Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005703.1-P | Field mustard | nucleus | 86.78 | 87.54 |
| CDY55113 | Canola | nucleus | 79.13 | 87.0 |
| CDY48107 | Canola | nucleus | 86.78 | 86.78 |
| Bra009618.1-P | Field mustard | nucleus | 88.35 | 86.69 |
| CDY10473 | Canola | nucleus | 86.61 | 86.61 |
| Bra028883.1-P | Field mustard | nucleus | 87.65 | 86.3 |
| CDY69132 | Canola | nucleus | 86.09 | 86.24 |
| CDY40327 | Canola | nucleus | 86.61 | 86.16 |
| CDX80798 | Canola | nucleus | 79.3 | 85.71 |
| Solyc10g086640.1.1 | Tomato | nucleus | 25.39 | 56.59 |
| GSMUA_Achr10P... | Banana | nucleus | 9.22 | 51.96 |
| Solyc09g011380.2.1 | Tomato | nucleus | 43.83 | 50.0 |
| PGSC0003DMT400062353 | Potato | nucleus | 43.65 | 49.7 |
| HORVU3Hr1G072010.1 | Barley | mitochondrion | 10.78 | 48.44 |
| KRH00065 | Soybean | nucleus | 47.65 | 47.82 |
| VIT_08s0007g01290.t01 | Wine grape | nucleus | 53.22 | 47.66 |
| KRH75724 | Soybean | nucleus | 49.39 | 46.63 |
| KRH65931 | Soybean | nucleus | 48.7 | 45.38 |
| GSMUA_Achr10P... | Banana | plastid | 7.48 | 44.33 |
| PGSC0003DMT400049235 | Potato | nucleus | 42.61 | 42.61 |
| GSMUA_Achr7P14960_001 | Banana | nucleus | 30.43 | 39.77 |
| TraesCS1B01G290200.1 | Wheat | nucleus | 37.74 | 37.41 |
| TraesCS1D01G280300.1 | Wheat | nucleus | 37.22 | 37.35 |
| TraesCS1A01G281100.1 | Wheat | nucleus | 37.04 | 37.11 |
| Os05t0455200-01 | Rice | nucleus | 37.22 | 36.9 |
| EES18336 | Sorghum | nucleus | 36.17 | 36.49 |
| Zm00001d038355_P001 | Maize | nucleus | 36.17 | 36.11 |
| Os01t0848400-01 | Rice | nucleus | 38.26 | 35.95 |
| Zm00001d042864_P002 | Maize | nucleus | 36.17 | 35.43 |
| EES03882 | Sorghum | nucleus | 36.52 | 35.41 |
| Zm00001d010060_P001 | Maize | nucleus | 34.61 | 34.73 |
| TraesCS3B01G396100.1 | Wheat | nucleus | 37.39 | 34.68 |
| TraesCS3D01G357400.1 | Wheat | nucleus | 37.22 | 34.35 |
| GSMUA_Achr5P07020_001 | Banana | nucleus | 31.13 | 34.1 |
| TraesCS3A01G363900.1 | Wheat | nucleus | 37.22 | 34.08 |
| AT1G75430.1 | Thale cress | nucleus | 15.83 | 31.38 |
| AT2G27990.1 | Thale cress | nucleus | 29.04 | 28.6 |
| AT2G16400.1 | Thale cress | nucleus | 22.96 | 27.39 |
| HORVU1Hr1G072850.1 | Barley | nucleus, plastid | 37.74 | 27.33 |
| AT2G27220.2 | Thale cress | nucleus | 20.7 | 26.5 |
| AT4G34610.3 | Thale cress | nucleus | 24.35 | 26.32 |
| AT1G19700.3 | Thale cress | nucleus | 22.96 | 24.54 |
| AT5G41410.1 | Thale cress | nucleus | 25.57 | 24.06 |
| AT1G75410.2 | Thale cress | nucleus | 21.91 | 24.05 |
| AT2G35940.3 | Thale cress | nucleus | 26.96 | 22.79 |
| HORVU3Hr1G085720.1 | Barley | nucleus, plastid | 29.57 | 22.58 |
| AT2G23760.4 | Thale cress | nucleus | 25.74 | 21.8 |
| AT4G36870.2 | Thale cress | nucleus | 26.96 | 20.97 |
