Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04827 | Canola | nucleus | 67.41 | 70.82 |
| Bra040948.1-P | Field mustard | nucleus | 68.89 | 70.72 |
| AT2G30400.1 | Thale cress | nucleus | 33.7 | 28.44 |
| AT1G06920.1 | Thale cress | mitochondrion, nucleus, plastid | 31.85 | 27.3 |
| AT3G52525.1 | Thale cress | plastid | 15.19 | 25.79 |
| VIT_06s0004g07910.t01 | Wine grape | nucleus | 41.11 | 24.94 |
| AT5G58360.1 | Thale cress | nucleus | 27.04 | 24.66 |
| AT5G19650.1 | Thale cress | mitochondrion, nucleus | 18.15 | 22.17 |
| AT2G36026.1 | Thale cress | nucleus, plastid | 14.07 | 20.77 |
| AT2G18500.1 | Thale cress | mitochondrion, plastid | 21.11 | 18.1 |
| AT4G18830.1 | Thale cress | mitochondrion, nucleus, plastid | 22.22 | 17.19 |
Protein Annotations
| MapMan:15.5.37 | EntrezGene:831813 | ProteinID:AED90399.1 | ArrayExpress:AT5G01840 | EnsemblPlantsGene:AT5G01840 | RefSeq:AT5G01840 |
| TAIR:AT5G01840 | RefSeq:AT5G01840-TAIR-G | EnsemblPlants:AT5G01840.1 | TAIR:AT5G01840.1 | Symbol:ATOFP1 | ProteinID:CAB82754.1 |
| InterPro:DNA_bnd_dom_ovate | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005730 | GO:GO:0005856 |
| GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006281 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 |
| GO:GO:0006974 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009653 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016049 | GO:GO:0040007 | GO:GO:0045892 | GO:GO:0051510 | InterPro:IPR006458 |
| RefSeq:NP_195804.1 | InterPro:Ovate | InterPro:Ovate_C | PFAM:PF04844 | PFAM:PF13724 | PO:PO:0000037 |
| PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0009053 | PO:PO:0020100 |
| PO:PO:0025022 | PFscan:PS51754 | PANTHER:PTHR33057 | PANTHER:PTHR33057:SF22 | UniProt:Q9LZW2 | TIGRFAMs:TIGR01568 |
| UniParc:UPI000009EF21 | SEG:seg | : | : | : | : |
Description
OFP1Transcription repressor OFP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZW2]
Coordinates
chr5:+:324428..325678
Molecular Weight (calculated)
30031.7 Da
IEP (calculated)
11.044
GRAVY (calculated)
-0.805
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNNYRFKLS ELIPNAWFYK LRDMSKSKKK NLQSQPNSTT SKKKHHAVPT PTSTTPLSPR PPRRPSHSSK APPSHPPRKS SGNRLRHRAT VDSKSSTTSG
101: DSTTTETGSF SPDFRSDQVL LPDESLTGSW HSPCSSKLSK TATFTPPPEL ELRPIITKTA ATARKTAVNS PAGVRLRMRS PRISVSSSAR RSGSSARRSR
201: AVVKASVDPK RDFKESMEEM IAENKIRATK DLEELLACYL CLNSDEYHAI IINVFKQIWL DLNLPPPHSK
101: DSTTTETGSF SPDFRSDQVL LPDESLTGSW HSPCSSKLSK TATFTPPPEL ELRPIITKTA ATARKTAVNS PAGVRLRMRS PRISVSSSAR RSGSSARRSR
201: AVVKASVDPK RDFKESMEEM IAENKIRATK DLEELLACYL CLNSDEYHAI IINVFKQIWL DLNLPPPHSK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.