Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G191800.1 | Wheat | nucleus | 96.76 | 96.92 |
| TraesCS1D01G193800.1 | Wheat | nucleus | 96.42 | 95.93 |
| HORVU1Hr1G049760.1 | Barley | nucleus | 93.86 | 92.28 |
| Os10t0534900-01 | Rice | nucleus | 62.12 | 62.12 |
| EER92018 | Sorghum | nucleus | 60.58 | 55.99 |
| TraesCS5A01G514700.1 | Wheat | nucleus | 55.8 | 54.05 |
| Zm00001d029736_P001 | Maize | nucleus, plastid | 61.09 | 52.03 |
| CDY45383 | Canola | nucleus | 21.5 | 47.91 |
| GSMUA_Achr1P06400_001 | Banana | nucleus | 35.67 | 40.5 |
| TraesCS7A01G022600.1 | Wheat | nucleus | 32.42 | 39.34 |
| GSMUA_Achr2P04310_001 | Banana | nucleus | 37.2 | 39.07 |
| TraesCS4A01G469900.1 | Wheat | nucleus | 32.76 | 38.71 |
| VIT_02s0025g00200.t01 | Wine grape | nucleus | 40.96 | 37.15 |
| PGSC0003DMT400032122 | Potato | nucleus | 39.59 | 36.65 |
| KRH77572 | Soybean | nucleus | 39.59 | 35.91 |
| KRH27902 | Soybean | nucleus | 39.25 | 35.83 |
| Solyc08g081400.2.1 | Tomato | nucleus | 39.08 | 35.56 |
| KRH41225 | Soybean | nucleus | 39.08 | 35.45 |
| KRH59951 | Soybean | nucleus | 38.4 | 35.43 |
| CDY44476 | Canola | nucleus | 33.62 | 34.68 |
| Bra025497.1-P | Field mustard | nucleus | 34.3 | 33.9 |
| AT5G41410.1 | Thale cress | nucleus | 34.3 | 32.9 |
| TraesCS1A01G281100.1 | Wheat | nucleus | 26.62 | 27.18 |
| TraesCS4A01G022700.1 | Wheat | nucleus | 26.96 | 26.73 |
| TraesCS4A01G289500.1 | Wheat | nucleus | 16.38 | 25.81 |
| TraesCS4A01G200800.1 | Wheat | nucleus | 28.67 | 25.3 |
| TraesCS4A01G289400.1 | Wheat | nucleus | 27.13 | 24.92 |
| TraesCS3A01G363900.1 | Wheat | nucleus | 26.62 | 24.84 |
| TraesCS5A01G007800.1 | Wheat | nucleus | 26.79 | 24.15 |
| TraesCS4A01G252100.2 | Wheat | nucleus | 31.74 | 24.12 |
| TraesCS7A01G358300.1 | Wheat | nucleus | 17.24 | 18.26 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF05920 | PFAM:PF07526 |
| InterPro:POX_dom | PFscan:PS50071 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF96 | SMART:SM00389 | SMART:SM00574 |
| SUPFAM:SSF46689 | EnsemblPlantsGene:TraesCS1A01G183400 | EnsemblPlants:TraesCS1A01G183400.1 | TIGR:cd00086 | SEG:seg | : |
Description
No Description!
