Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY10473 | Canola | nucleus | 97.58 | 98.09 |
| Bra009618.1-P | Field mustard | nucleus | 99.13 | 97.78 |
| CDY48107 | Canola | nucleus | 86.16 | 86.61 |
| AT5G02030.1 | Thale cress | nucleus | 86.16 | 86.61 |
| CDY69132 | Canola | nucleus | 85.29 | 85.89 |
| CDY55113 | Canola | nucleus | 77.16 | 85.28 |
| CDX80798 | Canola | nucleus | 76.99 | 83.65 |
| Solyc10g086640.1.1 | Tomato | nucleus | 24.91 | 55.81 |
| GSMUA_Achr10P... | Banana | nucleus | 9.69 | 54.9 |
| Solyc09g011380.2.1 | Tomato | nucleus | 42.39 | 48.61 |
| PGSC0003DMT400062353 | Potato | nucleus | 41.7 | 47.72 |
| KRH00065 | Soybean | nucleus | 47.06 | 47.47 |
| KRH75724 | Soybean | nucleus | 49.13 | 46.63 |
| VIT_08s0007g01290.t01 | Wine grape | nucleus | 51.73 | 46.57 |
| HORVU3Hr1G072010.1 | Barley | mitochondrion | 10.03 | 45.31 |
| KRH65931 | Soybean | nucleus | 48.27 | 45.22 |
| GSMUA_Achr10P... | Banana | plastid | 7.27 | 43.3 |
| CDX83753 | Canola | nucleus | 14.01 | 42.63 |
| PGSC0003DMT400049235 | Potato | nucleus | 41.7 | 41.91 |
| GSMUA_Achr7P14960_001 | Banana | nucleus | 30.45 | 40.0 |
| TraesCS1D01G280300.1 | Wheat | nucleus | 37.02 | 37.35 |
| TraesCS1B01G290200.1 | Wheat | nucleus | 37.37 | 37.24 |
| TraesCS1A01G281100.1 | Wheat | nucleus | 36.85 | 37.11 |
| Os05t0455200-01 | Rice | nucleus | 36.85 | 36.72 |
| EES18336 | Sorghum | nucleus | 35.81 | 36.32 |
| Os01t0848400-01 | Rice | nucleus | 37.89 | 35.78 |
| Zm00001d038355_P001 | Maize | nucleus | 35.29 | 35.42 |
| Zm00001d042864_P002 | Maize | nucleus | 35.81 | 35.26 |
| EES03882 | Sorghum | nucleus | 35.99 | 35.08 |
| CDY21826 | Canola | extracellular, plastid | 5.71 | 34.38 |
| Zm00001d010060_P001 | Maize | nucleus | 33.91 | 34.21 |
| GSMUA_Achr5P07020_001 | Banana | nucleus | 30.8 | 33.9 |
| TraesCS3B01G396100.1 | Wheat | nucleus | 35.81 | 33.39 |
| TraesCS3D01G357400.1 | Wheat | nucleus | 35.81 | 33.23 |
| TraesCS3A01G363900.1 | Wheat | nucleus | 35.81 | 32.96 |
| CDX73171 | Canola | nucleus | 16.44 | 32.87 |
| CDY47523 | Canola | nucleus | 16.44 | 32.87 |
| CDY45383 | Canola | nucleus | 14.71 | 32.32 |
| CDY29411 | Canola | nucleus | 21.11 | 31.36 |
| CDY02261 | Canola | nucleus | 22.32 | 28.73 |
| CDY52073 | Canola | nucleus | 23.18 | 28.45 |
| CDX89711 | Canola | nucleus | 22.32 | 28.35 |
| CDY39031 | Canola | nucleus | 23.18 | 28.03 |
| CDX75307 | Canola | nucleus | 10.73 | 27.93 |
| CDY46209 | Canola | nucleus | 17.99 | 27.51 |
| HORVU1Hr1G072850.1 | Barley | nucleus, plastid | 37.54 | 27.33 |
