Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G345600.1 | Wheat | nucleus | 96.74 | 97.05 |
| TraesCS5A01G514700.1 | Wheat | nucleus | 94.45 | 95.7 |
| HORVU4Hr1G084590.2 | Barley | nucleus | 92.82 | 91.48 |
| Os03t0124000-01 | Rice | nucleus | 62.81 | 65.14 |
| Zm00001d027435_P001 | Maize | nucleus | 65.09 | 64.35 |
| KXG40303 | Sorghum | nucleus | 65.25 | 63.9 |
| TraesCS1D01G193800.1 | Wheat | nucleus | 53.02 | 55.18 |
| CDY45383 | Canola | nucleus | 20.88 | 48.67 |
| GSMUA_Achr1P06400_001 | Banana | nucleus | 34.91 | 41.47 |
| GSMUA_Achr2P04310_001 | Banana | nucleus | 37.68 | 41.4 |
| TraesCS7D01G019800.1 | Wheat | nucleus | 30.51 | 38.72 |
| VIT_02s0025g00200.t01 | Wine grape | nucleus | 39.64 | 37.62 |
| KRH77572 | Soybean | nucleus | 38.99 | 37.0 |
| KRH27902 | Soybean | nucleus | 38.66 | 36.92 |
| KRH41225 | Soybean | nucleus | 37.68 | 35.76 |
| PGSC0003DMT400032122 | Potato | nucleus | 36.87 | 35.7 |
| KRH59951 | Soybean | nucleus | 36.87 | 35.59 |
| Solyc08g081400.2.1 | Tomato | nucleus | 37.36 | 35.56 |
| CDY44476 | Canola | nucleus | 32.46 | 35.04 |
| Bra025497.1-P | Field mustard | nucleus | 33.28 | 34.4 |
| AT5G41410.1 | Thale cress | nucleus | 34.09 | 34.21 |
| TraesCS4D01G279300.1 | Wheat | nucleus | 27.08 | 28.28 |
| TraesCS4D01G022500.1 | Wheat | nucleus | 16.48 | 27.08 |
| TraesCS1D01G280300.1 | Wheat | nucleus | 24.47 | 26.18 |
| TraesCS4D01G111900.1 | Wheat | nucleus | 27.24 | 25.15 |
| TraesCS4D01G022600.1 | Wheat | nucleus | 26.1 | 25.08 |
| TraesCS3D01G357400.1 | Wheat | nucleus | 24.14 | 23.76 |
| TraesCS5D01G013300.1 | Wheat | nucleus | 24.63 | 23.23 |
| TraesCS4D01G062100.1 | Wheat | nucleus | 28.87 | 22.04 |
| TraesCS7D01G364500.1 | Wheat | nucleus | 15.66 | 17.45 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF05920 | PFAM:PF07526 |
| InterPro:POX_dom | PFscan:PS50071 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF105 | SMART:SM00389 | SMART:SM00574 |
| SUPFAM:SSF46689 | EnsemblPlantsGene:TraesCS4D01G340700 | EnsemblPlants:TraesCS4D01G340700.1 | TIGR:cd00086 | SEG:seg | : |
Description
No Description!
Coordinates
chr4D:-:497894922..497898536
Molecular Weight (calculated)
65807.1 Da
IEP (calculated)
6.601
GRAVY (calculated)
-0.525
Length
613 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHDPSLGFA DYFSAADAAA ASLMPQMDEG APELYGLQSG MELLGMRGLH AAAMSGATSV SADVHCDGGG DGHDGSTMRF FLEQQQQQHH QHHHPSQAPL
101: SLSLCRPEQV AQLHHHHLGG SSQQQQQQHE ASAASWMLPH EHEAATYAHG HGAAWPLRSS RFLLPAQQLL QGYCSLPVDI TPKRAKQPPQ QQQQQQDEAG
