Factsheet for Solyc04g080790.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400009610	Potato	nucleus	96.22	96.22
CDX83753	Canola	nucleus	17.55	61.05
CDY29411	Canola	nucleus	26.17	44.47
Bra025758.1-P	Field mustard	nucleus	26.02	44.22
Bra008197.1-P	Field mustard	nucleus	30.71	43.47
CDY52073	Canola	nucleus	30.86	43.31
CDY39031	Canola	nucleus	31.16	43.1
Bra003753.1-P	Field mustard	nucleus	29.95	41.86
CDX68129	Canola	nucleus	29.95	41.86
CDX73170	Canola	nucleus	32.07	41.25
Solyc10g086640.1.1	Tomato	nucleus	16.04	41.09
CDY47524	Canola	nucleus	31.77	40.7
Bra015845.1-P	Field mustard	nucleus	31.62	40.27
AT1G75410.2	Thale cress	nucleus	31.47	39.69
CDY63699	Canola	nucleus	24.96	39.47
CDX85896	Canola	nucleus	29.65	38.97
Bra016497.1-P	Field mustard	nucleus	29.2	38.6
AT1G19700.3	Thale cress	nucleus	31.01	38.1
CDX96653	Canola	nucleus	29.05	37.94
CDY39359	Canola	nucleus	29.2	37.19
KRH15136	Soybean	nucleus	35.7	37.11
VIT_18s0001g13150.t01	Wine grape	nucleus	39.03	36.96
KRH05875	Soybean	nucleus	34.04	36.82
KRH51792	Soybean	nucleus	35.1	36.42
KRH61114	Soybean	nucleus	35.1	35.91
Solyc01g109980.2.1	Tomato	nucleus	34.49	35.35
Solyc04g080780.2.1	Tomato	nucleus	20.73	34.25
Solyc06g074120.2.1	Tomato	nucleus	32.98	31.19
Solyc01g007070.2.1	Tomato	nucleus	32.53	30.71
Solyc11g068950.1.1	Tomato	nucleus	30.41	30.41
Solyc09g011380.2.1	Tomato	nucleus	22.09	28.97
Solyc08g081400.2.1	Tomato	nucleus	25.57	26.24
Solyc11g069890.1.1	Tomato	golgi	22.39	25.52
Solyc02g065490.2.1	Tomato	nucleus	22.84	24.2
Solyc04g079830.2.1	Tomato	nucleus	24.05	22.98
Solyc02g089940.2.1	Tomato	nucleus	25.11	22.86
Solyc08g065420.2.1	Tomato	nucleus	16.19	19.14

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.5	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain
InterPro:Homeobox_dom	InterPro:IPR001356	UniProt:K4BVF8	PFAM:PF05920	PFAM:PF07526	InterPro:POX_dom
PFscan:PS50071	PANTHER:PTHR11850	PANTHER:PTHR11850:SF65	SMART:SM00389	SMART:SM00574	SUPFAM:SSF46689
EnsemblPlantsGene:Solyc04g080790.2	EnsemblPlants:Solyc04g080790.2.1	UniParc:UPI0002765A8B	SEG:seg	:	:

Description

No Description!

Coordinates

chr4:-:64871066..64874431

Molecular Weight (calculated)

73898.3 Da

IEP (calculated)

6.000

GRAVY (calculated)

-0.620

Length

661 amino acids

Sequence
(BLAST)

001: MSAYYSNLSN QREVLPMSFL PDQKFASYQS TGLSDSPVHL NQHSASVSYS ELPSQNYSEV QTLKGKDEML FIPPTSESGG MQPIGRAVNA VPNFLENSVM
101: MDPHSFPIKQ LLVPNGEQSL QNQGLSLSLG TQVPPSLHVY SYQDDYTNSS LSSLVGTHVL HSDQGSENKE SKVAEYLSFD LAGGSRAANN PQSSMTLREL
201: NSGVHSHVGS GAAAAIYNSK YLKAAQDLLD EVVNVQEALK QSDKLRNFNL LSHDRSEEAD FKSSSSATGI SDDHNNSTKG ELSATERHDL ESKMTKLFSM
301: LDEVDRRYKE YYQQMQVVVS SFEMVAGLGA AKPYTSLALK TISRQFRCLR DAIKKQIQVT RRSLGEQGDS QGERLYRLRY VDQQLRQQRS LQQFGMMRQP
401: WRPQRGLPET AVSVLRAWLF EHFLHPYPKD SEKIMLARQT GLTRSQVANW FINARVRLWK PMIEDMYKEE FGVAEAGSGA SPERVAVDSK EKSIAENTGE
501: DIPESFTIPA ANCSHLDPSD ESSNIVTNVH NNSFTTKFSF QDGDYEHDRI DCGSNKLQSE QIPIAHRFGP KPTSDGSIIG PVNTYHPSML GDIMGNQVSL
601: ALRLQNSQMD QQPISGRPQL RQDEKTDSTH VDISKGEYYY IDPVNQQERF SGSHLLSDFV V

Best Arabidopsis Sequence Match ( AT1G75410.1 )
(BLAST)

001: MAVYYPNSVG MQSLYQESIY LNEQQQQQQQ ASSSSAASFS EIVSGDVRNN EMVFIPPTSD VAVNGNVTVS SNDLSFHGGG LSLSLGNQIQ SAVSVSPFQY
101: HYQNLSNQLS YNNLNPSTMS DENGKSLSVH QHHSDQILPS SVYNNNGNNG VGFYNNYRYE TSGFVSSVLR SRYLKPTQQL LDEVVSVRKD LKLGNKKMKN
201: DKGQDFHNGS SDNITEDDKS QSQELSPSER QELQSKKSKL LTMVDEVDKR YNQYHHQMEA LASSFEMVTG LGAAKPYTSV ALNRISRHFR CLRDAIKEQI
301: QVIRGKLGER ETSDEQGERI PRLRYLDQRL RQQRALHQQL GMVRPAWRPQ RGLPENSVSI LRAWLFEHFL HPYPKESEKI MLSKQTGLSK NQVANWFINA
401: RVRLWKPMIE EMYKEEFGES AELLSNSNQD TKKMQETSQL KHEDSSSSQQ QNQGNNNNNI PYTSDAEQNL VFADPKPDRA TTGDYDSLMN YHGFGIDDYN
501: RYVGLGNQQD GRYSNPHQLH DFVV

Arabidopsis Description

BLH3BEL1-like homeodomain protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWS9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.