Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027006.1-P | Field mustard | nucleus | 96.93 | 96.27 |
| CDY64892 | Canola | nucleus | 95.9 | 95.58 |
| CDY66559 | Canola | nucleus | 95.22 | 94.9 |
| AT1G62990.1 | Thale cress | nucleus | 93.86 | 94.5 |
| CDX93852 | Canola | nucleus | 67.24 | 88.74 |
| KRH27981 | Soybean | nucleus | 76.79 | 80.65 |
| KRH77464 | Soybean | nucleus | 76.11 | 79.36 |
| VIT_02s0025g04630.t01 | Wine grape | nucleus | 77.13 | 77.66 |
| KRH03996 | Soybean | nucleus | 76.11 | 76.37 |
| KRH57265 | Soybean | nucleus | 75.77 | 75.77 |
| PGSC0003DMT400058528 | Potato | nucleus | 78.84 | 74.04 |
| Solyc08g080120.2.1 | Tomato | nucleus | 77.82 | 73.55 |
| GSMUA_Achr1P03660_001 | Banana | nucleus | 70.65 | 71.13 |
| Zm00001d027431_P002 | Maize | nucleus | 71.67 | 67.74 |
| Os03t0123500-02 | Rice | nucleus | 71.33 | 66.56 |
| Zm00001d048471_P001 | Maize | nucleus | 71.33 | 65.72 |
| KXG40306 | Sorghum | nucleus | 72.35 | 65.63 |
| TraesCS5A01G515000.1 | Wheat | nucleus | 69.62 | 65.38 |
| TraesCS4B01G346100.1 | Wheat | nucleus | 69.62 | 65.38 |
| TraesCS4D01G341000.1 | Wheat | nucleus | 69.28 | 65.27 |
| HORVU4Hr1G084680.1 | Barley | nucleus | 69.62 | 64.76 |
| CDX88165 | Canola | nucleus | 61.77 | 60.54 |
| CDX78407 | Canola | nucleus | 60.75 | 46.11 |
| CDY05371 | Canola | nucleus | 62.46 | 45.3 |
| CDX85732 | Canola | nucleus | 60.75 | 45.29 |
| CDX75215 | Canola | nucleus | 57.68 | 45.19 |
| CDY51104 | Canola | nucleus | 60.41 | 45.04 |
| CDX68812 | Canola | nucleus | 57.34 | 44.92 |
| CDY13472 | Canola | nucleus | 58.36 | 44.76 |
| CDY05480 | Canola | nucleus | 62.8 | 43.81 |
| CDX72343 | Canola | nucleus | 58.7 | 43.0 |
| CDX80491 | Canola | nucleus | 62.8 | 41.44 |
| CDY41449 | Canola | nucleus | 17.06 | 41.32 |
| CDX70374 | Canola | nucleus | 37.88 | 36.76 |
| CDY34012 | Canola | nucleus | 18.77 | 28.5 |
| CDY69524 | Canola | nucleus | 18.77 | 26.96 |
| CDY70923 | Canola | nucleus | 18.09 | 25.85 |
| CDX91713 | Canola | nucleus | 27.3 | 25.48 |
| CDY03742 | Canola | nucleus | 27.99 | 25.08 |
| CDY09448 | Canola | nucleus | 27.99 | 25.08 |
| CDX83145 | Canola | nucleus | 27.65 | 20.15 |
| CDY19545 | Canola | nucleus | 24.91 | 19.06 |
| CDY12943 | Canola | nucleus | 24.91 | 19.06 |
| CDY68624 | Canola | nucleus | 20.14 | 16.91 |
| CDY04722 | Canola | nucleus | 12.63 | 16.74 |
| CDY44142 | Canola | nucleus | 12.97 | 16.17 |
| CDY41448 | Canola | nucleus | 10.24 | 14.42 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.4 | GO:A0A078I9X1 | UniProt:A0A078I9X1 | EnsemblPlants:CDY45968 | ProteinID:CDY45968 |
| ProteinID:CDY45968.1 | InterPro:ELK_dom | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00082979001 | InterPro:Homeobox-like_sf |
| InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR005539 | InterPro:KNOX1 | InterPro:KNOX2 |
| PFAM:PF03790 | PFAM:PF03791 | PFAM:PF05920 | PFscan:PS50071 | PFscan:PS51213 | PANTHER:PTHR11850 |
| PANTHER:PTHR11850:SF74 | SMART:SM00389 | SMART:SM01188 | SMART:SM01255 | SMART:SM01256 | SUPFAM:SSF46689 |
| UniParc:UPI0004EDC5A7 | : | : | : | : | : |
Description
BnaA09g12980DHomeobox protein knotted-1-like 7 [Source:Projected from Arabidopsis thaliana (AT1G62990) UniProtKB/Swiss-Prot;Acc:Q9FPQ8]
Coordinates
chrLK032644:+:83031..87269
Molecular Weight (calculated)
33019.1 Da
IEP (calculated)
6.301
GRAVY (calculated)
-0.571
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEAALGMIG ATVGGGDGDE VLVAEQNRQM KGEIASHTMC EQLLAAHVAC LRVATPIDQL PIIEAQLSHS EHLLRSYAST AVGFSHHDRH ELDNFLAQYV
101: MVLCSFKEQL QQHVRVHAVE AVMACREIEN NLHSLTGATL GEGSGATMSE DEDDLHMDLS SDNSGVDFSG GHDMTGFGPL LPTESERSLM ERVRQELKIE
201: LKQGFKSRIE DVREEIMRKR RAGKLPGDTT TVLKNWWQQH CKWPYPTEDD KAKLVEETGL QLKQINNWFI NQRKRNWHSN SHSLTSLKSK RKH
101: MVLCSFKEQL QQHVRVHAVE AVMACREIEN NLHSLTGATL GEGSGATMSE DEDDLHMDLS SDNSGVDFSG GHDMTGFGPL LPTESERSLM ERVRQELKIE
201: LKQGFKSRIE DVREEIMRKR RAGKLPGDTT TVLKNWWQQH CKWPYPTEDD KAKLVEETGL QLKQINNWFI NQRKRNWHSN SHSLTSLKSK RKH
001: MQEAALGMMG ATVGGDGDTA VVAEQNRQLK GEIATHPMYE QLLAAHVACL RVATPIDQLP IIEAQLSQSH HLLRSYASTA VGYHHDRHEL DNFLAQYVMV
101: LCSFKEQLQQ HVRVHAVEAV MACREIENNL HSLTGATLGE GSGATMSEDE DDLPMDFSSD NSGVDFSGGH DMTGFGPLLP TESERSLMER VRQELKLELK
201: QGFKSRIEDV REEIMRKRRA GKLPGDTTTV LKNWWQQHCK WPYPTEDDKA KLVEETGLQL KQINNWFINQ RKRNWHNNSH SLTSLKSKRK H
101: LCSFKEQLQQ HVRVHAVEAV MACREIENNL HSLTGATLGE GSGATMSEDE DDLPMDFSSD NSGVDFSGGH DMTGFGPLLP TESERSLMER VRQELKLELK
201: QGFKSRIEDV REEIMRKRRA GKLPGDTTTV LKNWWQQHCK WPYPTEDDKA KLVEETGLQL KQINNWFINQ RKRNWHNNSH SLTSLKSKRK H
Arabidopsis Description
KNAT7Homeobox protein knotted-1-like 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPQ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.