Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46209 | Canola | nucleus | 81.19 | 83.33 |
| AT2G16400.1 | Thale cress | nucleus | 73.2 | 58.92 |
| CDY02261 | Canola | nucleus | 66.49 | 57.46 |
| CDX89711 | Canola | nucleus | 66.75 | 56.92 |
| CDX83753 | Canola | nucleus | 17.27 | 35.26 |
| GSMUA_Achr1P23300_001 | Banana | extracellular | 38.14 | 34.26 |
| GSMUA_Achr3P29230_001 | Banana | nucleus | 34.02 | 29.2 |
| GSMUA_Achr9P21580_001 | Banana | nucleus | 40.98 | 29.12 |
| CDY45321 | Canola | nucleus, plastid | 51.03 | 28.91 |
| CDX73171 | Canola | nucleus | 21.39 | 28.72 |
| CDY47523 | Canola | nucleus | 20.88 | 28.03 |
| GSMUA_Achr4P13590_001 | Banana | nucleus | 40.98 | 27.94 |
| CDY63699 | Canola | nucleus | 29.64 | 27.51 |
| CDY29411 | Canola | nucleus | 27.58 | 27.51 |
| VIT_03s0038g00050.t01 | Wine grape | nucleus | 46.65 | 26.19 |
| CDY52073 | Canola | nucleus | 30.93 | 25.48 |
| CDX75307 | Canola | nucleus | 14.43 | 25.23 |
| CDX68129 | Canola | nucleus | 30.15 | 24.74 |
| CDY39031 | Canola | nucleus | 30.15 | 24.48 |
| CDX73170 | Canola | nucleus | 31.96 | 24.12 |
| CDY47524 | Canola | nucleus | 31.96 | 24.03 |
| GSMUA_Achr4P06630_001 | Banana | nucleus | 34.54 | 23.67 |
| KXG24130 | Sorghum | nucleus | 38.66 | 22.8 |
| TraesCS4A01G289400.1 | Wheat | nucleus | 37.37 | 22.73 |
| TraesCS4D01G022600.1 | Wheat | nucleus | 37.11 | 22.57 |
| TraesCS4B01G025500.1 | Wheat | nucleus | 37.11 | 22.54 |
| EER91079 | Sorghum | nucleus | 37.63 | 22.5 |
| Zm00001d013547_P002 | Maize | nucleus | 36.86 | 22.38 |
| CDX96653 | Canola | nucleus | 29.12 | 22.33 |
| CDX85896 | Canola | nucleus | 28.87 | 22.27 |
| Os12t0636200-01 | Rice | nucleus | 37.11 | 22.26 |
| Zm00001d031182_P002 | Maize | nucleus | 38.14 | 22.16 |
| HORVU4Hr1G003800.7 | Barley | nucleus | 36.6 | 22.05 |
| TraesCS5A01G007800.1 | Wheat | nucleus | 36.86 | 22.0 |
| TraesCS5D01G013300.1 | Wheat | nucleus | 36.86 | 22.0 |
| Zm00001d033378_P003 | Maize | nucleus | 36.86 | 21.97 |
| CDY39359 | Canola | nucleus | 29.38 | 21.97 |
| HORVU5Hr1G001090.1 | Barley | nucleus | 36.6 | 21.88 |
| CDY40420 | Canola | nucleus | 35.31 | 21.68 |
| CDY30566 | Canola | nucleus | 25.0 | 21.65 |
| TraesCS5B01G006400.1 | Wheat | nucleus | 37.11 | 21.4 |
| CDY32069 | Canola | nucleus | 35.05 | 21.38 |
| CDX77099 | Canola | nucleus | 24.74 | 21.38 |
| Os03t0680800-02 | Rice | nucleus | 35.57 | 20.44 |
| CDX84585 | Canola | nucleus | 35.31 | 20.42 |
| CDX84171 | Canola | nucleus | 30.93 | 20.41 |
| CDX79646 | Canola | nucleus | 35.31 | 19.83 |
| CDX75085 | Canola | nucleus | 31.19 | 19.27 |
| CDY45383 | Canola | nucleus | 12.37 | 18.25 |
| CDY55113 | Canola | nucleus | 23.97 | 17.78 |
| CDX80798 | Canola | nucleus | 24.23 | 17.67 |
| CDX76849 | Canola | nucleus | 26.8 | 17.3 |
| CDY46061 | Canola | nucleus | 27.06 | 17.27 |
| CDY69132 | Canola | nucleus | 25.0 | 16.9 |
| CDY10473 | Canola | nucleus | 25.0 | 16.87 |
| GSMUA_Achr2P06420_001 | Banana | nucleus | 15.98 | 16.8 |
| CDY40327 | Canola | nucleus | 24.74 | 16.61 |
| CDX68925 | Canola | cytosol | 7.73 | 16.57 |
| CDY48107 | Canola | nucleus | 24.48 | 16.52 |
| CDY44476 | Canola | nucleus | 23.97 | 16.37 |
| CDY39669 | Canola | nucleus | 26.8 | 16.12 |
