Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G022600.1 | Wheat | nucleus | 97.96 | 97.96 |
| TraesCS4B01G025500.1 | Wheat | nucleus | 97.49 | 97.34 |
| HORVU4Hr1G003800.7 | Barley | nucleus | 94.51 | 93.63 |
| EER91079 | Sorghum | nucleus | 78.21 | 76.89 |
| Zm00001d013547_P002 | Maize | nucleus | 75.08 | 74.96 |
| Zm00001d033378_P003 | Maize | nucleus | 76.02 | 74.5 |
| Os03t0680800-02 | Rice | nucleus | 78.37 | 74.07 |
| TraesCS5A01G007800.1 | Wheat | nucleus | 72.88 | 71.54 |
| GSMUA_Achr1P23300_001 | Banana | extracellular | 37.15 | 54.86 |
| GSMUA_Achr9P21580_001 | Banana | nucleus | 43.1 | 50.37 |
| GSMUA_Achr4P13590_001 | Banana | nucleus | 43.42 | 48.68 |
| GSMUA_Achr3P29230_001 | Banana | nucleus | 34.33 | 48.45 |
| CDY02261 | Canola | nucleus | 33.39 | 47.44 |
| Bra013075.1-P | Field mustard | nucleus | 31.5 | 47.18 |
| Bra013076.1-P | Field mustard | nucleus | 33.23 | 47.11 |
| CDX89711 | Canola | nucleus | 33.54 | 47.03 |
| AT2G16400.1 | Thale cress | nucleus | 34.48 | 45.64 |
| CDY46209 | Canola | nucleus | 26.8 | 45.24 |
| GSMUA_Achr4P06630_001 | Banana | nucleus | 39.66 | 44.7 |
| Bra017666.1-P | Field mustard | nucleus | 36.68 | 44.32 |
| VIT_03s0038g00050.t01 | Wine grape | nucleus | 47.81 | 44.14 |
| AT4G34610.3 | Thale cress | nucleus | 36.21 | 43.42 |
| Bra001976.1-P | Field mustard | nucleus | 29.47 | 42.34 |
| TraesCS4A01G022700.1 | Wheat | nucleus | 36.99 | 39.93 |
| CDX71279 | Canola | nucleus | 22.73 | 37.37 |
| TraesCS4A01G200800.1 | Wheat | nucleus | 32.6 | 31.33 |
| CDY45321 | Canola | nucleus, plastid | 33.07 | 30.8 |
| TraesCS7A01G022600.1 | Wheat | nucleus | 22.88 | 30.23 |
| TraesCS4A01G469900.1 | Wheat | nucleus | 23.35 | 30.04 |
| TraesCS4A01G289500.1 | Wheat | nucleus | 17.08 | 29.3 |
| GSMUA_Achr2P06420_001 | Banana | nucleus | 16.61 | 28.73 |
| TraesCS1A01G183400.1 | Wheat | nucleus | 24.92 | 27.13 |
| TraesCS5A01G514700.1 | Wheat | nucleus | 25.39 | 26.78 |
| TraesCS4A01G252100.2 | Wheat | nucleus | 31.03 | 25.68 |
| TraesCS1A01G281100.1 | Wheat | nucleus | 21.79 | 24.22 |
| TraesCS3A01G363900.1 | Wheat | nucleus | 21.63 | 21.97 |
| TraesCS7A01G358300.1 | Wheat | nucleus | 16.61 | 19.17 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.5 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF05920 |
| PFAM:PF07526 | InterPro:POX_dom | PFscan:PS50071 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF191 | SMART:SM00389 |
| SMART:SM00574 | SUPFAM:SSF46689 | EnsemblPlantsGene:TraesCS4A01G289400 | EnsemblPlants:TraesCS4A01G289400.1 | TIGR:cd00086 | SEG:seg |
Description
No Description!