Coordinates
chr1A:-:333135045..333139201
Molecular Weight (calculated)
62897.4 Da
IEP (calculated)
7.129
GRAVY (calculated)
-0.544
Length
586 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHDPSLVGY ADYFAETGSN GGGVTLVPEV DTRAEHQMYG GGLHHHHHSG VNMFGARGFG MAPPGEATSA QSKAALDFDV DGSSTISFFR GEQHHHQHQQ
101: LQMGQAPLSL SLHGPPDAGS SSFMLHHQLG GGEPRLQQHQ QTAPGAWQVQ GAGSGWQLRG SRFLLPTQQL LQGFCSIPAD TDNKAPKKPA QEEHGSSSSA
201: SWPPSSTQIQ SMDAAELQRL KAKLYTMIEE VDRRYRRYRD QMRAVAASFE AVAGQRAAAV YTRMASRTIS RHFRSVRDGV AAQVRAVRGA LGEKDAGAAV
301: PGMTKGETPR LRALDQCLRQ HKAYQSGMLE SHPWRPQRGL PERAVSVLRA WLFEHFLHPY PSDVDKHILA RQTGLSRSQV SNWFINARVR LWKPMVEEMY
401: AEEMKDKEEG SGGDGGGQSA QQAGDLANHN PADGSYASEG RGEQKPTRAQ LHQLHDAGSL ASVVSIGQST DPQGLNFGMM DQLDFDAYEA ATAGFGNGVS
501: LTLGLQHQQQ QQQHHGGVNV AAFAAASPSS SSAAHGGAAE FLFMAGEGVH PSANGQFGAG MGSGADVASQ YHRGLGGFHL LRDLAG
101: LQMGQAPLSL SLHGPPDAGS SSFMLHHQLG GGEPRLQQHQ QTAPGAWQVQ GAGSGWQLRG SRFLLPTQQL LQGFCSIPAD TDNKAPKKPA QEEHGSSSSA
201: SWPPSSTQIQ SMDAAELQRL KAKLYTMIEE VDRRYRRYRD QMRAVAASFE AVAGQRAAAV YTRMASRTIS RHFRSVRDGV AAQVRAVRGA LGEKDAGAAV
301: PGMTKGETPR LRALDQCLRQ HKAYQSGMLE SHPWRPQRGL PERAVSVLRA WLFEHFLHPY PSDVDKHILA RQTGLSRSQV SNWFINARVR LWKPMVEEMY
401: AEEMKDKEEG SGGDGGGQSA QQAGDLANHN PADGSYASEG RGEQKPTRAQ LHQLHDAGSL ASVVSIGQST DPQGLNFGMM DQLDFDAYEA ATAGFGNGVS
501: LTLGLQHQQQ QQQHHGGVNV AAFAAASPSS SSAAHGGAAE FLFMAGEGVH PSANGQFGAG MGSGADVASQ YHRGLGGFHL LRDLAG
001: MGLATTTSSM SQDYHHHQGI FSFSNGFHRS SSTTHQEEVD ESAVVSGAQI PVYETAGMLS EMFAYPGGGG GGSGGEILDQ STKQLLEQQN RHNNNNNSTL
101: HMLLPNHHQG FAFTDENTMQ PQQQQHFTWP SSSSDHHQNR DMIGTVHVEG GKGLSLSLSS SLAAAKAEEY RSIYCAAVDG TSSSSNASAH HHQFNQFKNL
201: LLENSSSQHH HHQVVGHFGS SSSSPMAASS SIGGIYTLRN SKYTKPAQEL LEEFCSVGRG HFKKNKLSRN NSNPNTTGGG GGGGSSSSAG TANDSPPLSP
301: ADRIEHQRRK VKLLSMLEEV DRRYNHYCEQ MQMVVNSFDQ VMGYGAAVPY TTLAQKAMSR HFRCLKDAVA VQLKRSCELL GDKEAAGAAS SGLTKGETPR
401: LRLLEQSLRQ QRAFHHMGMM EQEAWRPQRG LPERSVNILR AWLFEHFLNP YPSDADKHLL ARQTGLSRNQ VSNWFINARV RLWKPMVEEM YQQEAKEREE
501: AEEENENQQQ QRRQQQTNNN DTKPNNNENN FTVITAQTPT TMTSTHHEND SSFLSSVAAA SHGGSDAFTV ATCQQDVSDF HVDGDGVNVI RFGTKQTGDV
601: SLTLGLRHSG NIPDKNTSFS VRDFGDF
101: HMLLPNHHQG FAFTDENTMQ PQQQQHFTWP SSSSDHHQNR DMIGTVHVEG GKGLSLSLSS SLAAAKAEEY RSIYCAAVDG TSSSSNASAH HHQFNQFKNL
201: LLENSSSQHH HHQVVGHFGS SSSSPMAASS SIGGIYTLRN SKYTKPAQEL LEEFCSVGRG HFKKNKLSRN NSNPNTTGGG GGGGSSSSAG TANDSPPLSP
301: ADRIEHQRRK VKLLSMLEEV DRRYNHYCEQ MQMVVNSFDQ VMGYGAAVPY TTLAQKAMSR HFRCLKDAVA VQLKRSCELL GDKEAAGAAS SGLTKGETPR
401: LRLLEQSLRQ QRAFHHMGMM EQEAWRPQRG LPERSVNILR AWLFEHFLNP YPSDADKHLL ARQTGLSRNQ VSNWFINARV RLWKPMVEEM YQQEAKEREE
501: AEEENENQQQ QRRQQQTNNN DTKPNNNENN FTVITAQTPT TMTSTHHEND SSFLSSVAAA SHGGSDAFTV ATCQQDVSDF HVDGDGVNVI RFGTKQTGDV
601: SLTLGLRHSG NIPDKNTSFS VRDFGDF
Arabidopsis Description
BLH4BEL1-like homeodomain 4 [Source:TAIR;Acc:AT2G23760]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.