| CDY62523 | Canola | nucleus | 26.8 | 16.05 |
| CDY21826 | Canola | extracellular, plastid | 3.87 | 15.62 |
| CDX68927 | Canola | nucleus | 18.56 | 15.62 |
| CDX75604 | Canola | nucleus | 26.8 | 15.55 |
| CDY24765 | Canola | nucleus | 26.29 | 15.29 |
| CDX69252 | Canola | nucleus | 26.29 | 15.29 |
| CDX75313 | Canola | nucleus | 18.04 | 15.02 |
| CDY22463 | Canola | nucleus | 25.77 | 14.93 |
| CDY13511 | Canola | nucleus | 16.75 | 14.87 |
| CDX72383 | Canola | nucleus | 16.49 | 14.16 |
| CDX68906 | Canola | nucleus | 6.19 | 9.27 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.5 | GO:A0A078C542 | EnsemblPlants:CDX71279 | ProteinID:CDX71279 | ProteinID:CDX71279.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00144904001 |
| InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF05920 | PFAM:PF07526 |
| InterPro:POX_dom | PFscan:PS50071 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF65 | SMART:SM00389 | SMART:SM00574 |
| SUPFAM:SSF46689 | UniParc:UPI0004EACA88 | SEG:seg | : | : | : |
Description
BnaC07g05580D
Coordinates
chrLK031792:-:2360925..2362557
Molecular Weight (calculated)
43750.4 Da
IEP (calculated)
6.913
GRAVY (calculated)
-0.680
Length
388 amino acids
Sequence
(BLAST)
(BLAST)
001: MFEIQDSGSW RDQKDNDRNC FSVMMRPTTE QGLSLGLSSQ TETMRGNNNE YATQVVSGFT RTIHNSKYLN AAQELLDEAI NGKKALKQFQ PEGETINEEK
101: EYKLEESNRN PDIPQGERQE LQRKLTKLLS ILDEVDKRYK QYYHQMQIVV SSFDVIAGCG AAKPYTALAL QTISRHFRCV RDAISVQILV IRKSLGGEHD
201: GLDRKSLCLN SYVFENSELS YPKDSDKIML ARQTGLSRGQ VSNWFINARV RLWKPMVEEI YKEEFTDALK ESGPNLSSRN TPATTEIQEQ HQMESSSNNV
301: VASSSMGQNS VAHAGDRFMM VTEMTRHGSG GMSLTLGIKN SDAHSDVSMS GVINNKKNTI PANDFQYLSS GNHQHRRGPS QLFHDFVA
101: EYKLEESNRN PDIPQGERQE LQRKLTKLLS ILDEVDKRYK QYYHQMQIVV SSFDVIAGCG AAKPYTALAL QTISRHFRCV RDAISVQILV IRKSLGGEHD
201: GLDRKSLCLN SYVFENSELS YPKDSDKIML ARQTGLSRGQ VSNWFINARV RLWKPMVEEI YKEEFTDALK ESGPNLSSRN TPATTEIQEQ HQMESSSNNV
301: VASSSMGQNS VAHAGDRFMM VTEMTRHGSG GMSLTLGIKN SDAHSDVSMS GVINNKKNTI PANDFQYLSS GNHQHRRGPS QLFHDFVA
001: MATYYKTGSS EIYSRPEFVP GNAMNYTNSF TETFPRDSTN NVSPSKEIQV LSSLGGVSQM VEIQDSGSWR DQEDNDRNRF PVMRRLGLSS QIETSRGNNN
101: NEYATQVVSG FTRTIHNSKY LKAAQELLDE TVNVKKALKQ FQPEGDKINE VKEKNLQTNT AEIPQAERQE LQSKLSKLLS ILDEVDRNYK QYYHQMQIVV
201: SSFDVIAGCG AAKPYTALAL QTISRHFRCL RDAISGQILV IRKSLGGEQD GSDGRGVGIS RLRNVDQQVR QQRALQRLGV MQPHTWRPQR GLPDSSVLVL
301: RAWLFEHFLH PYPKDSDKIM LARQTGLSRG QVSNWFINAR VRLWKPMVEE MYKEEFTDAL QENDPNQSSE NTPEITEIQE LQTESSSNNG HVPGVASSSM
401: RQNTVAHGGD RFMMVTDMTR NGNGGMSLTL GIQNSDARGD VPMSGGIDNY KNTISGTDLQ YLNSRNHQHQ IGSSQLLHDF VA
101: NEYATQVVSG FTRTIHNSKY LKAAQELLDE TVNVKKALKQ FQPEGDKINE VKEKNLQTNT AEIPQAERQE LQSKLSKLLS ILDEVDRNYK QYYHQMQIVV
201: SSFDVIAGCG AAKPYTALAL QTISRHFRCL RDAISGQILV IRKSLGGEQD GSDGRGVGIS RLRNVDQQVR QQRALQRLGV MQPHTWRPQR GLPDSSVLVL
301: RAWLFEHFLH PYPKDSDKIM LARQTGLSRG QVSNWFINAR VRLWKPMVEE MYKEEFTDAL QENDPNQSSE NTPEITEIQE LQTESSSNNG HVPGVASSSM
401: RQNTVAHGGD RFMMVTDMTR NGNGGMSLTL GIQNSDARGD VPMSGGIDNY KNTISGTDLQ YLNSRNHQHQ IGSSQLLHDF VA
Arabidopsis Description
BLH7BEL1-like homeodomain protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIW1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.