Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83145 | Canola | nucleus | 94.27 | 81.84 |
| Bra000638.1-P | Field mustard | nucleus | 90.54 | 81.65 |
| AT4G08150.1 | Thale cress | nucleus | 80.8 | 70.85 |
| CDY34012 | Canola | nucleus | 34.1 | 61.66 |
| Os03t0673000-00 | Rice | nucleus | 12.32 | 55.84 |
| VIT_18s0001g08380.t01 | Wine grape | nucleus | 53.3 | 50.27 |
| Solyc04g077210.2.1 | Tomato | nucleus | 47.56 | 46.76 |
| PGSC0003DMT400012712 | Potato | nucleus | 47.85 | 46.39 |
| KRH61471 | Soybean | nucleus | 47.56 | 45.98 |
| GSMUA_Achr4P28270_001 | Banana | nucleus | 34.96 | 45.02 |
| GSMUA_Achr7P08050_001 | Banana | nucleus | 33.81 | 44.36 |
| GSMUA_Achr5P01960_001 | Banana | nucleus | 24.07 | 43.75 |
| GSMUA_Achr2P13200_001 | Banana | nucleus | 43.27 | 43.02 |
| TraesCS2D01G256400.1 | Wheat | nucleus | 42.12 | 42.36 |
| TraesCS2B01G268200.1 | Wheat | nucleus | 42.12 | 42.36 |
| TraesCS2A01G267400.1 | Wheat | nucleus | 42.12 | 42.36 |
| Os07t0129700-01 | Rice | nucleus | 42.69 | 41.97 |
| EER95833 | Sorghum | nucleus | 42.69 | 41.85 |
| Zm00001d018742_P001 | Maize | nucleus | 41.55 | 41.31 |
| GSMUA_Achr7P27540_001 | Banana | nucleus | 40.97 | 40.86 |
| Zm00001d007842_P002 | Maize | nucleus | 41.83 | 40.56 |
| CDY41449 | Canola | nucleus | 14.04 | 40.5 |
| HORVU2Hr1G061320.3 | Barley | nucleus, plastid | 40.97 | 39.94 |
| GSMUA_Achr4P03120_001 | Banana | nucleus | 32.95 | 39.66 |
| GSMUA_Achr3P26230_001 | Banana | nucleus | 36.39 | 39.44 |
| Os03t0727000-02 | Rice | nucleus | 40.69 | 39.34 |
| HORVU4Hr1G009730.1 | Barley | nucleus | 40.97 | 39.29 |
| Zm00001d033859_P002 | Maize | nucleus | 40.4 | 39.28 |
| TraesCS4A01G256700.1 | Wheat | nucleus | 40.69 | 39.23 |
| TraesCS4D01G058000.1 | Wheat | nucleus | 40.69 | 39.23 |
| GSMUA_Achr4P32230_001 | Banana | nucleus | 38.68 | 39.13 |
| TraesCS4B01G057900.1 | Wheat | nucleus | 40.69 | 39.12 |
| GSMUA_Achr6P04640_001 | Banana | nucleus | 39.83 | 38.94 |
| EER90950 | Sorghum | nucleus | 40.11 | 38.89 |
| TraesCS5B01G410600.1 | Wheat | nucleus | 34.96 | 38.61 |
| TraesCS5A01G405900.1 | Wheat | nucleus | 36.1 | 37.84 |
| TraesCS5D01G415900.1 | Wheat | nucleus | 36.1 | 37.17 |
| GSMUA_Achr10P... | Banana | nucleus | 27.51 | 36.92 |
| EER91090 | Sorghum | nucleus | 33.52 | 35.03 |
| Zm00001d013559_P001 | Maize | cytosol, mitochondrion, nucleus | 16.33 | 34.97 |
| OQU90921 | Sorghum | nucleus | 34.67 | 34.67 |
