CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH00468	Soybean	nucleus	88.6	93.19
KRH65447	Soybean	nucleus	60.62	60.47
KRH76106	Soybean	nucleus	58.55	58.7
Solyc09g018200.1.1	Tomato	nucleus	35.75	54.98
VIT_08s0058g01110.t01	Wine grape	nucleus	54.66	50.12
PGSC0003DMT400011286	Potato	nucleus	36.27	49.3
Solyc10g076180.1.1	Tomato	nucleus	37.05	44.55
KRH72818	Soybean	nucleus	39.9	40.21
KRG98156	Soybean	nucleus	38.86	38.96
KRH30114	Soybean	nucleus	36.79	38.8
KRH17171	Soybean	nucleus, plastid	37.56	38.77
KRH50362	Soybean	cytosol	10.1	31.2
KRH25295	Soybean	nucleus, plastid	12.44	24.62
KRH22646	Soybean	mitochondrion, nucleus	11.66	24.46
KRH30374	Soybean	nucleus, plastid	12.18	23.86
KRH26670	Soybean	mitochondrion	11.4	23.66
KRG96237	Soybean	mitochondrion	11.4	23.04
KRH67981	Soybean	mitochondrion	11.14	22.63
KRH32810	Soybean	mitochondrion	10.1	22.03
KRH60283	Soybean	mitochondrion, nucleus	15.8	21.4
KRH72226	Soybean	mitochondrion	9.59	21.26
KRH41574	Soybean	mitochondrion, nucleus	15.54	20.48
KRH51868	Soybean	mitochondrion	12.95	19.84
KRH11062	Soybean	plastid	18.91	19.73
KRH21207	Soybean	plastid	20.98	19.57
KRH59028	Soybean	plastid	19.43	18.34
KRH61189	Soybean	mitochondrion	12.18	18.15
KRH42918	Soybean	plastid	19.17	17.92

Protein Annotations

EntrezGene:100817790	MapMan:15.5.37	EMBL:ACUP02006053	ncoils:Coil	InterPro:DNA_bnd_dom_ovate	EnsemblPlantsGene:GLYMA_09G276400
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045892	InterPro:IPR006458	UniProt:K7LGH6
EnsemblPlants:KRH40761	ProteinID:KRH40761	ProteinID:KRH40761.1	InterPro:Ovate	InterPro:Ovate_C	PFAM:PF04844
PFAM:PF13724	PFscan:PS51754	PANTHER:PTHR33057	PANTHER:PTHR33057:SF22	TIGRFAMs:TIGR01568	UniParc:UPI00023C9082
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:49184890..49186050

Molecular Weight (calculated)

43917.5 Da

IEP (calculated)

10.356

GRAVY (calculated)

-1.000

Length

386 amino acids

Sequence
(BLAST)

001: MGNYRFKLSD IIPNAWFYKL KDMGKTRKQT QTTNSRKKKQ PSPVSTTKPS KPKQPHQYNL RKSYYFTREL TPNDRIYSSP TPTNNQNAKD NNSPEPPRKS
101: SKQRLKKRTS RTSSPKLLVV SNNNNSSSSP HDNSSTESSE HPDPEFRTDR VLPTESFDET VPWANSCACR VHSNTKDIII DVDNNSIARK DDKLEGYDYE
201: CDSFSDLVLP PIVTKPAKFN DLLSDAKKKE TKTRSKMAAH EEEPNLNKGP LRVKIVKEDT ASMKGQKNNY GRRFSVSSPG VRLRMNSPRI ASRRVQANGR
301: RSVSSAAAAA AARRSLSDSF AVVKSSLNPQ RDFRESMVEM IVQNNIRTSK DLEDLLACYL SLNSDEYHDL IIKVFKQIWF DLTDNN

Best Arabidopsis Sequence Match ( AT5G01840.1 )
(BLAST)

001: MGNNYRFKLS ELIPNAWFYK LRDMSKSKKK NLQSQPNSTT SKKKHHAVPT PTSTTPLSPR PPRRPSHSSK APPSHPPRKS SGNRLRHRAT VDSKSSTTSG
101: DSTTTETGSF SPDFRSDQVL LPDESLTGSW HSPCSSKLSK TATFTPPPEL ELRPIITKTA ATARKTAVNS PAGVRLRMRS PRISVSSSAR RSGSSARRSR
201: AVVKASVDPK RDFKESMEEM IAENKIRATK DLEELLACYL CLNSDEYHAI IINVFKQIWL DLNLPPPHSK

Arabidopsis Description

OFP1Transcription repressor OFP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZW2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.