Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29411 | Canola | nucleus | 88.42 | 43.19 |
| CDY21826 | Canola | extracellular, plastid | 18.42 | 36.46 |
| CDY63699 | Canola | nucleus | 78.95 | 35.89 |
| CDX96653 | Canola | nucleus | 91.58 | 34.39 |
| CDY39359 | Canola | nucleus | 90.0 | 32.95 |
| CDY52073 | Canola | nucleus | 79.47 | 32.06 |
| CDY39031 | Canola | nucleus | 78.95 | 31.38 |
| AT1G19700.3 | Thale cress | nucleus | 86.84 | 30.67 |
| CDX68129 | Canola | nucleus | 76.32 | 30.66 |
| CDX73170 | Canola | nucleus | 80.53 | 29.77 |
| CDX85896 | Canola | nucleus | 78.42 | 29.62 |
| CDY47524 | Canola | nucleus | 80.0 | 29.46 |
| CDX75307 | Canola | nucleus | 34.21 | 29.28 |
| CDY47523 | Canola | nucleus | 42.11 | 27.68 |
| CDX73171 | Canola | nucleus | 41.58 | 27.34 |
| CDY46209 | Canola | nucleus | 51.05 | 25.66 |
| CDY02261 | Canola | nucleus | 57.37 | 24.28 |
| CDX89711 | Canola | nucleus | 56.84 | 23.74 |
| CDY45383 | Canola | nucleus | 32.63 | 23.57 |
| KRH05875 | Soybean | nucleus | 58.95 | 18.33 |
| KRH51792 | Soybean | nucleus | 60.53 | 18.05 |
| KRH61114 | Soybean | nucleus | 61.05 | 17.96 |
| KRH15136 | Soybean | nucleus | 60.0 | 17.92 |
| CDX77099 | Canola | nucleus | 42.11 | 17.82 |
| CDY30566 | Canola | nucleus | 41.58 | 17.63 |
| Solyc04g080790.2.1 | Tomato | nucleus | 61.05 | 17.55 |
| PGSC0003DMT400009610 | Potato | nucleus | 60.53 | 17.4 |
| CDX71279 | Canola | nucleus | 35.26 | 17.27 |
| CDY40420 | Canola | nucleus | 55.26 | 16.61 |
| CDY32069 | Canola | nucleus | 55.26 | 16.51 |
| CDX84171 | Canola | nucleus | 50.0 | 16.16 |
| CDY45321 | Canola | nucleus, plastid | 57.37 | 15.91 |
| CDX76849 | Canola | nucleus | 49.47 | 15.64 |
| CDY46061 | Canola | nucleus | 50.0 | 15.62 |
| VIT_18s0001g13150.t01 | Wine grape | nucleus | 57.37 | 15.62 |
| CDX84585 | Canola | nucleus | 54.74 | 15.5 |
| CDY44476 | Canola | nucleus | 45.26 | 15.14 |
| CDX79646 | Canola | nucleus | 54.74 | 15.05 |
| CDX75085 | Canola | nucleus | 49.47 | 14.97 |
| CDX68925 | Canola | cytosol | 14.21 | 14.92 |
| CDX69252 | Canola | nucleus | 51.58 | 14.69 |
| CDY24765 | Canola | nucleus | 51.58 | 14.69 |
| CDX75604 | Canola | nucleus | 51.58 | 14.65 |
| CDY13511 | Canola | nucleus | 33.68 | 14.65 |
| CDY22463 | Canola | nucleus | 51.58 | 14.63 |
| CDY39669 | Canola | nucleus | 49.47 | 14.57 |
| CDX68927 | Canola | nucleus | 35.26 | 14.53 |
| CDY62523 | Canola | nucleus | 49.47 | 14.51 |
| CDX75313 | Canola | nucleus | 34.74 | 14.16 |
| CDX72383 | Canola | nucleus | 33.68 | 14.16 |
| CDY69132 | Canola | nucleus | 42.63 | 14.11 |