| TraesCS4A01G292200.1 | Wheat | nucleus | 31.23 | 34.17 |
| CDX91713 | Canola | nucleus | 30.37 | 33.76 |
| TraesCS4B01G021900.2 | Wheat | nucleus | 31.23 | 33.54 |
| HORVU4Hr1G003360.1 | Barley | nucleus | 30.37 | 33.02 |
| TraesCS4D01G019600.1 | Wheat | nucleus | 31.52 | 32.35 |
| TraesCS4A01G292000.1 | Wheat | cytosol, nucleus, plastid | 14.04 | 32.24 |
| Os03t0771500-01 | Rice | nucleus | 30.95 | 32.14 |
| OQU91064 | Sorghum | nucleus | 34.1 | 32.08 |
| Zm00001d033861_P001 | Maize | nucleus | 32.95 | 31.94 |
| Os03t0727200-00 | Rice | nucleus | 32.66 | 31.23 |
| HORVU5Hr1G098570.6 | Barley | plastid | 35.82 | 30.79 |
| Zm00001d033404_P002 | Maize | nucleus | 32.66 | 30.73 |
| TraesCS4A01G251800.1 | Wheat | nucleus | 14.61 | 30.72 |
| CDY09448 | Canola | nucleus | 28.65 | 30.58 |
| CDY04722 | Canola | nucleus | 19.2 | 30.32 |
| CDY03742 | Canola | nucleus | 28.37 | 30.28 |
| TraesCS4D01G019800.1 | Wheat | nucleus | 27.79 | 30.12 |
| CDY41448 | Canola | nucleus | 17.77 | 29.81 |
| TraesCS4B01G022000.1 | Wheat | nucleus | 25.5 | 29.67 |
| CDY12943 | Canola | nucleus | 32.38 | 29.5 |
| CDY19545 | Canola | nucleus | 32.38 | 29.5 |
| TraesCS4D01G019900.1 | Wheat | nucleus | 27.51 | 29.45 |
| TraesCS4A01G291900.1 | Wheat | nucleus | 26.93 | 28.57 |
| CDY44142 | Canola | nucleus | 19.2 | 28.51 |
| TraesCS4A01G292100.1 | Wheat | nucleus | 26.93 | 28.48 |
| HORVU4Hr1G003410.3 | Barley | nucleus | 28.08 | 27.76 |
| Os03t0673500-00 | Rice | nucleus | 26.93 | 27.33 |
| CDY69524 | Canola | nucleus | 15.47 | 26.47 |
| Zm00001d034212_P001 | Maize | nucleus | 36.1 | 26.03 |
| CDY70923 | Canola | nucleus | 14.9 | 25.37 |
| Os03t0772100-00 | Rice | vacuole | 24.93 | 20.91 |
| CDY64892 | Canola | nucleus | 17.19 | 20.41 |
| CDY66559 | Canola | nucleus | 17.19 | 20.41 |
| CDX88165 | Canola | nucleus | 17.48 | 20.4 |
| CDY45968 | Canola | nucleus | 16.91 | 20.14 |
| CDX68812 | Canola | nucleus | 19.48 | 18.18 |
| CDX93852 | Canola | nucleus | 11.46 | 18.02 |
| CDX75215 | Canola | nucleus | 19.2 | 17.91 |
| CDX78407 | Canola | nucleus | 19.48 | 17.62 |
| CDY13472 | Canola | nucleus | 18.91 | 17.28 |
| CDY51104 | Canola | nucleus | 19.2 | 17.05 |
| CDX85732 | Canola | nucleus | 19.2 | 17.05 |
| CDY05371 | Canola | nucleus | 19.2 | 16.58 |
| CDX72343 | Canola | nucleus | 18.91 | 16.5 |
| CDY05480 | Canola | nucleus | 19.2 | 15.95 |
| CDX70374 | Canola | nucleus | 13.18 | 15.23 |
| CDX80491 | Canola | nucleus | 18.34 | 14.41 |
