Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G357400.1 | Wheat | nucleus | 96.45 | 95.99 |
| TraesCS3A01G363900.1 | Wheat | nucleus | 96.61 | 95.38 |
| HORVU3Hr1G072010.1 | Barley | mitochondrion | 18.71 | 90.62 |
| Os01t0848400-01 | Rice | nucleus | 70.32 | 71.24 |
| EES03882 | Sorghum | nucleus | 67.1 | 70.15 |
| Zm00001d042864_P002 | Maize | nucleus | 65.97 | 69.68 |
| TraesCS1B01G290200.1 | Wheat | nucleus | 60.16 | 64.31 |
| GSMUA_Achr10P... | Banana | nucleus | 10.32 | 62.75 |
| HORVU3Hr1G085720.1 | Barley | nucleus, plastid | 65.97 | 54.32 |
| GSMUA_Achr7P14960_001 | Banana | nucleus | 38.39 | 54.09 |
| Solyc10g086640.1.1 | Tomato | nucleus | 20.16 | 48.45 |
| GSMUA_Achr5P07020_001 | Banana | nucleus | 39.03 | 46.1 |
| GSMUA_Achr10P... | Banana | plastid | 7.1 | 45.36 |
| PGSC0003DMT400062353 | Potato | nucleus | 33.23 | 40.79 |
| Solyc09g011380.2.1 | Tomato | nucleus | 33.06 | 40.67 |
| AT5G02030.1 | Thale cress | nucleus | 34.68 | 37.39 |
| VIT_08s0007g01290.t01 | Wine grape | nucleus | 38.71 | 37.38 |
| KRH00065 | Soybean | nucleus | 34.35 | 37.17 |
| KRH65931 | Soybean | nucleus | 36.77 | 36.95 |
| KRH75724 | Soybean | nucleus | 36.13 | 36.78 |
| CDY48107 | Canola | nucleus | 33.87 | 36.52 |
| Bra028883.1-P | Field mustard | nucleus | 34.35 | 36.47 |
| CDY69132 | Canola | nucleus | 33.71 | 36.41 |
| CDY10473 | Canola | nucleus | 33.55 | 36.17 |
| Bra005703.1-P | Field mustard | nucleus | 33.06 | 35.96 |
| CDY40327 | Canola | nucleus | 33.39 | 35.81 |
| Bra009618.1-P | Field mustard | nucleus | 33.71 | 35.67 |
| PGSC0003DMT400049235 | Potato | nucleus | 32.9 | 35.48 |
| CDY55113 | Canola | nucleus | 28.39 | 33.65 |
| CDX80798 | Canola | nucleus | 28.06 | 32.71 |
| VIT_13s0019g02450.t01 | Wine grape | nucleus | 23.71 | 29.52 |
| TraesCS1B01G191800.1 | Wheat | nucleus | 25.32 | 26.84 |
| TraesCS4B01G025400.1 | Wheat | nucleus | 14.84 | 24.66 |
| TraesCS4B01G345600.1 | Wheat | nucleus | 24.19 | 24.55 |
| TraesCS4B01G114600.1 | Wheat | nucleus | 25.48 | 23.87 |
| TraesCS4B01G280700.1 | Wheat | nucleus | 22.58 | 23.81 |
| TraesCS4B01G063100.1 | Wheat | nucleus, plastid | 26.77 | 22.4 |
| TraesCS4B01G025500.1 | Wheat | nucleus | 22.58 | 21.91 |
| TraesCS5B01G006400.1 | Wheat | nucleus | 22.9 | 21.1 |
| TraesCS7B01G269400.1 | Wheat | nucleus | 14.35 | 16.12 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF05920 | PFAM:PF07526 |
| InterPro:POX_dom | PFscan:PS50071 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF91 | SMART:SM00389 | SMART:SM00574 |
| SUPFAM:SSF46689 | EnsemblPlantsGene:TraesCS3B01G396100 | EnsemblPlants:TraesCS3B01G396100.1 | TIGR:cd00086 | SEG:seg | : |
Description
No Description!
