Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G58360.1 | KRH03996 | AT1G62990.1 | 15781858 |
| AT5G58360.1 | KRH27981 | AT1G62990.1 | 15781858 |
| AT5G58360.1 | KRH57265 | AT1G62990.1 | 15781858 |
| AT5G58360.1 | KRH77464 | AT1G62990.1 | 15781858 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH17171 | Soybean | nucleus, plastid | 90.08 | 92.25 |
| KRG98156 | Soybean | nucleus | 74.41 | 74.03 |
| CDY32706 | Canola | cytosol | 9.4 | 72.0 |
| KRH30114 | Soybean | nucleus | 68.67 | 71.86 |
| CDY02814 | Canola | cytosol | 9.14 | 70.0 |
| PGSC0003DMT400078126 | Potato | nucleus | 39.69 | 43.3 |
| Solyc06g082460.1.1 | Tomato | nucleus | 38.64 | 42.17 |
| CDY43860 | Canola | nucleus | 31.07 | 41.03 |
| AT5G58360.1 | Thale cress | nucleus | 31.33 | 40.54 |
| CDY32990 | Canola | nucleus | 30.03 | 40.21 |
| KRH65447 | Soybean | nucleus | 40.47 | 40.05 |
| KRH40761 | Soybean | nucleus | 40.21 | 39.9 |
| GSMUA_Achr3P09850_001 | Banana | mitochondrion | 32.38 | 39.12 |
| KRH00468 | Soybean | nucleus | 37.34 | 38.96 |
| KRH76106 | Soybean | nucleus | 38.9 | 38.7 |
| Bra002657.1-P | Field mustard | nucleus | 31.33 | 35.09 |
| KRH50362 | Soybean | cytosol | 10.44 | 32.0 |
| KRH26670 | Soybean | mitochondrion | 12.53 | 25.81 |
| KRH22646 | Soybean | mitochondrion, nucleus | 12.01 | 25.0 |
| KRH67981 | Soybean | mitochondrion | 12.01 | 24.21 |
| KRH72226 | Soybean | mitochondrion | 10.97 | 24.14 |
| KRH25295 | Soybean | nucleus, plastid | 12.27 | 24.1 |
| KRH30374 | Soybean | nucleus, plastid | 12.27 | 23.86 |
| KRH32810 | Soybean | mitochondrion | 10.97 | 23.73 |
| KRG96237 | Soybean | mitochondrion | 11.49 | 23.04 |
| KRH51868 | Soybean | mitochondrion | 14.36 | 21.83 |
| KRH60283 | Soybean | mitochondrion, nucleus | 15.4 | 20.7 |
| KRH41574 | Soybean | mitochondrion, nucleus | 15.67 | 20.48 |
| KRH61189 | Soybean | mitochondrion | 13.32 | 19.69 |
| KRH11062 | Soybean | plastid | 18.28 | 18.92 |
| KRH21207 | Soybean | plastid | 19.06 | 17.63 |
| KRH42918 | Soybean | plastid | 18.8 | 17.43 |
| KRH59028 | Soybean | plastid | 18.28 | 17.11 |
Protein Annotations
| EntrezGene:100780926 | MapMan:15.5.37 | EMBL:ACUP02001244 | InterPro:DNA_bnd_dom_ovate | EnsemblPlantsGene:GLYMA_02G235600 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045892 | UniProt:I1JHL4 | InterPro:IPR006458 | EnsemblPlants:KRH72818 |
| ProteinID:KRH72818 | ProteinID:KRH72818.1 | InterPro:Ovate | InterPro:Ovate_C | PFAM:PF04844 | PFAM:PF13724 |
| PFscan:PS51754 | PANTHER:PTHR33057 | PANTHER:PTHR33057:SF38 | TIGRFAMs:TIGR01568 | UniParc:UPI0002337829 | SEG:seg |
Description
hypothetical protein
Coordinates
chr2:+:42300330..42301942
Molecular Weight (calculated)
43198.5 Da
IEP (calculated)
8.735
GRAVY (calculated)
-0.699
Length
383 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNNRFKLSD MIPNAWFYKL KDMSKSRKRN GSHAMKSKVS SPPTTTTSQR SLPRYSHYFS TEPIRAGKLY NTPIHTKDLD MPFTDSPRRS SKRRARRKTI
101: YKPSPTVVSS SFIPSSGYDS ANHWIKPCQV QSPDYDVSSA ESSSESDLHE YAYSESECDS FSVPDLLNGM DTNCSCRVSS STNDIIIDMN SESFLGNPEK
201: QDGFDAISQL GLAPILTRPV KFDDKVIEAA EVRSSTDLDE MQDDQSFSIE INKEESIRTQ RRRKSNHRKP FANSAGIRLR VNSPKLASRK VQACARRSVS
301: STASKGSRST GFPDGFAVVK SSFDPQSDFR ESMVEMIVEN NIRASKDLED LLACYLSLNS SEYHDLIVKA FEQIWFDLAQ LRM
101: YKPSPTVVSS SFIPSSGYDS ANHWIKPCQV QSPDYDVSSA ESSSESDLHE YAYSESECDS FSVPDLLNGM DTNCSCRVSS STNDIIIDMN SESFLGNPEK
201: QDGFDAISQL GLAPILTRPV KFDDKVIEAA EVRSSTDLDE MQDDQSFSIE INKEESIRTQ RRRKSNHRKP FANSAGIRLR VNSPKLASRK VQACARRSVS
301: STASKGSRST GFPDGFAVVK SSFDPQSDFR ESMVEMIVEN NIRASKDLED LLACYLSLNS SEYHDLIVKA FEQIWFDLAQ LRM
001: MGNYKFRISE MLPNAWFHKL KDVTKHSKPK NKASSSSSNT CSKKKPSSDS LPQHSYFSNS LVANNPPHHN SPRNSLHTKK MSKRKTLYKP SLKPLTPPPL
101: LVSASFNKSK INDQDSSYSL FPAIETSPES FVYSFYEEDD DDEFVEFSNF KINTKNKAFT KQKVKVIDSV EKACTASKPI KKPQKSHLSV KISRDEDDNE
201: YKAEKKYQRQ VSSGRKPSAG INLKRVNSPR IQLSGTRRST SRRSESKQDV LESFAVMKRS VDPKKDFRES MIEMIEENNI RASKDLEDLL ACYLTLNPKE
301: YHDLIIHVFE QIWLQLTKTK
101: LVSASFNKSK INDQDSSYSL FPAIETSPES FVYSFYEEDD DDEFVEFSNF KINTKNKAFT KQKVKVIDSV EKACTASKPI KKPQKSHLSV KISRDEDDNE
201: YKAEKKYQRQ VSSGRKPSAG INLKRVNSPR IQLSGTRRST SRRSESKQDV LESFAVMKRS VDPKKDFRES MIEMIEENNI RASKDLEDLL ACYLTLNPKE
301: YHDLIIHVFE QIWLQLTKTK
Arabidopsis Description
OFP2Transcription repressor OFP2 [Source:UniProtKB/Swiss-Prot;Acc:O04351]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.