| CDY10473 | Canola | nucleus | 42.63 | 14.09 |
| CDY40327 | Canola | nucleus | 42.63 | 14.01 |
| CDY48107 | Canola | nucleus | 42.11 | 13.91 |
| CDY55113 | Canola | nucleus | 30.53 | 11.09 |
| CDX80798 | Canola | nucleus | 30.53 | 10.9 |
| CDX68906 | Canola | nucleus | 5.26 | 3.86 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.5 | GO:A0A078D8U0 | EnsemblPlants:CDX83753 | ProteinID:CDX83753 | ProteinID:CDX83753.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00139490001 |
| InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF05920 | PFAM:PF07526 |
| InterPro:POX_dom | PFscan:PS50071 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF65 | SMART:SM00389 | SMART:SM00574 |
| SUPFAM:SSF46689 | UniParc:UPI0004EEB02F | SEG:seg | : | : | : |
Description
BnaC08g18920D
Coordinates
chrLK031834:+:251481..252338
Molecular Weight (calculated)
22265.6 Da
IEP (calculated)
9.959
GRAVY (calculated)
-0.772
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MERQELQSKK DKLLTMLDEV DKRYNQYYHQ MEALASSFEV VAGFGSAKPY TSVALNRISC HFRSLRDAIK EHIQVIREKL GEKGGELSLD EQQGGERIPI
101: LRYLDQRLRQ QRTFHQQIGM VRPSWRPQRG LPESFVSGLR AWLFEHFLHP YPKESEKMML AKQIRLSKNQ VANWFINARS PNSTNQEDSS
101: LRYLDQRLRQ QRTFHQQIGM VRPSWRPQRG LPESFVSGLR AWLFEHFLHP YPKESEKMML AKQIRLSKNQ VANWFINARS PNSTNQEDSS
001: MAVYYTSNVG CYQQEPIFLN HQQQNQQASS SSAAASFTVT GGDTVRNEMV FIPPTTTGDV VTGNGTVSSS DLSFHDGQGL SLSLGTQISV APFHFHQYQL
101: GFTSQNPSIS VKETSPFHVD EMSVKSKEMI LLGQSDPSSG YAGNGGNGFY NNYRYNETSG GFMSSVLRSR YLKPAQNLLD EVVSVKKELN QMGKKKMKVN
201: DFNSGSKEIE GGGGELSSDS NGKSIELSTI EREELQNKKN KLLTMVDEVD KRYNQYYHQM EALASSFEIV AGLGSAKPYT SVALNRISRH FRALRDAIKE
301: QIQIVREKLG EKGGESLDEQ QGERIPRLRY LDQRLRQQRA LHQQLGMVRP AWRPQRGLPE NSVSVLRAWL FEHFLHPYPK ESEKIMLAKQ TGLSKNQVAN
401: WFINARVRLW KPMIEEMYKE EFGDESELLI SKSSQEPNST NQEDSSSQQQ QQQENNNNSN LAYSSADTTN IVFSSETKPD RVLGNDNDPQ QQQINRSSDY
501: DTLMNYHGFG VDDYRYISGS NQQESRFSNS HHLHDFVV
101: GFTSQNPSIS VKETSPFHVD EMSVKSKEMI LLGQSDPSSG YAGNGGNGFY NNYRYNETSG GFMSSVLRSR YLKPAQNLLD EVVSVKKELN QMGKKKMKVN
201: DFNSGSKEIE GGGGELSSDS NGKSIELSTI EREELQNKKN KLLTMVDEVD KRYNQYYHQM EALASSFEIV AGLGSAKPYT SVALNRISRH FRALRDAIKE
301: QIQIVREKLG EKGGESLDEQ QGERIPRLRY LDQRLRQQRA LHQQLGMVRP AWRPQRGLPE NSVSVLRAWL FEHFLHPYPK ESEKIMLAKQ TGLSKNQVAN
401: WFINARVRLW KPMIEEMYKE EFGDESELLI SKSSQEPNST NQEDSSSQQQ QQQENNNNSN LAYSSADTTN IVFSSETKPD RVLGNDNDPQ QQQINRSSDY
501: DTLMNYHGFG VDDYRYISGS NQQESRFSNS HHLHDFVV
Arabidopsis Description
BLH10BEL1-like homeodomain protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXG8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.