Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G280300.1 | Wheat | nucleus | 97.91 | 98.08 |
| TraesCS1B01G290200.1 | Wheat | nucleus | 96.69 | 95.69 |
| EES18336 | Sorghum | nucleus | 77.7 | 78.25 |
| Os05t0455200-01 | Rice | nucleus | 78.75 | 77.93 |
| Zm00001d038355_P001 | Maize | nucleus | 75.96 | 75.69 |
| Zm00001d010060_P001 | Maize | nucleus | 71.08 | 71.2 |
| HORVU1Hr1G072850.1 | Barley | nucleus, plastid | 93.73 | 67.76 |
| GSMUA_Achr10P... | Banana | nucleus | 11.32 | 63.73 |
| TraesCS3A01G363900.1 | Wheat | nucleus | 65.16 | 59.55 |
| GSMUA_Achr7P14960_001 | Banana | nucleus | 41.99 | 54.77 |
| Solyc10g086640.1.1 | Tomato | nucleus | 22.47 | 50.0 |
| GSMUA_Achr10P... | Banana | plastid | 8.01 | 47.42 |
| GSMUA_Achr5P07020_001 | Banana | nucleus | 41.46 | 45.33 |
| PGSC0003DMT400062353 | Potato | nucleus | 37.11 | 42.18 |
| Solyc09g011380.2.1 | Tomato | nucleus | 36.41 | 41.47 |
| KRH00065 | Soybean | nucleus | 37.98 | 38.05 |
| KRH75724 | Soybean | nucleus | 39.9 | 37.6 |
| CDY10473 | Canola | nucleus | 37.46 | 37.39 |
| VIT_08s0007g01290.t01 | Wine grape | nucleus | 41.81 | 37.38 |
| CDY48107 | Canola | nucleus | 37.11 | 37.04 |
| AT5G02030.1 | Thale cress | nucleus | 37.11 | 37.04 |
| KRH65931 | Soybean | nucleus | 39.72 | 36.95 |
| CDY40327 | Canola | nucleus | 37.11 | 36.85 |
| Bra005703.1-P | Field mustard | nucleus | 36.59 | 36.84 |
| CDY69132 | Canola | nucleus | 36.76 | 36.76 |
| Bra028883.1-P | Field mustard | nucleus | 37.28 | 36.64 |
| Bra009618.1-P | Field mustard | nucleus | 37.28 | 36.52 |
| PGSC0003DMT400049235 | Potato | nucleus | 35.71 | 35.65 |
| CDY55113 | Canola | nucleus | 31.88 | 34.99 |
| CDX80798 | Canola | nucleus | 31.36 | 33.83 |
| VIT_13s0019g02450.t01 | Wine grape | nucleus | 27.53 | 31.73 |
| TraesCS7A01G022600.1 | Wheat | nucleus | 23.87 | 28.36 |
| TraesCS4A01G469900.1 | Wheat | nucleus | 23.87 | 27.62 |
| TraesCS1A01G183400.1 | Wheat | nucleus | 27.18 | 26.62 |
| TraesCS5A01G514700.1 | Wheat | nucleus | 25.78 | 24.46 |
| TraesCS4A01G289500.1 | Wheat | nucleus | 15.85 | 24.46 |
| TraesCS4A01G022700.1 | Wheat | nucleus | 24.04 | 23.35 |
| TraesCS4A01G200800.1 | Wheat | nucleus | 26.66 | 23.04 |
| TraesCS4A01G252100.2 | Wheat | nucleus | 30.14 | 22.44 |
| TraesCS4A01G289400.1 | Wheat | nucleus | 24.22 | 21.79 |
| TraesCS5A01G007800.1 | Wheat | nucleus | 23.34 | 20.62 |
| TraesCS7A01G358300.1 | Wheat | nucleus | 16.38 | 17.0 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF05920 | PFAM:PF07526 |
| InterPro:POX_dom | PFscan:PS50071 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF91 | SMART:SM00389 | SMART:SM00574 |
| SUPFAM:SSF46689 | EnsemblPlantsGene:TraesCS1A01G281100 | EnsemblPlants:TraesCS1A01G281100.1 | TIGR:cd00086 | SEG:seg | : |
Description
No Description!
