030.1	Thale cress	nucleus	22.58	29.57
KRH65931	Soybean	nucleus	24.17	29.5
KRH75724	Soybean	nucleus	23.64	29.23
CDY10473	Canola	nucleus	21.91	28.7
Bra005703.1-P	Field mustard	nucleus	21.51	28.42
CDY40327	Canola	nucleus	21.78	28.37
Bra009618.1-P	Field mustard	nucleus	22.05	28.33
Bra028883.1-P	Field mustard	nucleus	21.91	28.25
CDY48107	Canola	nucleus	21.51	28.17
CDY69132	Canola	nucleus	21.38	28.05
CDY55113	Canola	nucleus	17.8	25.62
CDX80798	Canola	nucleus	17.93	25.38
VIT_13s0019g02450.t01	Wine grape	nucleus	16.2	24.5
HORVU1Hr1G049760.1	Barley	nucleus	19.26	24.33
HORVU4Hr1G003750.1	Barley	nucleus	10.76	23.68
HORVU4Hr1G084590.2	Barley	nucleus	18.06	21.86
HORVU4Hr1G074250.1	Barley	nucleus	16.47	21.05
HORVU4Hr1G020710.1	Barley	nucleus	13.94	20.19
HORVU5Hr1G001090.1	Barley	nucleus	17.0	19.72
HORVU4Hr1G003800.7	Barley	nucleus	15.14	17.7
HORVU4Hr1G010430.6	Barley	nucleus	17.53	16.32
HORVU7Hr1G088090.4	Barley	nucleus	9.3	12.64

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.5	UniProt:A0A287M219	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU3Hr1G085720
EnsemblPlants:HORVU3Hr1G085720.1	InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356	PFAM:PF05920
PFAM:PF07526	InterPro:POX_dom	PFscan:PS50071	PANTHER:PTHR11850	PANTHER:PTHR11850:SF91	SMART:SM00389
SMART:SM00574	SUPFAM:SSF46689	UniParc:UPI000B460525	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr3H:-:613897934..613902856

Molecular Weight (calculated)

81768.3 Da

IEP (calculated)

12.289

GRAVY (calculated)

-0.797

Length

753 amino acids

Sequence
(BLAST)

001: PLSLSRLLTV SPSPGTDRAS LSFSPPPLAF GARTQPQQPS GEPRRRKEGE RAREGEIKGE GREGKGRLQQ RRQRVGDTIP PAGSATASQA RRSESAEPFP
101: LHLHSLQGQR GHPPQPGAGA PALPRCAARH PPTAYVRAGA RHVVSRRRVR RRRGPPPRPH AASQPCTPHG GRRRRVGRAA LPRAAAQPPR EAPVPAGRRR
201: GGLTADPPRP APPAPPGRGV ASPGLLLLRV LLLLLLTAQP HGAAGPAAGA QRAHRPAGHR AAVPAHPHAQ LLALPLLRLV QSRHGAPDAQ EAAGAGRRRA
301: VRSLHRLRLG ARAIQVPRPG AEAAGGDLRR GRRGRARRPQ PPGRGPARRR HDGRRRRRAG RRRPHVRRRA AVEEDEAHLH DGREVCKRYR QYYQQVQSAI
401: ASFETVAGFS NAAPFTALAL RVMAKHFKTI KEMILSQLRN TSKMPVKGSS MSKDITIFGL GGGGGAPVGG FQRGSSVNGF GQPHNIWRPQ RGLPERSVTV
501: LRAWLFEHFL HPYPTDGDKQ MLAKQTGLTR NQVSNWFINA RVRLWKPMVE EIHNLEMRQV HKQSPHDNGS QHGVHGHAHQ PSSQQQQQQR SGKRSEPCDS
601: HLGQCSGVTR NHHHHSNPAA SSHGGGFPDD LSQMSHSMQQ GQVTFAGYGA LPSQSQQHQH QHQHSSMASP QHPHHQHHVG AAGAGNGGGV SLTLGLHQNN
701: RVCFGEPLPA NLAHRFGLED VVSDPYVMGS FGGGQDRHFA KEIGGHLLHD FVG

Best Arabidopsis Sequence Match ( AT4G34610.1 )
(BLAST)

001: MENYPETQFI PGDSMIQNAI VSYSEESAGR ERRTEANNVS ASQERQALSR FGGVPQMQNI GQDFGSWRDQ ASDRNGFQLM SAMAGATGIL QTGQGLSLSL
101: GSQILPGIHQ ISHQNMAPRG NEYATQSFPG GNQNLDVVRT IPNSKYLKAA QQLLDEAVNV KKALKQFQAE GDKNNENPQE PNQSTQDSST NPPADISQSE
201: RQEMQSKLTK LLSMLDEVDR RYKQYYQQMQ IVVSSFDVIA GYGAAKPYTA LALQTISRHF RSLRDAISGQ ILVLRKCLGE QQDGSDGKRV GIISRLKYVD
301: QHLRQQRGFM QPQAWRPQRG LPENSVLILR AWLFEHFLHP YPKDSDKIML ARQTGLSRGQ VSNWFINARV RLWKPMVEEI YKEEFTENDS NSSSENTPKM
401: SEIGPVAADD EDRAREFSQD QTKPDHGHGY GEETRGMVQG SHMDGRRFMA VEPTYHVADT SRLGRGDVSL TLGLQNSQGQ DNVVAMSSEA YNNFSGVDIY
501: ENAIPGDEME YVNPGSRQNR INSSQLVHDF VA

Arabidopsis Description

BLH6BEL1-like homeodomain protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O65685]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.