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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, nucleus

Predictor Summary:
  • plastid 3
  • mitochondrion 4
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX78899 Canola mitochondrion 79.37 84.97
Bra013354.1-P Field mustard mitochondrion 79.37 84.97
CDX99420 Canola mitochondrion 78.51 83.79
CDY09258 Canola mitochondrion 73.07 79.69
Bra020989.1-P Field mustard mitochondrion 72.21 78.5
CDY01560 Canola nucleus 75.36 73.88
Bra012575.1-P Field mustard nucleus 73.64 69.46
CDY62560 Canola nucleus 69.05 51.06
VIT_10s0003g01750.t01 Wine grape nucleus 17.48 31.28
HORVU3Hr1G071640.1 Barley nucleus 19.48 23.53
TraesCS3B01G324100.1 Wheat nucleus 19.48 23.37
TraesCS3D01G289200.1 Wheat nucleus 19.77 23.31
TraesCS3A01G289400.1 Wheat nucleus 19.77 23.31
GSMUA_Achr9P05640_001 Banana nucleus 19.2 23.18
AT3G52525.1 Thale cress plastid 10.32 22.64
AT5G01840.1 Thale cress nucleus 17.19 22.22
Solyc02g072030.1.1 Tomato mitochondrion, nucleus, plastid 23.78 22.02
AT5G19650.1 Thale cress mitochondrion, nucleus 13.75 21.72
AT2G36026.1 Thale cress nucleus, plastid 11.17 21.31
GSMUA_Achr6P31770_001 Banana nucleus 17.77 21.16
PGSC0003DMT400073252 Potato nucleus 24.64 20.98
AT2G30400.1 Thale cress nucleus 18.34 20.0
KRH11062 Soybean plastid 21.2 20.0
Zm00001d038714_P001 Maize nucleus 17.77 19.68
HORVU1Hr1G076490.1 Barley nucleus 19.77 19.44
AT1G06920.1 Thale cress mitochondrion, nucleus, plastid 17.48 19.37
AT5G58360.1 Thale cress nucleus 16.33 19.26
TraesCS1B01G350500.1 Wheat cytosol, mitochondrion, nucleus 18.91 19.13
TraesCS1D01G340300.1 Wheat nucleus 18.91 19.13
KRH42918 Soybean plastid 22.64 19.13
TraesCS1A01G338100.1 Wheat cytosol 18.34 18.66
Zm00001d043470_P001 Maize mitochondrion, nucleus 18.05 18.64
KRH21207 Soybean plastid 22.06 18.6
EES01480 Sorghum nucleus 18.62 18.36
Os05t0517100-00 Rice mitochondrion 16.62 18.35
KRH59028 Soybean plastid 21.49 18.34
EES19813 Sorghum nucleus 17.19 17.91
AT2G18500.1 Thale cress mitochondrion, plastid 16.05 17.78
Protein Annotations
MapMan:15.5.37EntrezGene:827617ProteinID:AEE84096.1ArrayExpress:AT4G18830EnsemblPlantsGene:AT4G18830RefSeq:AT4G18830
TAIR:AT4G18830RefSeq:AT4G18830-TAIR-GEnsemblPlants:AT4G18830.1TAIR:AT4G18830.1Symbol:ATOFP5EMBL:AY063996
EMBL:AY096608ProteinID:CAB52868.1ProteinID:CAB78885.1ncoils:CoilGO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0005730GO:GO:0005737GO:GO:0005856GO:GO:0006139
GO:GO:0006351GO:GO:0006355GO:GO:0007275GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009553GO:GO:0009987GO:GO:0030863GO:GO:0045892InterPro:IPR006458RefSeq:NP_193618.2
InterPro:OvateInterPro:Ovate_CPFAM:PF04844PO:PO:0000293PO:PO:0025074PFscan:PS51754
PANTHER:PTHR33057PANTHER:PTHR33057:SF10UniProt:Q8VZN1TIGRFAMs:TIGR01568UniParc:UPI00000A5181SEG:seg
Description
OFP5Transcription repressor OFP5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZN1]
Coordinates
chr4:+:10336566..10338674
Molecular Weight (calculated)
40373.1 Da
IEP (calculated)
10.292
GRAVY (calculated)
-0.993
Length
349 amino acids
Sequence
(BLAST)
001: MMRWGRKKPV SSSSSSGLSR ALPVSWFSKL SGSSDLKPAK EKKQDEKASQ NISVKTSLSS TTRRSDIHEN SKRFQRVSVE KENSATRSAD KESNEKFEEI
101: MSSVRKKVRD FQKETCGFLE VEAMDRDNGT VILTPRIQVN RDKQRCERRD QRLLEQKPKR SEQDAGVKVK KPARRTGTGG YSREDSVILG HTITKPAHQW
201: EKLKEVKLRE VKLKADQQRK SLYLKRELNR IGTKENNKVR VFSPRASEKC RVKAIEDLKK AKQRAREHEL LIETADGGME NESFAVVKCS SDPQKDFRDS
301: MIEMIMENGI NHPEELKELL VCYLRLNTDE YHDMIISVFQ QVHNDFNFH
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.