Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G063100.1 | Wheat | nucleus, plastid | 90.29 | 97.84 |
| TraesCS4A01G252100.2 | Wheat | nucleus | 93.65 | 97.54 |
| HORVU4Hr1G010430.6 | Barley | nucleus | 92.53 | 91.84 |
| EER93512 | Sorghum | nucleus, plastid | 81.07 | 84.55 |
| Zm00001d033898_P002 | Maize | nucleus | 78.83 | 83.84 |
| Os03t0732100-01 | Rice | nucleus | 78.58 | 79.87 |
| GSMUA_Achr5P08840_001 | Banana | nucleus | 24.03 | 60.88 |
| Bra032147.1-P | Field mustard | nucleus | 23.16 | 58.12 |
| Bra011713.1-P | Field mustard | nucleus | 24.41 | 57.48 |
| Bra010577.1-P | Field mustard | nucleus | 23.41 | 57.14 |
| VIT_18s0001g11800.t01 | Wine grape | nucleus | 23.41 | 53.87 |
| PGSC0003DMT400056612 | Potato | nucleus | 19.55 | 53.22 |
| KRH76894 | Soybean | nucleus | 42.96 | 48.59 |
| KRH28575 | Soybean | nucleus | 42.22 | 48.09 |
| KRH69971 | Soybean | nucleus | 39.98 | 47.63 |
| Solyc02g089940.2.1 | Tomato | nucleus | 41.97 | 46.42 |
| PGSC0003DMT400026172 | Potato | nucleus | 42.59 | 46.34 |
| CDX76849 | Canola | nucleus | 34.37 | 45.92 |
| CDY46061 | Canola | nucleus | 34.62 | 45.72 |
| Bra039212.1-P | Field mustard | nucleus | 34.5 | 45.56 |
| KRH08329 | Soybean | nucleus | 43.96 | 45.43 |
| CDX69252 | Canola | nucleus | 37.48 | 45.13 |
| Solyc02g065490.2.1 | Tomato | nucleus | 34.99 | 45.03 |
| CDX75604 | Canola | nucleus | 37.36 | 44.84 |
| CDY39669 | Canola | nucleus | 35.74 | 44.5 |
| VIT_04s0023g01020.t01 | Wine grape | nucleus | 46.7 | 44.33 |
| CDY62523 | Canola | nucleus | 35.74 | 44.29 |
| CDY22463 | Canola | nucleus | 36.61 | 43.88 |
| CDY24765 | Canola | nucleus | 35.87 | 43.18 |
| AT2G23760.4 | Thale cress | nucleus | 35.12 | 41.53 |
| AT4G36870.2 | Thale cress | nucleus | 37.98 | 41.27 |
| Solyc04g079830.2.1 | Tomato | nucleus | 33.87 | 39.31 |
| TraesCS7D01G019800.1 | Wheat | nucleus | 21.54 | 35.82 |
| TraesCS1D01G193800.1 | Wheat | nucleus | 22.91 | 31.24 |
| TraesCS4D01G022600.1 | Wheat | nucleus | 24.53 | 30.88 |
| TraesCS1D01G280300.1 | Wheat | nucleus | 21.92 | 30.72 |
| TraesCS4D01G279300.1 | Wheat | nucleus | 21.54 | 29.47 |
| TraesCS5D01G013300.1 | Wheat | nucleus | 23.66 | 29.23 |