201: GGEVSSSSTS GWTPSAQIQA MEALELKRLK DRLYVMLEEV DRRYRRYCEQ MRGLAGGFEA VAGERAASGY TAVAARTISR HFRSLRDGIV AQLQAVRKAL
301: GEKDVAPPGM TRGDTPRLKV LDQCIRQQKA MHQNGGMMMD SHPWRPQRGL PERAVTILRA WLFEHFLNPY PSDVDKHILA RQTGLSRSQV SNWFINARVR
401: LWKPMVEEMY VEEMKGEQQD DGGLINPNNP SSSGSHASDA QGQQGAAAAD EGERVGADDR KPTRAQLHVG HDAGSLASVV NIAGVPARME SFGVMDAAHH
501: LDFDAYGGQG QGGFGGGAGG VSLTLGLQQH DTHGGVGGVN IAFGAPSSAQ HGAGGFLFPG EQMDGVGLHP SGGHGQNIQF GMDGAAEGSS HGVQDQHYRG
601: MSAGFHLLRD LAG
101: SLSLCRPEQV AQLHHHHLGG SSQQQQQQHE ASAASWMLPH EHEAATYAHG HGAAWPLRSS RFLLPAQQLL QGYCSLPVDI TPKRAKQPPQ QQQQQQDEAG
201: GGEVSSSSTS GWTPSAQIQA MEALELKRLK DRLYVMLEEV DRRYRRYCEQ MRGLAGGFEA VAGERAASGY TAVAARTISR HFRSLRDGIV AQLQAVRKAL
301: GEKDVAPPGM TRGDTPRLKV LDQCIRQQKA MHQNGGMMMD SHPWRPQRGL PERAVTILRA WLFEHFLNPY PSDVDKHILA RQTGLSRSQV SNWFINARVR
401: LWKPMVEEMY VEEMKGEQQD DGGLINPNNP SSSGSHASDA QGQQGAAAAD EGERVGADDR KPTRAQLHVG HDAGSLASVV NIAGVPARME SFGVMDAAHH
501: LDFDAYGGQG QGGFGGGAGG VSLTLGLQQH DTHGGVGGVN IAFGAPSSAQ HGAGGFLFPG EQMDGVGLHP SGGHGQNIQF GMDGAAEGSS HGVQDQHYRG
601: MSAGFHLLRD LAG
001: MGLATTTSSM SQDYHHHQGI FSFSNGFHRS SSTTHQEEVD ESAVVSGAQI PVYETAGMLS EMFAYPGGGG GGSGGEILDQ STKQLLEQQN RHNNNNNSTL
101: HMLLPNHHQG FAFTDENTMQ PQQQQHFTWP SSSSDHHQNR DMIGTVHVEG GKGLSLSLSS SLAAAKAEEY RSIYCAAVDG TSSSSNASAH HHQFNQFKNL
201: LLENSSSQHH HHQVVGHFGS SSSSPMAASS SIGGIYTLRN SKYTKPAQEL LEEFCSVGRG HFKKNKLSRN NSNPNTTGGG GGGGSSSSAG TANDSPPLSP
301: ADRIEHQRRK VKLLSMLEEV DRRYNHYCEQ MQMVVNSFDQ VMGYGAAVPY TTLAQKAMSR HFRCLKDAVA VQLKRSCELL GDKEAAGAAS SGLTKGETPR
401: LRLLEQSLRQ QRAFHHMGMM EQEAWRPQRG LPERSVNILR AWLFEHFLNP YPSDADKHLL ARQTGLSRNQ VSNWFINARV RLWKPMVEEM YQQEAKEREE
501: AEEENENQQQ QRRQQQTNNN DTKPNNNENN FTVITAQTPT TMTSTHHEND SSFLSSVAAA SHGGSDAFTV ATCQQDVSDF HVDGDGVNVI RFGTKQTGDV
601: SLTLGLRHSG NIPDKNTSFS VRDFGDF
101: HMLLPNHHQG FAFTDENTMQ PQQQQHFTWP SSSSDHHQNR DMIGTVHVEG GKGLSLSLSS SLAAAKAEEY RSIYCAAVDG TSSSSNASAH HHQFNQFKNL
201: LLENSSSQHH HHQVVGHFGS SSSSPMAASS SIGGIYTLRN SKYTKPAQEL LEEFCSVGRG HFKKNKLSRN NSNPNTTGGG GGGGSSSSAG TANDSPPLSP
301: ADRIEHQRRK VKLLSMLEEV DRRYNHYCEQ MQMVVNSFDQ VMGYGAAVPY TTLAQKAMSR HFRCLKDAVA VQLKRSCELL GDKEAAGAAS SGLTKGETPR
401: LRLLEQSLRQ QRAFHHMGMM EQEAWRPQRG LPERSVNILR AWLFEHFLNP YPSDADKHLL ARQTGLSRNQ VSNWFINARV RLWKPMVEEM YQQEAKEREE
501: AEEENENQQQ QRRQQQTNNN DTKPNNNENN FTVITAQTPT TMTSTHHEND SSFLSSVAAA SHGGSDAFTV ATCQQDVSDF HVDGDGVNVI RFGTKQTGDV
601: SLTLGLRHSG NIPDKNTSFS VRDFGDF
Arabidopsis Description
BLH4BEL1-like homeodomain 4 [Source:TAIR;Acc:AT2G23760]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.