Protein Annotations
| MapMan:15.5.3.4 | GO:A0A078JPB1 | UniProt:A0A078JPB1 | EnsemblPlants:CDY68624 | ProteinID:CDY68624 | ProteinID:CDY68624.1 |
| InterPro:ELK_dom | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00076488001 | InterPro:IPR005539 | InterPro:KNOX1 |
| InterPro:KNOX2 | PFAM:PF03789 | PFAM:PF03790 | PFAM:PF03791 | PFscan:PS51213 | PANTHER:PTHR11850 |
| PANTHER:PTHR11850:SF203 | SMART:SM01188 | SMART:SM01255 | SMART:SM01256 | UniParc:UPI0004EDE739 | SEG:seg |
Description
BnaCnng59830DBnaCnng59830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JPB1]
Coordinates
chrLK037682:-:1083..2862
Molecular Weight (calculated)
40196.9 Da
IEP (calculated)
6.631
GRAVY (calculated)
-0.845
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEYQHESRS TPHRVSFLYS PISSSNKNDN TTTNNNNTNY GSGYNNTNNN NHQQHMLFPH MSSLFPQTTE NCFRSDHDQP TNASVKSEAS SSRINHYSML
101: MKAIHNTQET NNNNNNNDTE SMKAKIIAHP HYSTLLHAYL DCQKIGAPPE VVDKITAARQ EFEARQQRPT ASVTALSSDP ELDQFMWVVS SSAYVKSLFL
201: FEAYCDMLVK YREELTRPIE EAMEYIRRIE SQISMLCQGP IHILNNPDGK SEGIESSDEE QDNNNSGGEA ELPEIDPRAE DRELKNHLLK KYSGYLSSLK
301: QELSKKKKKG KLPKEARQKL LTWWELHYKW PYPSVRIILL LSLYAFSFF
101: MKAIHNTQET NNNNNNNDTE SMKAKIIAHP HYSTLLHAYL DCQKIGAPPE VVDKITAARQ EFEARQQRPT ASVTALSSDP ELDQFMWVVS SSAYVKSLFL
201: FEAYCDMLVK YREELTRPIE EAMEYIRRIE SQISMLCQGP IHILNNPDGK SEGIESSDEE QDNNNSGGEA ELPEIDPRAE DRELKNHLLK KYSGYLSSLK
301: QELSKKKKKG KLPKEARQKL LTWWELHYKW PYPSVRIILL LSLYAFSFF
001: MEEYQHDNST TPQRVSFLYS PISSSNKNDN TSDTNNNNNN NNSSNYGPGY NNTNNNNHHH QHMLFPHMSS LLPQTTENCF RSDHDQPNNN NNPSVKSEAS
101: SSRINHYSML MRAIHNTQEA NNNNNDNVSD VEAMKAKIIA HPHYSTLLQA YLDCQKIGAP PDVVDRITAA RQDFEARQQR STPSVSASSR DPELDQFMEA
201: YCDMLVKYRE ELTRPIQEAM EFIRRIESQL SMLCQSPIHI LNNPDGKSDN MGSSDEEQEN NSGGETELPE IDPRAEDREL KNHLLKKYSG YLSSLKQELS
301: KKKKKGKLPK EARQKLLTWW ELHYKWPYPS ESEKVALAES TGLDQKQINN WFINQRKRHW KPSEDMQFMV MDGLQHPHHA ALYMDGHYMG DGPYRLGP
101: SSRINHYSML MRAIHNTQEA NNNNNDNVSD VEAMKAKIIA HPHYSTLLQA YLDCQKIGAP PDVVDRITAA RQDFEARQQR STPSVSASSR DPELDQFMEA
201: YCDMLVKYRE ELTRPIQEAM EFIRRIESQL SMLCQSPIHI LNNPDGKSDN MGSSDEEQEN NSGGETELPE IDPRAEDREL KNHLLKKYSG YLSSLKQELS
301: KKKKKGKLPK EARQKLLTWW ELHYKWPYPS ESEKVALAES TGLDQKQINN WFINQRKRHW KPSEDMQFMV MDGLQHPHHA ALYMDGHYMG DGPYRLGP
Arabidopsis Description
KNAT1Homeobox protein knotted-1-like 1 [Source:UniProtKB/Swiss-Prot;Acc:P46639]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.