| TraesCS4D01G340700.1 | Wheat | nucleus | 22.04 | 28.87 |
| TraesCS4D01G022500.1 | Wheat | nucleus | 13.2 | 28.42 |
| TraesCS4D01G111900.1 | Wheat | nucleus | 23.04 | 27.86 |
| TraesCS3D01G357400.1 | Wheat | nucleus | 20.92 | 26.97 |
| TraesCS7D01G364500.1 | Wheat | nucleus | 14.2 | 20.73 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF05920 | PFAM:PF07526 |
| InterPro:POX_dom | PFscan:PS50071 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF136 | InterPro:Peptidase_S1_PA | SMART:SM00389 |
| SMART:SM00574 | SUPFAM:SSF46689 | SUPFAM:SSF50494 | EnsemblPlantsGene:TraesCS4D01G062100 | EnsemblPlants:TraesCS4D01G062100.1 | TIGR:cd00086 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr4D:+:37923943..37933388
Molecular Weight (calculated)
84416.3 Da
IEP (calculated)
6.508
GRAVY (calculated)
-0.537
Length
803 amino acids
Sequence
(BLAST)
(BLAST)
001: MPCAVVADEL VSGCCGRSKG IFLGADDDDD DSGAAGMGIA APPCQQTTTR QVSATTSSAA IYGGRPATAS SMSHSQGFHQ GSSGVYGFSS DGFDRPGSSQ
101: DHDQQQEQQQ HHVAQQSRRD KMRVQGFDPA AAAAHGLLPI DGDEHVEPGA MYDHAAAAGA SNMLAEMFNF SAQTPSGPSA TELLASQMNA NYRFGFRQQA
201: PGAVVAGLPG DGGWFGSGGP GRAGVVLGGA NLLGETSSPK QQAGGMAGLA TDPAAAMQLF LMNPQQQQQS RSSPPSPPPS DAQSAIQHHE AFQAYGNAAS
301: SFGGGGAGVV EGQGLSLSLS PSLQQLEMAK QAEELRVRDG VLYFNRQQQQ QQQAPSVQQL PMALHGQVGT MGQQLHVGYG PAGVAGVLRN SKYTRAAQEL
401: LDEFCSVGRG QTIKGGGRGA GGSSSNPNAS KGGPSSSGAA QSPSSASKEP PQLSPADRFE QQRKKAKLIS MLDEVDRRYN HYCDQMQMVV NFFDSVMGFG
501: AATPYTALAQ KAMSRHFRCL KDAIAAQLRH TCELLGEKDA GTSSGLTKGE TPRLRAIDQS LRQQRAFHHM GMMEQEAWRP QRGLPERSVS ILRSWLFEHF
601: LHPYPSDADK HLLARQTGLS RNQVSNWFIN ARVRLWKPMI EEMYQQETKE LEGSSAGGGG GGPESGNDPS GADDLHSPTT TGAQQHPQQQ VVMQHGGGRY
701: GQQEHGMSGV HPHKLDPGAG PSVADAAFVG LDPAELLGGD AHVGAADDLY GRFEPGVRMR YGPAATGAVS GDVSLTLGLQ HAGAGNQGPD GSGRFSLRDY
801: NGC
101: DHDQQQEQQQ HHVAQQSRRD KMRVQGFDPA AAAAHGLLPI DGDEHVEPGA MYDHAAAAGA SNMLAEMFNF SAQTPSGPSA TELLASQMNA NYRFGFRQQA
201: PGAVVAGLPG DGGWFGSGGP GRAGVVLGGA NLLGETSSPK QQAGGMAGLA TDPAAAMQLF LMNPQQQQQS RSSPPSPPPS DAQSAIQHHE AFQAYGNAAS
301: SFGGGGAGVV EGQGLSLSLS PSLQQLEMAK QAEELRVRDG VLYFNRQQQQ QQQAPSVQQL PMALHGQVGT MGQQLHVGYG PAGVAGVLRN SKYTRAAQEL