| CDY63699 | Canola | nucleus | 19.72 | 27.27 |
| CDY30566 | Canola | nucleus | 20.76 | 26.79 |
| CDX68129 | Canola | nucleus | 21.63 | 26.43 |
| CDX77099 | Canola | nucleus | 20.24 | 26.06 |
| CDX73170 | Canola | nucleus | 23.01 | 25.88 |
| CDY47524 | Canola | nucleus | 22.84 | 25.58 |
| CDY39359 | Canola | nucleus | 22.66 | 25.24 |
| CDX76849 | Canola | nucleus | 25.95 | 24.96 |
| CDX96653 | Canola | nucleus | 21.8 | 24.9 |
| CDY44476 | Canola | nucleus | 24.39 | 24.82 |
| CDX71279 | Canola | nucleus | 16.61 | 24.74 |
| CDY46061 | Canola | nucleus | 25.95 | 24.67 |
| CDX85896 | Canola | nucleus | 21.28 | 24.45 |
| CDY39669 | Canola | nucleus | 26.47 | 23.72 |
| CDY32069 | Canola | nucleus | 25.95 | 23.58 |
| CDY40420 | Canola | nucleus | 25.78 | 23.58 |
| CDX84171 | Canola | nucleus | 23.88 | 23.47 |
| CDX69252 | Canola | nucleus | 26.99 | 23.39 |
| CDX75604 | Canola | nucleus | 26.99 | 23.32 |
| CDY62523 | Canola | nucleus | 26.12 | 23.3 |
| CDY24765 | Canola | nucleus | 26.47 | 22.94 |
| CDY22463 | Canola | nucleus | 26.12 | 22.54 |
| CDX84585 | Canola | nucleus | 25.61 | 22.06 |
| CDX75085 | Canola | nucleus | 23.7 | 21.82 |
| HORVU3Hr1G085720.1 | Barley | nucleus, plastid | 28.37 | 21.78 |
| CDX79646 | Canola | nucleus | 25.78 | 21.56 |
| CDY13511 | Canola | nucleus | 13.49 | 17.85 |
| CDX75313 | Canola | nucleus | 14.36 | 17.81 |
| CDX68927 | Canola | nucleus | 13.84 | 17.35 |
| CDY45321 | Canola | nucleus, plastid | 20.42 | 17.23 |
| CDX72383 | Canola | nucleus | 13.15 | 16.81 |
| CDX68925 | Canola | cytosol | 3.63 | 11.6 |
| CDX68906 | Canola | nucleus | 3.98 | 8.88 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.5 | GO:A0A078HR61 | UniProt:A0A078HR61 | EnsemblPlants:CDY40327 | ProteinID:CDY40327 |
| ProteinID:CDY40327.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00069510001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain |
| InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF05920 | PFAM:PF07526 | InterPro:POX_dom | PFscan:PS50071 |
| PANTHER:PTHR11850 | PANTHER:PTHR11850:SF82 | SMART:SM00389 | SMART:SM00574 | SUPFAM:SSF46689 | UniParc:UPI0004EF32DD |
| SEG:seg | : | : | : | : | : |
Description
BnaA10g27410DBnaA10g27410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HR61]
Coordinates
chrLK032468:+:136616..140225
Molecular Weight (calculated)
62498.6 Da
IEP (calculated)
7.612
GRAVY (calculated)
-0.476
Length
578 amino acids
Sequence
(BLAST)
(BLAST)
001: MADAYEPYHV LQQSRRDKLR IPSLDSHFHF HHPHPPSSSG GGAGVYPLGD SDYLAAGGFH SNNNSHISNP SYSNFMGFLG GPSSSSSNAV AVAGDQSFHD