Coordinates
chr3B:-:624316945..624321196
Molecular Weight (calculated)
66650.1 Da
IEP (calculated)
8.169
GRAVY (calculated)
-0.569
Length
620 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSPAGGYGG AEAHHQQQHH GHMLLHNHAH HMAAAAAAAA ASGGQLYHVP QHSRREKLRF PPDAAAEDPP LTPLAQHHHH QQQHQAGAWP PPAFYSYASS
101: SSSYSPHSPT VPQGQQLVLN GLTAQQVTAQ QFPQIPTQNF SLSLSSASSN PATTPPAPRK QEPGAAAPAA GPYGPFTGYA TVLGRSRFLG PAQKLLEEIC
201: DVGGAAAHVD TSVPDEGLLD ADPMDGADDA AGHELDTSGP MSGAEQQWKK TRLISMMEEV CKRYRQYYQQ VQAVIASFES VAGFSNAAPF TALALRVMAR
301: HFRCIKGMIL SQLRNTSKMP VKEGMSKDIT IFGLGGGGAP VGGFQRGGSV NGFGQPHNIW RPQRGLPERS VTVLRAWLFE HFLHPYPTDG DKQMLAKQTG
401: LTRNQVSNWF INARVRLWKP MVEEIHNLEM RQVHKHSPHD KGQLGVHGQT HQHSSQQQQQ RSGKRSEPCD SHPGQSSGVT RNHHHHHNAA AAASSHGGGF
501: PDDLSQMSHS MQQGQVTFAG YGALPSPQQH GSMSSPQHHH QHHVVGGGAG HAGGGGGVSL TLGLHQNNRV CFGEPLPANL AHRFGLEDVV SDPYVMGSFG
601: GQDRHFAKEI GGHLLHDFVG
101: SSSYSPHSPT VPQGQQLVLN GLTAQQVTAQ QFPQIPTQNF SLSLSSASSN PATTPPAPRK QEPGAAAPAA GPYGPFTGYA TVLGRSRFLG PAQKLLEEIC
201: DVGGAAAHVD TSVPDEGLLD ADPMDGADDA AGHELDTSGP MSGAEQQWKK TRLISMMEEV CKRYRQYYQQ VQAVIASFES VAGFSNAAPF TALALRVMAR
301: HFRCIKGMIL SQLRNTSKMP VKEGMSKDIT IFGLGGGGAP VGGFQRGGSV NGFGQPHNIW RPQRGLPERS VTVLRAWLFE HFLHPYPTDG DKQMLAKQTG
401: LTRNQVSNWF INARVRLWKP MVEEIHNLEM RQVHKHSPHD KGQLGVHGQT HQHSSQQQQQ RSGKRSEPCD SHPGQSSGVT RNHHHHHNAA AAASSHGGGF
501: PDDLSQMSHS MQQGQVTFAG YGALPSPQQH GSMSSPQHHH QHHVVGGGAG HAGGGGGVSL TLGLHQNNRV CFGEPLPANL AHRFGLEDVV SDPYVMGSFG
601: GQDRHFAKEI GGHLLHDFVG
001: MDMIKPDFQQ IRRDKFRVEQ MNDFPNTWTQ QQHQNIRIPN NLDLIGILQN QISVPVQTDL YQDSAATFMN MPQSIHRDPQ GPSNWRISDL SQPSTVNHGY
101: DQAGIRPNNV ADLLSDHFSS RNQILDRPLY VGRDSIPQSS MIRRSEVSCL DDNQKGCVTV ACSGTGNEIL RSSYDQGSSS GSYRGEFSFL PSLENQSVAH
201: NASNWNHGPV NVTATSHTNS KKGFPLSLLS DIPPSRDVGN AAVLSTMNIH GPLGPFTGYA SILKSSRFLE PAQKMLEEFC ISYASKIISR SESTSMEDDD
301: DDDDNLSGFS SSSEPLEPKN RLKKAKLLFL QEEVCKWYKL YNHQLQTVMS SFNTVAGLNT ATPYISLALK RTSRSFKALR TAIAEHVKQI SSHSSNGNNN
401: NRFQKRQRSL IGNNVGFESQ QQHIWRPQRG LPERAVAVLR AWLFDHFLHP YPTDSDKQML ATQTGLSRNQ VSNWFINARV RLWKPMVEEI HTLETKAIKN
501: ADTSHNIEPS NRPNTVSSPS HEQTLTGLSG TKRSRLEYMD MVGFNRGNVS LTLELRRGVD NVIQTQTQDH QFGTGSQMFH DFVG
101: DQAGIRPNNV ADLLSDHFSS RNQILDRPLY VGRDSIPQSS MIRRSEVSCL DDNQKGCVTV ACSGTGNEIL RSSYDQGSSS GSYRGEFSFL PSLENQSVAH
201: NASNWNHGPV NVTATSHTNS KKGFPLSLLS DIPPSRDVGN AAVLSTMNIH GPLGPFTGYA SILKSSRFLE PAQKMLEEFC ISYASKIISR SESTSMEDDD
301: DDDDNLSGFS SSSEPLEPKN RLKKAKLLFL QEEVCKWYKL YNHQLQTVMS SFNTVAGLNT ATPYISLALK RTSRSFKALR TAIAEHVKQI SSHSSNGNNN
401: NRFQKRQRSL IGNNVGFESQ QQHIWRPQRG LPERAVAVLR AWLFDHFLHP YPTDSDKQML ATQTGLSRNQ VSNWFINARV RLWKPMVEEI HTLETKAIKN
501: ADTSHNIEPS NRPNTVSSPS HEQTLTGLSG TKRSRLEYMD MVGFNRGNVS LTLELRRGVD NVIQTQTQDH QFGTGSQMFH DFVG
Arabidopsis Description
BLH8BEL1-like homeodomain protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJJ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.