Factsheet for Solyc02g089940.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400026172	Potato	nucleus	96.14	94.58
Bra032147.1-P	Field mustard	nucleus	27.41	62.19
KRH28575	Soybean	nucleus	59.09	60.85
KRH76894	Soybean	nucleus	58.95	60.28
GSMUA_Achr5P08840_001	Banana	nucleus	25.9	59.31
GSMUA_Achr4P14670_001	Banana	nucleus	23.69	57.91
Solyc02g065490.2.1	Tomato	nucleus	49.59	57.69
KRH69971	Soybean	nucleus	53.31	57.42
VIT_04s0023g01020.t01	Wine grape	nucleus	65.84	56.5
GSMUA_Achr4P07450_001	Banana	nucleus	23.55	56.44
KRH08329	Soybean	nucleus	60.33	56.37
GSMUA_Achr1P26900_001	Banana	nucleus	30.58	55.78
CDX76849	Canola	nucleus	43.66	52.75
CDY46061	Canola	nucleus	43.66	52.14
Bra039212.1-P	Field mustard	nucleus	43.39	51.81
CDY39669	Canola	nucleus	45.18	50.85
CDY62523	Canola	nucleus	45.04	50.46
GSMUA_Achr7P27440_001	Banana	nucleus	46.42	49.27
AT2G23760.4	Thale cress	nucleus	45.59	48.75
Solyc04g079830.2.1	Tomato	nucleus	43.94	46.1
Solyc10g086640.1.1	Tomato	nucleus	16.12	45.35
TraesCS4B01G063100.1	Wheat	nucleus, plastid	46.28	45.34
EER93512	Sorghum	nucleus, plastid	47.8	45.06
Zm00001d033898_P002	Maize	nucleus	46.42	44.64
TraesCS4A01G252100.2	Wheat	nucleus	46.56	43.84
Os03t0732100-01	Rice	nucleus	46.97	43.16
TraesCS4D01G062100.1	Wheat	nucleus	46.42	41.97
HORVU4Hr1G010430.6	Barley	nucleus	46.14	41.41
Solyc09g011380.2.1	Tomato	nucleus	22.86	32.94
Solyc08g081400.2.1	Tomato	nucleus	27.82	31.37
Solyc04g080780.2.1	Tomato	nucleus	16.94	30.75
Solyc01g109980.2.1	Tomato	nucleus	24.79	27.91
Solyc11g069890.1.1	Tomato	golgi	21.9	27.41
Solyc11g068950.1.1	Tomato	nucleus	24.24	26.63
Solyc06g074120.2.1	Tomato	nucleus	25.48	26.47
Solyc01g007070.2.1	Tomato	nucleus	25.48	26.43
Solyc04g080790.2.1	Tomato	nucleus	22.86	25.11
Solyc08g065420.2.1	Tomato	nucleus	14.33	18.6

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.5	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain
InterPro:Homeobox_dom	InterPro:IPR001356	UniProt:K4BCE5	PFAM:PF05920	PFAM:PF07526	InterPro:POX_dom
PFscan:PS50071	PANTHER:PTHR11850	PANTHER:PTHR11850:SF136	SMART:SM00389	SMART:SM00574	SUPFAM:SSF46689
EnsemblPlantsGene:Solyc02g089940.2	EnsemblPlants:Solyc02g089940.2.1	UniParc:UPI0002768E62	SEG:seg	:	:

Description

No Description!

Coordinates

chr2:+:51625328..51631214

Molecular Weight (calculated)

79201.7 Da

IEP (calculated)

7.220

GRAVY (calculated)

-0.588

Length

726 amino acids

Sequence
(BLAST)

001: MGIATQPITL RPCHKYPVIQ QVVENLNSMS QDYHHHSLFS FPNGFERSQA EQQQHQHQQA QQIRRDKLRV QGFEPFEDET SGLPTVYETA GMLSEMFNFP
101: PGNAATNAAE LLETQFNPNF RQPNPRIHAA AAMGNEWFGN HRQGMVVGGG ASSQPLGYAK NHTDSMQLFL MNPQPRSPSP SPPNSTSSTL HMLLPNPSST
201: PTLQGFPNPA EGSFGQFMTW GNGGASAATA THHLNAQNEI GGVNVVESQG LSLSLSSSLQ HKAEELQMSG EAGGMLFFNQ GGSSTSGQYR YKNMNMGGSG
301: ISPNIHQVHV GYGSSLGVVN VLRNSKYAKA AQELLEEFCS VGRGKLKKNN NKAAANNPSG GANNEASSKD VPTLSAADRI EHQRRKVKLL SMLDEVDRRY
401: NHYCEQMQMV VNSFDLVMGF GAAVPYTALA QKAMSRHFRC LKDAIGAQLK QSCELLGEKD AGTSGLTKGE TPRLKMLEQS LRQQRAFHQM GMMEQEAWRP
501: QRGLPERSVN ILRAWLFEHF LHPYPSDADK HLLARQTGLS RNQVSNWFIN ARVRLWKPMV EDMYQQEAKD EDENSQSQNS GNNIIAQTPT PNSLTNSSST
601: NITTATAAAT TTTAPTTTTA LAAAETGTAA TPITVTSSKR SQINATDSDP SLVAINSFSE NQATFTTNIH DPDACRRGNF SGDDGTTTHD HMGSTMIRFG
701: TTAGDVSLTL GLRHAGNLPE NTHFFG

Best Arabidopsis Sequence Match ( AT4G36870.1 )
(BLAST)

001: MGITKTSPNT TILLKTFHNN SMSQDYHHHH HHNQHQGGIF NFSNGFDRSD SPNLTTQQKQ EHQRVEMDEE SSVAGGRIPV YESAGMLSEM FNFPGSSGGG
101: RDLDLGQSFR SNRQLLEEQH QNIPAMNATD SATATAAAMQ LFLMNPPPPQ QPPSPSSTTS PRSHHNSSTL HMLLPSPSTN TTHHQNYTNH MSMHQLPHQH
201: HQQISTWQSS PDHHHHHHNS QTEIGTVHVE NSGGHGGQGL SLSLSSSLEA AAKAEEYRNI YYGANSSNAS PHHQYNQFKT LLANSSQHHH QVLNQFRSSP
301: AASSSSMAAV NILRNSRYTT AAQELLEEFC SVGRGFLKKN KLGNSSNPNT CGGDGGGSSP SSAGANKEHP PLSASDRIEH QRRKVKLLTM LEEVDRRYNH
401: YCEQMQMVVN SFDIVMGHGA ALPYTALAQK AMSRHFRCLK DAVAAQLKQS CELLGDKDAA GISSSGLTKG ETPRLRLLEQ SLRQNRAFHQ MGMMEQEAWR
501: PQRGLPERSV NILRAWLFEH FLHPYPSDAD KHLLARQTGL SRNQVSNWFI NARVRLWKPM VEEMYQQESK EREREEELEE NEEDQETKNS NDDKSTKSNN
601: NESNFTAVRT TSQTPTTTAP DASDADAAVA TGHRLRSNIN AYENDASSLL LPSSYSNAAA PAAVSDDLNS RYGGSDAFSA VATCQQSVGG FDDADMDGVN
701: VIRFGTNPTG DVSLTLGLRH AGNMPDKDAS FCVREFGGF

Arabidopsis Description

BLH2BEL1-like homeodomain protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW80]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.