| AT4G32980.1 | Thale cress | nucleus | 14.09 | 17.12 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.5 | EntrezGene:831745 | ProteinID:AED90423.1 | EMBL:AJ519491 | ArrayExpress:AT5G02030 |
| EnsemblPlantsGene:AT5G02030 | RefSeq:AT5G02030 | TAIR:AT5G02030 | RefSeq:AT5G02030-TAIR-G | EnsemblPlants:AT5G02030.1 | TAIR:AT5G02030.1 |
| EMBL:AY084243 | EMBL:AY328314 | Unigene:At.4802 | EMBL:BT000779 | EMBL:BT020537 | ProteinID:CAB82976.1 |
| GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0007389 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009653 | GO:GO:0009791 | GO:GO:0009908 |
| GO:GO:0009987 | GO:GO:0010051 | GO:GO:0010076 | GO:GO:0010077 | GO:GO:0010089 | GO:GO:0010154 |
| GO:GO:0010223 | GO:GO:0010228 | GO:GO:0043565 | GO:GO:0045892 | GO:GO:0048367 | GO:GO:0048457 |
| GO:GO:0080006 | GO:GO:1905393 | InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 |
| Symbol:LSN | RefSeq:NP_195823.1 | PFAM:PF05920 | PFAM:PF07526 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008016 | PO:PO:0008019 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025272 | PO:PO:0025281 | InterPro:POX_dom |
| PFscan:PS50071 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF82 | UniProt:Q9LZM8 | SMART:SM00389 | SMART:SM00574 |
| SUPFAM:SSF46689 | UniParc:UPI00000A5BD9 | SEG:seg | : | : | : |
Description
BLH9BEL1-like homeodomain protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZM8]
Coordinates
chr5:+:395567..399125
Molecular Weight (calculated)
62010.1 Da
IEP (calculated)
7.944
GRAVY (calculated)
-0.521
Length
575 amino acids
Sequence
(BLAST)
(BLAST)
001: MADAYEPYHV LQQSRRDKLR IPSLDSHFHF HPPPPPSSGG GGGVFPLADS DFLAAGGFHS NNNNNHISNP SYSNFMGFLG GPSSSSSTAV AVAGDHSFNA
101: GLSSGDVLVF KPEPLSLSLS SHPRLAYDLV VPGVVNSGFC RSAGEANAAA VTIASRSSGP LGPFTGYASI LKGSRFLKPA QMLLDEFCNV GRGIYTDKVI
201: DDDDSSLLFD PTVENLCGVS DGGGGDNGKK KSKLISMLDE VYKRYKQYYE QLQAVMGSFE CVAGLGHAAP YANLALKALS KHFKCLKNAI TDQLQFSHNN
301: KIQQQQQCGH PMNSENKTDS LRFGGSDSSR GLCSAGQRHG FPDHHAPVWR PHRGLPERAV TVLRAWLFDH FLHPYPTDTD KLMLAKQTGL SRNQVSNWFI
401: NARVRVWKPM VEEIHMLETR QSQRSSSSSW RDERTSTTVF PDNSNNNPSS SSAQQRPNNS SPPRRARNDD VHGTNNNNSY VNSGSGGGSA VGFSYGIGSS
501: NVPVMNSSTN GGVSLTLGLH HQIGLPEPFP MTTAQRFGLD GGSGDGGGGY EGQNRQFGRD FIGGSNHQFL HDFVG
101: GLSSGDVLVF KPEPLSLSLS SHPRLAYDLV VPGVVNSGFC RSAGEANAAA VTIASRSSGP LGPFTGYASI LKGSRFLKPA QMLLDEFCNV GRGIYTDKVI
201: DDDDSSLLFD PTVENLCGVS DGGGGDNGKK KSKLISMLDE VYKRYKQYYE QLQAVMGSFE CVAGLGHAAP YANLALKALS KHFKCLKNAI TDQLQFSHNN
301: KIQQQQQCGH PMNSENKTDS LRFGGSDSSR GLCSAGQRHG FPDHHAPVWR PHRGLPERAV TVLRAWLFDH FLHPYPTDTD KLMLAKQTGL SRNQVSNWFI
401: NARVRVWKPM VEEIHMLETR QSQRSSSSSW RDERTSTTVF PDNSNNNPSS SSAQQRPNNS SPPRRARNDD VHGTNNNNSY VNSGSGGGSA VGFSYGIGSS
501: NVPVMNSSTN GGVSLTLGLH HQIGLPEPFP MTTAQRFGLD GGSGDGGGGY EGQNRQFGRD FIGGSNHQFL HDFVG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.