Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G324100.1 | Wheat | nucleus | 84.78 | 84.19 |
| TraesCS3A01G289400.1 | Wheat | nucleus | 83.74 | 81.76 |
| TraesCS3D01G289200.1 | Wheat | nucleus | 83.74 | 81.76 |
| EES01480 | Sorghum | nucleus | 60.9 | 49.72 |
| Zm00001d043470_P001 | Maize | mitochondrion, nucleus | 57.09 | 48.82 |
| GSMUA_Achr9P05640_001 | Banana | nucleus | 41.52 | 41.52 |
| GSMUA_Achr6P31770_001 | Banana | nucleus | 41.87 | 41.3 |
| HORVU1Hr1G076490.1 | Barley | nucleus | 49.13 | 40.0 |
| VIT_10s0003g01750.t01 | Wine grape | nucleus | 18.69 | 27.69 |
| HORVU4Hr1G049960.1 | Barley | mitochondrion | 23.18 | 23.93 |
| CDX99420 | Canola | mitochondrion | 24.57 | 21.71 |
| CDY09258 | Canola | mitochondrion | 23.88 | 21.56 |
| Bra020989.1-P | Field mustard | mitochondrion | 23.53 | 21.18 |
| CDX78899 | Canola | mitochondrion | 23.88 | 21.17 |
| Bra013354.1-P | Field mustard | mitochondrion | 23.88 | 21.17 |
| CDY01560 | Canola | nucleus | 24.57 | 19.94 |
| HORVU2Hr1G093380.1 | Barley | mitochondrion | 17.3 | 19.61 |
| AT4G18830.1 | Thale cress | mitochondrion, nucleus, plastid | 23.53 | 19.48 |
| KRH11062 | Soybean | plastid | 24.22 | 18.92 |
| Bra012575.1-P | Field mustard | nucleus | 23.88 | 18.65 |
| KRH42918 | Soybean | plastid | 26.64 | 18.64 |
| KRH59028 | Soybean | plastid | 26.3 | 18.58 |
| HORVU3Hr1G081260.2 | Barley | mitochondrion | 24.91 | 18.37 |
| HORVU4Hr1G083150.1 | Barley | plastid | 14.88 | 17.0 |
| HORVU3Hr1G083700.1 | Barley | plastid | 13.15 | 16.96 |
| KRH21207 | Soybean | plastid | 23.53 | 16.43 |
| HORVU1Hr1G049440.1 | Barley | mitochondrion | 13.84 | 16.06 |
| HORVU1Hr1G069900.1 | Barley | endoplasmic reticulum, mitochondrion, nucleus, plastid | 23.18 | 15.91 |
| HORVU1Hr1G074020.1 | Barley | nucleus, plastid | 12.46 | 15.86 |
| Solyc02g072030.1.1 | Tomato | mitochondrion, nucleus, plastid | 20.07 | 15.38 |
| PGSC0003DMT400073252 | Potato | nucleus | 20.42 | 14.39 |
| HORVU6Hr1G065900.1 | Barley | mitochondrion, plastid | 14.53 | 14.14 |
| CDY62560 | Canola | nucleus | 22.15 | 13.56 |
| HORVU4Hr1G070860.1 | Barley | cytosol, mitochondrion | 15.22 | 13.1 |
| HORVU3Hr1G055980.1 | Barley | nucleus | 15.22 | 13.1 |
| HORVU3Hr1G030870.1 | Barley | nucleus | 14.19 | 11.45 |
| HORVU2Hr1G094240.1 | Barley | cytosol, mitochondrion, plastid | 13.84 | 11.14 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G071640.1 | EnsemblPlantsGene:HORVU3Hr1G071640 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045892 | InterPro:IPR006458 | InterPro:Ovate | InterPro:Ovate_C | PANTHER:PTHR33057 |
| PANTHER:PTHR33057:SF20 | PFAM:PF04844 | PFscan:PS51754 | SEG:seg | TIGRFAMs:TIGR01568 | UniParc:UPI000295BE1F |
| UniProt:M0UDN9 | MapMan:15.5.37 | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:541908034..541909152
Molecular Weight (calculated)
31501.3 Da
IEP (calculated)
11.236
GRAVY (calculated)
-0.632
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MGWWGLKTTK QQDHAHQESK SGKGKAAFSP LTWFSKLTAK HNAAASSKLK HGAPEPKSSG GGGFHERATP GPAPQSNPAD AFSPTAAAAD IVPRRLSVGN
101: DDAEAEATAA RQLYRRRHYS VGGDRDLPPL RHLIAFSRAA SPPQPAPTPV LTAMPPLPSD ADEEKLPPRR QRRRRGTGRR SFSGRTAPGA RLAAVRVRSP
201: RCAVAAVSGL ERFAVVRRTS DPQREFRDSM VEMIASKRIG RPEELETLLA CYLSLNADEH HDCIVKVFRQ VWFELNPARV ATVTGQARS
101: DDAEAEATAA RQLYRRRHYS VGGDRDLPPL RHLIAFSRAA SPPQPAPTPV LTAMPPLPSD ADEEKLPPRR QRRRRGTGRR SFSGRTAPGA RLAAVRVRSP
201: RCAVAAVSGL ERFAVVRRTS DPQREFRDSM VEMIASKRIG RPEELETLLA CYLSLNADEH HDCIVKVFRQ VWFELNPARV ATVTGQARS
001: MGNYKFRISE MLPNAWFHKL KDVTKHSKPK NKASSSSSNT CSKKKPSSDS LPQHSYFSNS LVANNPPHHN SPRNSLHTKK MSKRKTLYKP SLKPLTPPPL
101: LVSASFNKSK INDQDSSYSL FPAIETSPES FVYSFYEEDD DDEFVEFSNF KINTKNKAFT KQKVKVIDSV EKACTASKPI KKPQKSHLSV KISRDEDDNE
201: YKAEKKYQRQ VSSGRKPSAG INLKRVNSPR IQLSGTRRST SRRSESKQDV LESFAVMKRS VDPKKDFRES MIEMIEENNI RASKDLEDLL ACYLTLNPKE
301: YHDLIIHVFE QIWLQLTKTK
101: LVSASFNKSK INDQDSSYSL FPAIETSPES FVYSFYEEDD DDEFVEFSNF KINTKNKAFT KQKVKVIDSV EKACTASKPI KKPQKSHLSV KISRDEDDNE
201: YKAEKKYQRQ VSSGRKPSAG INLKRVNSPR IQLSGTRRST SRRSESKQDV LESFAVMKRS VDPKKDFRES MIEMIEENNI RASKDLEDLL ACYLTLNPKE
301: YHDLIIHVFE QIWLQLTKTK
Arabidopsis Description
OFP2Transcription repressor OFP2 [Source:UniProtKB/Swiss-Prot;Acc:O04351]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.