Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G340700.1 | Wheat | nucleus | 91.48 | 92.82 |
| TraesCS5A01G514700.1 | Wheat | nucleus | 89.87 | 92.4 |
| TraesCS4B01G345600.1 | Wheat | nucleus | 90.68 | 92.31 |
| Os03t0124000-01 | Rice | nucleus | 62.7 | 65.99 |
| KXG40303 | Sorghum | nucleus | 64.95 | 64.54 |
| Zm00001d027435_P001 | Maize | nucleus | 64.31 | 64.52 |
| HORVU1Hr1G049760.1 | Barley | nucleus | 52.89 | 55.2 |
| CDY45383 | Canola | nucleus | 20.42 | 48.29 |
| GSMUA_Achr1P06400_001 | Banana | nucleus | 33.92 | 40.89 |
| GSMUA_Achr2P04310_001 | Banana | nucleus | 36.5 | 40.68 |
| HORVU3Hr1G072010.1 | Barley | mitochondrion | 7.72 | 37.5 |
| VIT_02s0025g00200.t01 | Wine grape | nucleus | 37.78 | 36.38 |
| KRH27902 | Soybean | nucleus | 37.46 | 36.29 |
| KRH77572 | Soybean | nucleus | 37.62 | 36.22 |
| KRH41225 | Soybean | nucleus | 36.33 | 34.98 |
| PGSC0003DMT400032122 | Potato | nucleus | 35.53 | 34.91 |
| CDY44476 | Canola | nucleus | 31.67 | 34.68 |
| Solyc08g081400.2.1 | Tomato | nucleus | 35.69 | 34.47 |
| KRH59951 | Soybean | nucleus | 34.89 | 34.17 |
| Bra025497.1-P | Field mustard | nucleus | 32.32 | 33.9 |
| AT5G41410.1 | Thale cress | nucleus | 33.28 | 33.88 |
| HORVU4Hr1G074250.1 | Barley | nucleus | 26.21 | 27.67 |
| HORVU4Hr1G003750.1 | Barley | nucleus | 15.11 | 27.49 |
| HORVU4Hr1G003800.7 | Barley | nucleus | 25.4 | 24.53 |
| HORVU5Hr1G001090.1 | Barley | nucleus | 24.6 | 23.57 |
| HORVU4Hr1G010430.6 | Barley | nucleus | 28.78 | 22.13 |
| HORVU4Hr1G020710.1 | Barley | nucleus | 18.49 | 22.12 |
| HORVU1Hr1G072850.1 | Barley | nucleus, plastid | 24.28 | 19.02 |
| HORVU3Hr1G085720.1 | Barley | nucleus, plastid | 21.86 | 18.06 |
| HORVU7Hr1G088090.4 | Barley | nucleus | 12.7 | 14.26 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.5 | EMBL:AK367800 | EMBL:AK372185 | UniProt:F2DV82 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:HORVU4Hr1G084590 | EnsemblPlants:HORVU4Hr1G084590.2 | InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom |
| InterPro:IPR001356 | PFAM:PF05920 | PFAM:PF07526 | InterPro:POX_dom | PFscan:PS50071 | PANTHER:PTHR11850 |
| PANTHER:PTHR11850:SF105 | SMART:SM00389 | SMART:SM00574 | SUPFAM:SSF46689 | UniParc:UPI0002007174 | SEG:seg |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DV82]
Coordinates
chrchr4H:+:629355482..629360885
Molecular Weight (calculated)
66866.1 Da
IEP (calculated)
6.507
GRAVY (calculated)
-0.594
Length
622 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHDPSLGFA DYFSAADAAA ASLMPQMDEG APELYGLQAG MELLGMRGLH AAAMPGATSA AEDVHCDGGG DGHDGSTMRF FLEQQQQQQQ QHHQHHHPSQ