401: LDEFCSVGRG QTIKGGGRGA GGSSSNPNAS KGGPSSSGAA QSPSSASKEP PQLSPADRFE QQRKKAKLIS MLDEVDRRYN HYCDQMQMVV NFFDSVMGFG
501: AATPYTALAQ KAMSRHFRCL KDAIAAQLRH TCELLGEKDA GTSSGLTKGE TPRLRAIDQS LRQQRAFHHM GMMEQEAWRP QRGLPERSVS ILRSWLFEHF
601: LHPYPSDADK HLLARQTGLS RNQVSNWFIN ARVRLWKPMI EEMYQQETKE LEGSSAGGGG GGPESGNDPS GADDLHSPTT TGAQQHPQQQ VVMQHGGGRY
701: GQQEHGMSGV HPHKLDPGAG PSVADAAFVG LDPAELLGGD AHVGAADDLY GRFEPGVRMR YGPAATGAVS GDVSLTLGLQ HAGAGNQGPD GSGRFSLRDY
801: NGC
001: MGITKTSPNT TILLKTFHNN SMSQDYHHHH HHNQHQGGIF NFSNGFDRSD SPNLTTQQKQ EHQRVEMDEE SSVAGGRIPV YESAGMLSEM FNFPGSSGGG
101: RDLDLGQSFR SNRQLLEEQH QNIPAMNATD SATATAAAMQ LFLMNPPPPQ QPPSPSSTTS PRSHHNSSTL HMLLPSPSTN TTHHQNYTNH MSMHQLPHQH
201: HQQISTWQSS PDHHHHHHNS QTEIGTVHVE NSGGHGGQGL SLSLSSSLEA AAKAEEYRNI YYGANSSNAS PHHQYNQFKT LLANSSQHHH QVLNQFRSSP
301: AASSSSMAAV NILRNSRYTT AAQELLEEFC SVGRGFLKKN KLGNSSNPNT CGGDGGGSSP SSAGANKEHP PLSASDRIEH QRRKVKLLTM LEEVDRRYNH
401: YCEQMQMVVN SFDIVMGHGA ALPYTALAQK AMSRHFRCLK DAVAAQLKQS CELLGDKDAA GISSSGLTKG ETPRLRLLEQ SLRQNRAFHQ MGMMEQEAWR
501: PQRGLPERSV NILRAWLFEH FLHPYPSDAD KHLLARQTGL SRNQVSNWFI NARVRLWKPM VEEMYQQESK EREREEELEE NEEDQETKNS NDDKSTKSNN
601: NESNFTAVRT TSQTPTTTAP DASDADAAVA TGHRLRSNIN AYENDASSLL LPSSYSNAAA PAAVSDDLNS RYGGSDAFSA VATCQQSVGG FDDADMDGVN
701: VIRFGTNPTG DVSLTLGLRH AGNMPDKDAS FCVREFGGF
101: RDLDLGQSFR SNRQLLEEQH QNIPAMNATD SATATAAAMQ LFLMNPPPPQ QPPSPSSTTS PRSHHNSSTL HMLLPSPSTN TTHHQNYTNH MSMHQLPHQH
201: HQQISTWQSS PDHHHHHHNS QTEIGTVHVE NSGGHGGQGL SLSLSSSLEA AAKAEEYRNI YYGANSSNAS PHHQYNQFKT LLANSSQHHH QVLNQFRSSP
301: AASSSSMAAV NILRNSRYTT AAQELLEEFC SVGRGFLKKN KLGNSSNPNT CGGDGGGSSP SSAGANKEHP PLSASDRIEH QRRKVKLLTM LEEVDRRYNH
401: YCEQMQMVVN SFDIVMGHGA ALPYTALAQK AMSRHFRCLK DAVAAQLKQS CELLGDKDAA GISSSGLTKG ETPRLRLLEQ SLRQNRAFHQ MGMMEQEAWR
501: PQRGLPERSV NILRAWLFEH FLHPYPSDAD KHLLARQTGL SRNQVSNWFI NARVRLWKPM VEEMYQQESK EREREEELEE NEEDQETKNS NDDKSTKSNN
601: NESNFTAVRT TSQTPTTTAP DASDADAAVA TGHRLRSNIN AYENDASSLL LPSSYSNAAA PAAVSDDLNS RYGGSDAFSA VATCQQSVGG FDDADMDGVN
701: VIRFGTNPTG DVSLTLGLRH AGNMPDKDAS FCVREFGGF
Arabidopsis Description
BLH2BEL1-like homeodomain protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW80]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.