Coordinates
chr4A:+:593915422..593918768
Molecular Weight (calculated)
70463.9 Da
IEP (calculated)
5.075
GRAVY (calculated)
-0.709
Length
638 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNYYSSPGD ERDPQTMYSP DTGNASYPVP SALGNLLYSN NASSGPYTEF SGIIQPQQNF MELHGHPSEH SSSREPPNMV TSLTEQSSFA PVKDMRNEML
101: MHFMDGAQSG GGGGDLIHND AHSSAQLDFG LLNNPSSASV PSAPGQGLSL SLNTHILAPS YPYWSPKPDL LTTQSYQGDE NGMKNMQSEA SRAIRNSKYL
201: KAAQELLDEI VSVWKSIKQN AQKEKAEAGK MDGKDADEVL KSEGVSSNPQ ESTANAEAEI SAAEKQELQN KMAKLLAMLD EVDRKYKHYF HQMQIVVSSF
301: DMIAGSGAAK PYTAVALQTI SRHFRCLKDA INDQVNVIRK KLGEEDSSSG REGKLTRLRY IDQQLRQQRA FQQYGMLQQN AWRPQRGLPE NSVSILRAWL
401: FEHFLHPYPK DSEKLMLARQ TGLTRSQISN WFINARVRLW KPMIEDMYKE ETGEAELDSN SSSDNLPRSK DKMASCEDKE DLKCSMSQGQ AYQTSEFKAN
501: MEMAGLTGAP SSFHNEANSD DGFMNLLLKD QRPGEADGSL LHGDESARFM AYHLAELGGY QNSNVSLTLG LQHTENSLSA PNAHRPGFTA AGEEDIYNTT
601: AANPGGGAAV ASSDYESTNQ LDQRQQFEPS PLLHDFVA
101: MHFMDGAQSG GGGGDLIHND AHSSAQLDFG LLNNPSSASV PSAPGQGLSL SLNTHILAPS YPYWSPKPDL LTTQSYQGDE NGMKNMQSEA SRAIRNSKYL
201: KAAQELLDEI VSVWKSIKQN AQKEKAEAGK MDGKDADEVL KSEGVSSNPQ ESTANAEAEI SAAEKQELQN KMAKLLAMLD EVDRKYKHYF HQMQIVVSSF
301: DMIAGSGAAK PYTAVALQTI SRHFRCLKDA INDQVNVIRK KLGEEDSSSG REGKLTRLRY IDQQLRQQRA FQQYGMLQQN AWRPQRGLPE NSVSILRAWL
401: FEHFLHPYPK DSEKLMLARQ TGLTRSQISN WFINARVRLW KPMIEDMYKE ETGEAELDSN SSSDNLPRSK DKMASCEDKE DLKCSMSQGQ AYQTSEFKAN
501: MEMAGLTGAP SSFHNEANSD DGFMNLLLKD QRPGEADGSL LHGDESARFM AYHLAELGGY QNSNVSLTLG LQHTENSLSA PNAHRPGFTA AGEEDIYNTT
601: AANPGGGAAV ASSDYESTNQ LDQRQQFEPS PLLHDFVA
001: MENYPETQFI PGDSMIQNAI VSYSEESAGR ERRTEANNVS ASQERQALSR FGGVPQMQNI GQDFGSWRDQ ASDRNGFQLM SAMAGATGIL QTGQGLSLSL
101: GSQILPGIHQ ISHQNMAPRG NEYATQSFPG GNQNLDVVRT IPNSKYLKAA QQLLDEAVNV KKALKQFQAE GDKNNENPQE PNQSTQDSST NPPADISQSE
201: RQEMQSKLTK LLSMLDEVDR RYKQYYQQMQ IVVSSFDVIA GYGAAKPYTA LALQTISRHF RSLRDAISGQ ILVLRKCLGE QQDGSDGKRV GIISRLKYVD
301: QHLRQQRGFM QPQAWRPQRG LPENSVLILR AWLFEHFLHP YPKDSDKIML ARQTGLSRGQ VSNWFINARV RLWKPMVEEI YKEEFTENDS NSSSENTPKM
401: SEIGPVAADD EDRAREFSQD QTKPDHGHGY GEETRGMVQG SHMDGRRFMA VEPTYHVADT SRLGRGDVSL TLGLQNSQGQ DNVVAMSSEA YNNFSGVDIY
501: ENAIPGDEME YVNPGSRQNR INSSQLVHDF VA
101: GSQILPGIHQ ISHQNMAPRG NEYATQSFPG GNQNLDVVRT IPNSKYLKAA QQLLDEAVNV KKALKQFQAE GDKNNENPQE PNQSTQDSST NPPADISQSE
201: RQEMQSKLTK LLSMLDEVDR RYKQYYQQMQ IVVSSFDVIA GYGAAKPYTA LALQTISRHF RSLRDAISGQ ILVLRKCLGE QQDGSDGKRV GIISRLKYVD
301: QHLRQQRGFM QPQAWRPQRG LPENSVLILR AWLFEHFLHP YPKDSDKIML ARQTGLSRGQ VSNWFINARV RLWKPMVEEI YKEEFTENDS NSSSENTPKM
401: SEIGPVAADD EDRAREFSQD QTKPDHGHGY GEETRGMVQG SHMDGRRFMA VEPTYHVADT SRLGRGDVSL TLGLQNSQGQ DNVVAMSSEA YNNFSGVDIY
501: ENAIPGDEME YVNPGSRQNR INSSQLVHDF VA
Arabidopsis Description
BLH6BEL1-like homeodomain protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O65685]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.