101: GLSSGDVLVF KPEPLSLSLS SHPRLTYDLV VPGVVNSGYG RSAAEAAAAT VTVASRSSGP LGPFTGYASI LKGSRFLKPA QILLDEFCSV GHGIYTDKNI
201: DGDDSSLLFD PTVESLCGAS DSGGGEFMKN KSKLISMLDE VYKRYKQYYE QLQAVMGSFE CVAGLGHAAP YASLTLKALS RHFKCLKNAI TEQLQFSTNN
301: KIQQQQSGHL MISENRTESM RFGGSDSSRG LCSAGQRHGF PDNHAPVWRP HRGLPERAVT VLRAWLFDHF LHPYPTDTDK LMLAKQTGLS RNQVSNWFIN
401: ARVRVWKPMV EEIHMLETRQ SQRSSSSSWR DERNTTTVFP DNNNNPSSST AQQRANNNSS PARRVQNDDV HATTTNNNNN NFMNAGNSGS GGAVAFSYGI
501: ASSNVAGMSS STNGGVSLTL GLHHQIGLPE PFPMTTAQRF GLEGVSSGGG GESYVQNRQF GRDFIGGSNP QFLHDFVG
101: GLSSGDVLVF KPEPLSLSLS SHPRLTYDLV VPGVVNSGYG RSAAEAAAAT VTVASRSSGP LGPFTGYASI LKGSRFLKPA QILLDEFCSV GHGIYTDKNI
201: DGDDSSLLFD PTVESLCGAS DSGGGEFMKN KSKLISMLDE VYKRYKQYYE QLQAVMGSFE CVAGLGHAAP YASLTLKALS RHFKCLKNAI TEQLQFSTNN
301: KIQQQQSGHL MISENRTESM RFGGSDSSRG LCSAGQRHGF PDNHAPVWRP HRGLPERAVT VLRAWLFDHF LHPYPTDTDK LMLAKQTGLS RNQVSNWFIN
401: ARVRVWKPMV EEIHMLETRQ SQRSSSSSWR DERNTTTVFP DNNNNPSSST AQQRANNNSS PARRVQNDDV HATTTNNNNN NFMNAGNSGS GGAVAFSYGI
501: ASSNVAGMSS STNGGVSLTL GLHHQIGLPE PFPMTTAQRF GLEGVSSGGG GESYVQNRQF GRDFIGGSNP QFLHDFVG
001: MADAYEPYHV LQQSRRDKLR IPSLDSHFHF HPPPPPSSGG GGGVFPLADS DFLAAGGFHS NNNNNHISNP SYSNFMGFLG GPSSSSSTAV AVAGDHSFNA
101: GLSSGDVLVF KPEPLSLSLS SHPRLAYDLV VPGVVNSGFC RSAGEANAAA VTIASRSSGP LGPFTGYASI LKGSRFLKPA QMLLDEFCNV GRGIYTDKVI
201: DDDDSSLLFD PTVENLCGVS DGGGGDNGKK KSKLISMLDE VYKRYKQYYE QLQAVMGSFE CVAGLGHAAP YANLALKALS KHFKCLKNAI TDQLQFSHNN
301: KIQQQQQCGH PMNSENKTDS LRFGGSDSSR GLCSAGQRHG FPDHHAPVWR PHRGLPERAV TVLRAWLFDH FLHPYPTDTD KLMLAKQTGL SRNQVSNWFI
401: NARVRVWKPM VEEIHMLETR QSQRSSSSSW RDERTSTTVF PDNSNNNPSS SSAQQRPNNS SPPRRARNDD VHGTNNNNSY VNSGSGGGSA VGFSYGIGSS
501: NVPVMNSSTN GGVSLTLGLH HQIGLPEPFP MTTAQRFGLD GGSGDGGGGY EGQNRQFGRD FIGGSNHQFL HDFVG
101: GLSSGDVLVF KPEPLSLSLS SHPRLAYDLV VPGVVNSGFC RSAGEANAAA VTIASRSSGP LGPFTGYASI LKGSRFLKPA QMLLDEFCNV GRGIYTDKVI
201: DDDDSSLLFD PTVENLCGVS DGGGGDNGKK KSKLISMLDE VYKRYKQYYE QLQAVMGSFE CVAGLGHAAP YANLALKALS KHFKCLKNAI TDQLQFSHNN
301: KIQQQQQCGH PMNSENKTDS LRFGGSDSSR GLCSAGQRHG FPDHHAPVWR PHRGLPERAV TVLRAWLFDH FLHPYPTDTD KLMLAKQTGL SRNQVSNWFI
401: NARVRVWKPM VEEIHMLETR QSQRSSSSSW RDERTSTTVF PDNSNNNPSS SSAQQRPNNS SPPRRARNDD VHGTNNNNSY VNSGSGGGSA VGFSYGIGSS
501: NVPVMNSSTN GGVSLTLGLH HQIGLPEPFP MTTAQRFGLD GGSGDGGGGY EGQNRQFGRD FIGGSNHQFL HDFVG
Arabidopsis Description
BLH9BEL1-like homeodomain protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZM8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.