Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY32706 | Canola | cytosol | 13.85 | 82.0 |
| CDY02814 | Canola | cytosol | 13.18 | 78.0 |
| CDY43860 | Canola | nucleus | 66.89 | 68.28 |
| CDY32990 | Canola | nucleus | 65.88 | 68.18 |
| Bra002657.1-P | Field mustard | nucleus | 68.92 | 59.65 |
| KRH17171 | Soybean | nucleus, plastid | 40.2 | 31.82 |
| KRH72818 | Soybean | nucleus | 40.54 | 31.33 |
| KRG98156 | Soybean | nucleus | 39.53 | 30.39 |
| KRH30114 | Soybean | nucleus | 37.5 | 30.33 |
| PGSC0003DMT400078126 | Potato | nucleus | 34.46 | 29.06 |
| Solyc06g082460.1.1 | Tomato | nucleus | 34.12 | 28.77 |
| AT2G30400.1 | Thale cress | nucleus | 30.41 | 28.12 |
| AT1G06920.1 | Thale cress | mitochondrion, nucleus, plastid | 29.73 | 27.94 |
| AT5G01840.1 | Thale cress | nucleus | 24.66 | 27.04 |
| GSMUA_Achr3P09850_001 | Banana | mitochondrion | 27.36 | 25.55 |
| AT3G52525.1 | Thale cress | plastid | 12.5 | 23.27 |
| AT2G36026.1 | Thale cress | nucleus, plastid | 11.82 | 19.13 |
| AT5G19650.1 | Thale cress | mitochondrion, nucleus | 14.19 | 19.0 |
| AT4G18830.1 | Thale cress | mitochondrion, nucleus, plastid | 19.26 | 16.33 |
| AT2G18500.1 | Thale cress | mitochondrion, plastid | 15.54 | 14.6 |
Protein Annotations
| MapMan:15.5.37 | EntrezGene:835948 | ProteinID:AED97042.1 | ArrayExpress:AT5G58360 | EnsemblPlantsGene:AT5G58360 | RefSeq:AT5G58360 |
| TAIR:AT5G58360 | RefSeq:AT5G58360-TAIR-G | EnsemblPlants:AT5G58360.1 | TAIR:AT5G58360.1 | Symbol:ATOFP3 | ProteinID:BAA96927.1 |
| InterPro:DNA_bnd_dom_ovate | EMBL:DQ056725 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045892 |
| InterPro:IPR006458 | RefSeq:NP_200644.1 | InterPro:Ovate | InterPro:Ovate_C | PFAM:PF04844 | PFAM:PF13724 |
| PO:PO:0000034 | PO:PO:0000035 | PO:PO:0000036 | PO:PO:0000115 | PO:PO:0000230 | PO:PO:0000282 |
| PO:PO:0003011 | PO:PO:0004723 | PO:PO:0005660 | PO:PO:0009005 | PFscan:PS51754 | PANTHER:PTHR33057 |
| PANTHER:PTHR33057:SF38 | UniProt:Q9LVL4 | TIGRFAMs:TIGR01568 | UniParc:UPI000009CA9E | SEG:seg | : |
Description
OFP3Transcription repressor OFP3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVL4]
Coordinates
chr5:-:23589550..23591197
Molecular Weight (calculated)
33442.1 Da
IEP (calculated)
10.707
GRAVY (calculated)
-0.807
Length
296 amino acids
Sequence
(BLAST)
(BLAST)
001: MKQKMGTHKF RFSDMMPHSW LYKLKGMSRS SRKHHLSSPK HLSSADASSS RKLRDPLRRL SSTAHHPQAS NSPPKSSSFK RKIKRKTVYK PSSRLKLSTS
101: SSLNHRSKSS SSANAISDSA VGSFLDRVSS PSDQNFVHDP EPHSSIDIKD ELSVRKLDDV PEDPSVSPNL SPETAKEPPF EMMTQQKLKK PKAHSSGIKI
201: PTKIVRKKKK ERTSQVSKKK GVVKSFAIVL SSVDPEKDFR ESMVEMIMEN KMREQKDLED LLACYLSLNS SEYHDVIIKA FENTWLHLTQ GLSISL
101: SSLNHRSKSS SSANAISDSA VGSFLDRVSS PSDQNFVHDP EPHSSIDIKD ELSVRKLDDV PEDPSVSPNL SPETAKEPPF EMMTQQKLKK PKAHSSGIKI
201: PTKIVRKKKK ERTSQVSKKK GVVKSFAIVL SSVDPEKDFR ESMVEMIMEN KMREQKDLED LLACYLSLNS SEYHDVIIKA FENTWLHLTQ GLSISL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.