Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH27981 | Soybean | nucleus | 96.44 | 97.13 |
| KRH57265 | Soybean | nucleus | 92.53 | 88.74 |
| KRH03996 | Soybean | nucleus | 91.81 | 88.36 |
| VIT_02s0025g04630.t01 | Wine grape | nucleus | 87.9 | 84.88 |
| AT1G62990.1 | Thale cress | nucleus | 81.49 | 78.69 |
| Bra036636.1-P | Field mustard | nucleus | 81.49 | 77.89 |
| CDY66559 | Canola | nucleus | 81.49 | 77.89 |
| PGSC0003DMT400058528 | Potato | nucleus | 86.12 | 77.56 |
| CDY64892 | Canola | nucleus | 81.14 | 77.55 |
| CDX93852 | Canola | nucleus | 61.21 | 77.48 |
| Solyc08g080120.2.1 | Tomato | nucleus | 85.41 | 77.42 |
| CDY45968 | Canola | nucleus | 79.36 | 76.11 |
| Bra027006.1-P | Field mustard | nucleus | 79.0 | 75.25 |
| GSMUA_Achr1P03660_001 | Banana | nucleus | 77.22 | 74.57 |
| Zm00001d027431_P002 | Maize | nucleus | 75.09 | 68.06 |
| Zm00001d048471_P001 | Maize | nucleus | 76.16 | 67.3 |
| TraesCS4D01G341000.1 | Wheat | nucleus | 74.38 | 67.2 |
| TraesCS5A01G515000.1 | Wheat | nucleus | 74.38 | 66.99 |
| TraesCS4B01G346100.1 | Wheat | nucleus | 74.38 | 66.99 |
| Os03t0123500-02 | Rice | nucleus | 74.73 | 66.88 |
| HORVU4Hr1G084680.1 | Barley | nucleus | 74.73 | 66.67 |
| KXG40306 | Sorghum | nucleus | 76.16 | 66.25 |
| KRH03552 | Soybean | nucleus | 65.48 | 53.33 |
| KRH20116 | Soybean | nucleus | 65.48 | 53.18 |
| KRG98594 | Soybean | extracellular | 14.59 | 50.0 |
| KRH12889 | Soybean | nucleus | 64.77 | 49.19 |
| KRH37876 | Soybean | nucleus | 64.06 | 48.78 |
| KRH52385 | Soybean | nucleus | 68.33 | 48.24 |
| KRH15810 | Soybean | nucleus | 69.39 | 47.33 |
| KRH61712 | Soybean | nucleus | 68.68 | 46.96 |
| KRH05245 | Soybean | nucleus | 68.33 | 46.72 |
| KRG99390 | Soybean | nucleus | 17.44 | 37.4 |
| KRH73380 | Soybean | nucleus | 7.47 | 32.31 |
| KRH33819 | Soybean | nucleus | 30.25 | 28.72 |
| KRH02013 | Soybean | nucleus | 26.33 | 27.51 |
| KRG90534 | Soybean | nucleus | 29.54 | 27.04 |
| KRH68434 | Soybean | nucleus | 29.54 | 27.04 |
| KRG96717 | Soybean | nucleus | 29.18 | 26.37 |
| KRH69600 | Soybean | nucleus | 28.83 | 26.3 |
| KRH63561 | Soybean | nucleus | 25.98 | 26.26 |
| KRH74562 | Soybean | nucleus | 28.83 | 26.21 |
| KRH45633 | Soybean | nucleus | 28.11 | 24.61 |
| KRH61471 | Soybean | nucleus | 28.11 | 21.88 |
| KRH15482 | Soybean | nucleus | 29.18 | 21.3 |
| KRG88661 | Soybean | nucleus | 29.18 | 21.19 |
| KRH51140 | Soybean | nucleus | 27.05 | 20.99 |
| KRH14756 | Soybean | nucleus | 24.2 | 20.92 |
| KRH11492 | Soybean | nucleus | 27.4 | 20.53 |
| KRH36506 | Soybean | nucleus | 26.69 | 19.79 |
| KRH73381 | Soybean | cytosol | 12.81 | 15.65 |
| KRG99387 | Soybean | nucleus | 9.96 | 14.58 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100808872 | MapMan:15.5.3.4 | EMBL:ACUP02000673 | InterPro:ELK_dom | EnsemblPlantsGene:GLYMA_01G214800 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | UniProt:I1JA22 |
| InterPro:IPR001356 | InterPro:IPR005539 | InterPro:KNOX1 | InterPro:KNOX2 | EnsemblPlants:KRH77464 | ProteinID:KRH77464 |
| ProteinID:KRH77464.1 | PFAM:PF03790 | PFAM:PF03791 | PFAM:PF05920 | PFscan:PS50071 | PFscan:PS51213 |
| PANTHER:PTHR11850 | PANTHER:PTHR11850:SF192 | SMART:SM00389 | SMART:SM01255 | SMART:SM01256 | SUPFAM:SSF46689 |
| UniParc:UPI00023BDB67 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:54571322..54578057
Molecular Weight (calculated)
32147.3 Da
IEP (calculated)
6.931
GRAVY (calculated)
-0.636
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MQEPSLGLMG EVSGDHHRQL KAEITTHPLY EQLLAAHVAC LRVATPIDQL PLIDAQLSQS HHLLRSYVSH NTHSLSPHHR QELDNFLAQY LIVLCTFKEQ
101: LQQHVRVHAV EAVMACRDIE NALQALTGVS LGEGTGATMS DDEDDLQMDI SLDQSSAEGH DMMGFGPLLP TESERSLMER VRQELKIELK QGFKSRIEDV
201: REEILRKRRA GKLPGDTTSV LKNWWQQHAK WPYPTEDDKA KLVEETGLQL KQINNWFINQ RKRNWHSNSQ SVTSLKSKRK R
101: LQQHVRVHAV EAVMACRDIE NALQALTGVS LGEGTGATMS DDEDDLQMDI SLDQSSAEGH DMMGFGPLLP TESERSLMER VRQELKIELK QGFKSRIEDV
201: REEILRKRRA GKLPGDTTSV LKNWWQQHAK WPYPTEDDKA KLVEETGLQL KQINNWFINQ RKRNWHSNSQ SVTSLKSKRK R
001: MQEAALGMMG ATVGGDGDTA VVAEQNRQLK GEIATHPMYE QLLAAHVACL RVATPIDQLP IIEAQLSQSH HLLRSYASTA VGYHHDRHEL DNFLAQYVMV
101: LCSFKEQLQQ HVRVHAVEAV MACREIENNL HSLTGATLGE GSGATMSEDE DDLPMDFSSD NSGVDFSGGH DMTGFGPLLP TESERSLMER VRQELKLELK
201: QGFKSRIEDV REEIMRKRRA GKLPGDTTTV LKNWWQQHCK WPYPTEDDKA KLVEETGLQL KQINNWFINQ RKRNWHNNSH SLTSLKSKRK H
101: LCSFKEQLQQ HVRVHAVEAV MACREIENNL HSLTGATLGE GSGATMSEDE DDLPMDFSSD NSGVDFSGGH DMTGFGPLLP TESERSLMER VRQELKLELK
201: QGFKSRIEDV REEIMRKRRA GKLPGDTTTV LKNWWQQHCK WPYPTEDDKA KLVEETGLQL KQINNWFINQ RKRNWHNNSH SLTSLKSKRK H
Arabidopsis Description
KNAT7Homeobox protein knotted-1-like 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPQ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.