Coordinates
chr1A:+:479541077..479545036
Molecular Weight (calculated)
62052.5 Da
IEP (calculated)
8.491
GRAVY (calculated)
-0.590
Length
574 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSAAGGYGG GAEHQHQHQQ HHQHQLLLGQ AAAGQLYHVP QHSRREKLRF PPDPADSSSP TPGAWPPPTV PFYSYASSSS SYSPHSPTLA HAHNQLLVHG
101: MPAGAQIPSQ NFALSLSSSS SNPPPQQRRH LAGATGPYGP FTGYAAVLGR SRFLGPAQKL LEEICDVGGR PSQLDRCSDD GLLDLDAMDA AGDVGHEMDS
201: SDRAAAEGVT VSGAEQQWRK TRLTLMEEVC KRYRQYYQQL QAVISSFETV AGLSNAAPFA SIALRTMSKH FKYLKSTIQS QLRNTSKVAA GKDSLGKEDM
301: ANFGIMGGGA ALMRGSNANT FSQPHNIWRP QRGLPERAVS VLRAWLFEHF LHPYPTDSDK QMLAKQTGLT RNQVSNWFIN ARVRLWKPMV EEIHNLEMRQ
401: GHKSSAADKN QLGAQQQTQQ HSPDSSGRPS DPSNSQQGQS SSMSQGRGAH HHNASRHIQS ELSPMTHDMA GQVSFAYNGG GMAAHHHGSM ALSHPQHVEG
501: GAGSSGGVSL TLGLHQNNRA YIAEPLPAAL PLNLAHRFGL EDVSDAYAMA ASFGGQDRHF TKEMGGHLLH DFVG
101: MPAGAQIPSQ NFALSLSSSS SNPPPQQRRH LAGATGPYGP FTGYAAVLGR SRFLGPAQKL LEEICDVGGR PSQLDRCSDD GLLDLDAMDA AGDVGHEMDS
201: SDRAAAEGVT VSGAEQQWRK TRLTLMEEVC KRYRQYYQQL QAVISSFETV AGLSNAAPFA SIALRTMSKH FKYLKSTIQS QLRNTSKVAA GKDSLGKEDM
301: ANFGIMGGGA ALMRGSNANT FSQPHNIWRP QRGLPERAVS VLRAWLFEHF LHPYPTDSDK QMLAKQTGLT RNQVSNWFIN ARVRLWKPMV EEIHNLEMRQ
401: GHKSSAADKN QLGAQQQTQQ HSPDSSGRPS DPSNSQQGQS SSMSQGRGAH HHNASRHIQS ELSPMTHDMA GQVSFAYNGG GMAAHHHGSM ALSHPQHVEG
501: GAGSSGGVSL TLGLHQNNRA YIAEPLPAAL PLNLAHRFGL EDVSDAYAMA ASFGGQDRHF TKEMGGHLLH DFVG
001: MADAYEPYHV LQQSRRDKLR IPSLDSHFHF HPPPPPSSGG GGGVFPLADS DFLAAGGFHS NNNNNHISNP SYSNFMGFLG GPSSSSSTAV AVAGDHSFNA
101: GLSSGDVLVF KPEPLSLSLS SHPRLAYDLV VPGVVNSGFC RSAGEANAAA VTIASRSSGP LGPFTGYASI LKGSRFLKPA QMLLDEFCNV GRGIYTDKVI
201: DDDDSSLLFD PTVENLCGVS DGGGGDNGKK KSKLISMLDE VYKRYKQYYE QLQAVMGSFE CVAGLGHAAP YANLALKALS KHFKCLKNAI TDQLQFSHNN
301: KIQQQQQCGH PMNSENKTDS LRFGGSDSSR GLCSAGQRHG FPDHHAPVWR PHRGLPERAV TVLRAWLFDH FLHPYPTDTD KLMLAKQTGL SRNQVSNWFI
401: NARVRVWKPM VEEIHMLETR QSQRSSSSSW RDERTSTTVF PDNSNNNPSS SSAQQRPNNS SPPRRARNDD VHGTNNNNSY VNSGSGGGSA VGFSYGIGSS
501: NVPVMNSSTN GGVSLTLGLH HQIGLPEPFP MTTAQRFGLD GGSGDGGGGY EGQNRQFGRD FIGGSNHQFL HDFVG
101: GLSSGDVLVF KPEPLSLSLS SHPRLAYDLV VPGVVNSGFC RSAGEANAAA VTIASRSSGP LGPFTGYASI LKGSRFLKPA QMLLDEFCNV GRGIYTDKVI
201: DDDDSSLLFD PTVENLCGVS DGGGGDNGKK KSKLISMLDE VYKRYKQYYE QLQAVMGSFE CVAGLGHAAP YANLALKALS KHFKCLKNAI TDQLQFSHNN
301: KIQQQQQCGH PMNSENKTDS LRFGGSDSSR GLCSAGQRHG FPDHHAPVWR PHRGLPERAV TVLRAWLFDH FLHPYPTDTD KLMLAKQTGL SRNQVSNWFI
401: NARVRVWKPM VEEIHMLETR QSQRSSSSSW RDERTSTTVF PDNSNNNPSS SSAQQRPNNS SPPRRARNDD VHGTNNNNSY VNSGSGGGSA VGFSYGIGSS
501: NVPVMNSSTN GGVSLTLGLH HQIGLPEPFP MTTAQRFGLD GGSGDGGGGY EGQNRQFGRD FIGGSNHQFL HDFVG
Arabidopsis Description
BLH9BEL1-like homeodomain protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZM8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.