101: APLSLSLCRP EEVAQLHQQH HQHHHLGGSS QQQEQQQHEV AVATWMLPHD HDAATYAQAQ GHGAPWPLRS SRFLAPAQQL LQGYCSLPVD TTPKRGKPQQ
201: QDEAGGGGEV SSSSTSDWTP SPQIQAMDAL ELKRLRDRLY VMLEEVDRRY RRYCEQMRGL AGGFEAAAGE RAASGYTAVA ARTISRHFRS LRDGIVAQLQ
301: AVRKALGEKD VSPPGMTRGD TPRLKVLDQC IRQQKAMHQN GGMMMDSHPW RPQRGLPERA VTILRAWLFE HFLNPYPSDV DKHILARQTG LSRSQVSNWF
401: INARVRLWKP MVEEMYVEEM KGEQQDDGGL NPNNPSSSGS HASDAQGQQG AAAADEGERV VADERKPTRA QLHVGHDAGS LASVVNIAGV PARMESYGVM
501: DAGHHLDFDA YGGGQGQGFG GGAGGVSLTL GLQQHDTHGH GGGGGVNIAF GAPSSAQHGA GGFLFPGEQM DVMGLHPSGG HGQNIQFGMG GQGAAEGSSH
601: GVQDQHYRGM SAGFHLLRDL AG
101: APLSLSLCRP EEVAQLHQQH HQHHHLGGSS QQQEQQQHEV AVATWMLPHD HDAATYAQAQ GHGAPWPLRS SRFLAPAQQL LQGYCSLPVD TTPKRGKPQQ
201: QDEAGGGGEV SSSSTSDWTP SPQIQAMDAL ELKRLRDRLY VMLEEVDRRY RRYCEQMRGL AGGFEAAAGE RAASGYTAVA ARTISRHFRS LRDGIVAQLQ
301: AVRKALGEKD VSPPGMTRGD TPRLKVLDQC IRQQKAMHQN GGMMMDSHPW RPQRGLPERA VTILRAWLFE HFLNPYPSDV DKHILARQTG LSRSQVSNWF
401: INARVRLWKP MVEEMYVEEM KGEQQDDGGL NPNNPSSSGS HASDAQGQQG AAAADEGERV VADERKPTRA QLHVGHDAGS LASVVNIAGV PARMESYGVM
501: DAGHHLDFDA YGGGQGQGFG GGAGGVSLTL GLQQHDTHGH GGGGGVNIAF GAPSSAQHGA GGFLFPGEQM DVMGLHPSGG HGQNIQFGMG GQGAAEGSSH
601: GVQDQHYRGM SAGFHLLRDL AG
001: MARDQFYGHN NHHHQEQQHQ MINQIQGFDE TNQNPTDHHH YNHQIFGSNS NMGMMIDFSK QQQIRMTSGS DHHHHHHQTS GGTDQNQLLE DSSSAMRLCN
101: VNNDFPSEVN DERPPQRPSQ GLSLSLSSSN PTSISLQSFE LRPQQQQQQG YSGNKSTQHQ NLQHTQMMMM MMNSHHQNNN NNNHQHHNHH QFQIGSSKYL
201: SPAQELLSEF CSLGVKESDE EVMMMKHKKK QKGKQQEEWD TSHHSNNDQH DQSATTSSKK HVPPLHSLEF MELQKRKAKL LSMLEELKRR YGHYREQMRV
301: AAAAFEAAVG LGGAEIYTAL ASRAMSRHFR CLKDGLVGQI QATSQALGER EEDNRAVSIA ARGETPRLRL LDQALRQQKS YRQMTLVDAH PWRPQRGLPE
401: RAVTTLRAWL FEHFLHPYPS DVDKHILARQ TGLSRSQVSN WFINARVRLW KPMIEEMYCE ETRSEQMEIT NPMMIDTKPD PDQLIRVEPE SLSSIVTNPT
501: SKSGHNSTHG TMSLGSTFDF SLYGNQAVTY AGEGGPRGDV SLTLGLQRND GNGGVSLALS PVTAQGGQLF YGRDHIEEGP VQYSASMLDD DQVQNLPYRN
601: LMGAQLLHDI V
101: VNNDFPSEVN DERPPQRPSQ GLSLSLSSSN PTSISLQSFE LRPQQQQQQG YSGNKSTQHQ NLQHTQMMMM MMNSHHQNNN NNNHQHHNHH QFQIGSSKYL
201: SPAQELLSEF CSLGVKESDE EVMMMKHKKK QKGKQQEEWD TSHHSNNDQH DQSATTSSKK HVPPLHSLEF MELQKRKAKL LSMLEELKRR YGHYREQMRV
301: AAAAFEAAVG LGGAEIYTAL ASRAMSRHFR CLKDGLVGQI QATSQALGER EEDNRAVSIA ARGETPRLRL LDQALRQQKS YRQMTLVDAH PWRPQRGLPE
401: RAVTTLRAWL FEHFLHPYPS DVDKHILARQ TGLSRSQVSN WFINARVRLW KPMIEEMYCE ETRSEQMEIT NPMMIDTKPD PDQLIRVEPE SLSSIVTNPT
501: SKSGHNSTHG TMSLGSTFDF SLYGNQAVTY AGEGGPRGDV SLTLGLQRND GNGGVSLALS PVTAQGGQLF YGRDHIEEGP VQYSASMLDD DQVQNLPYRN
601: LMGAQLLHDI V
Arabidopsis Description
BEL1Homeobox protein BEL1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q38897]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.