Factsheet for PGSC0003DMT400049235

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400012712
PGSC0003DMT400040351
PGSC0003DMT400043083
PGSC0003DMT400049235
PGSC0003DMT400062353

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G02030.1	PGSC0003DMT400043083	AT1G62360.1	12897247
AT5G02030.1	PGSC0003DMT400043083	AT1G62360.1	15019989
AT5G02030.1	PGSC0003DMT400043083	AT1G62360.1	15781858
AT5G02030.1	PGSC0003DMT400043083	AT1G62360.1	16513846
AT5G02030.1	PGSC0003DMT400012712	AT4G08150.1	12897247
AT5G02030.1	PGSC0003DMT400012712	AT4G08150.1	15019989
AT5G02030.1	PGSC0003DMT400012712	AT4G08150.1	15781858
AT5G02030.1	PGSC0003DMT400049235	AT5G02030.1	15781858
AT5G02030.1	PGSC0003DMT400062353	AT5G02030.1	15781858
AT5G02030.1	PGSC0003DMT400040351	AT5G25220.1	15781858

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g086640.1.1	Tomato	nucleus	36.17	80.62
PGSC0003DMT400062353	Potato	nucleus	52.0	59.21
GSMUA_Achr10P...	Banana	nucleus	9.39	52.94
VIT_08s0007g01290.t01	Wine grape	nucleus	52.87	47.35
HORVU3Hr1G072010.1	Barley	mitochondrion	10.26	46.09
KRH75724	Soybean	nucleus	48.17	45.48
KRH65931	Soybean	nucleus	47.83	44.57
KRH00065	Soybean	nucleus	43.83	43.98
Bra005703.1-P	Field mustard	nucleus	42.26	42.63
AT5G02030.1	Thale cress	nucleus	42.61	42.61
CDY40327	Canola	nucleus	41.91	41.7
Bra009618.1-P	Field mustard	nucleus	42.43	41.64
CDY10473	Canola	nucleus	41.22	41.22
Bra028883.1-P	Field mustard	nucleus	41.39	40.75
GSMUA_Achr7P14960_001	Banana	nucleus	31.13	40.68
CDY69132	Canola	nucleus	40.52	40.59
CDY55113	Canola	nucleus	36.87	40.54
CDY48107	Canola	nucleus	40.52	40.52
CDX80798	Canola	nucleus	37.04	40.04
GSMUA_Achr10P...	Banana	plastid	6.43	38.14
EES18336	Sorghum	nucleus	36.0	36.32
Os05t0455200-01	Rice	nucleus	36.52	36.21
Zm00001d038355_P001	Maize	nucleus	36.0	35.94
TraesCS1D01G280300.1	Wheat	nucleus	35.65	35.78
TraesCS1A01G281100.1	Wheat	nucleus	35.65	35.71
TraesCS1B01G290200.1	Wheat	nucleus	35.83	35.52
Zm00001d042864_P002	Maize	nucleus	35.13	34.41
GSMUA_Achr5P07020_001	Banana	nucleus	31.3	34.29
Os01t0848400-01	Rice	nucleus	36.35	34.15
EES03882	Sorghum	nucleus	34.96	33.9
Zm00001d010060_P001	Maize	nucleus	33.57	33.68
TraesCS3D01G357400.1	Wheat	nucleus	35.65	32.91
TraesCS3B01G396100.1	Wheat	nucleus	35.48	32.9
TraesCS3A01G363900.1	Wheat	nucleus	35.65	32.64
PGSC0003DMT400056612	Potato	nucleus	16.52	32.2
PGSC0003DMT400009609	Potato	nucleus	19.48	26.48
HORVU1Hr1G072850.1	Barley	nucleus, plastid	36.17	26.2
PGSC0003DMT400032122	Potato	nucleus	27.13	24.64
PGSC0003DMT400020825	Potato	nucleus	28.52	23.7
PGSC0003DMT400026172	Potato	nucleus	29.22	22.76
HORVU3Hr1G085720.1	Barley	nucleus, plastid	29.74	22.71
PGSC0003DMT400050527	Potato	nucleus	27.48	22.38
PGSC0003DMT400015183	Potato	nucleus	26.09	21.93
PGSC0003DMT400079517	Potato	nucleus	24.35	21.71
PGSC0003DMT400009610	Potato	nucleus	24.87	21.63
PGSC0003DMT400054945	Potato	nucleus	25.91	21.16
PGSC0003DMT400076995	Potato	nucleus	15.65	16.67

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:102594888	MapMan:15.5.3.5	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf
InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356	UniProt:M1BNG6	PFAM:PF05920	PFAM:PF07526
EnsemblPlantsGene:PGSC0003DMG400019142	PGSC:PGSC0003DMG400019142	EnsemblPlants:PGSC0003DMT400049235	InterPro:POX_dom	PFscan:PS50071	PANTHER:PTHR11850
PANTHER:PTHR11850:SF82	SMART:SM00389	SMART:SM00574	SUPFAM:SSF46689	UniParc:UPI000296EA10	RefSeq:XP_006349489.1
SEG:seg	:	:	:	:	:

Description

Bel1 homeotic protein [Source:PGSC_GENE;Acc:PGSC0003DMG400019142]

Coordinates

chr10:+:50777722..50782314

Molecular Weight (calculated)

64045.1 Da

IEP (calculated)

7.379

GRAVY (calculated)

-0.694

Length

575 amino acids

Sequence
(BLAST)

001: MAAEGFEAYH VPQQSRRDKL RGDTNTNTNT NFLPNFYNNN PSYLLNPCDN FLLIKSMDPQ ISSSFHQINN NPFLYNTNQN HDIDVVSSST YHNNNSKNSI
101: TTYVTPGQGL SLSLSSHNHH QRNSTTTSNN STVPLELNLQ RYDSSLFTTV QAAATAADCC NNEFLSSKSG GSTTVGPFTG YASILKGSRF LKPAQQLLED
201: ICGIYAQKLL EDDDSLGIMD DSSIDASNDD GSEHRRNNSK LISMLDEVYR RYKQYYQQLQ GVVASFESVP GLGNAAPFAN LSLKALSKHF RCLKNAICDQ
301: MNYTIKSQTH SHNSQINCDD STSTRSVGKG NFNYNNFQRT GFVEHHQPVW RPQRGLPERA VTVLRAWLFD HFLHPYPTDS DKVMLAKQTG LSRNQVSNWF
401: INARVRLWKP MVEEIHMLET RQANKSSSQR MQGLNNNNNN NIPIEVHFPT SNNSLPSTSS AQQVPSKRTR NNSPEDEMNL SYSRVGIDQV MSASSGGNGG
501: GVSLTLGLHH QNNNIGIGGL SSESFPRNAA RRFGIDANND GFMFGDGFEP QNHQIGRDHN NNNIIGGQLL HDFVG

Best Arabidopsis Sequence Match ( AT5G02030.1 )
(BLAST)

001: MADAYEPYHV LQQSRRDKLR IPSLDSHFHF HPPPPPSSGG GGGVFPLADS DFLAAGGFHS NNNNNHISNP SYSNFMGFLG GPSSSSSTAV AVAGDHSFNA
101: GLSSGDVLVF KPEPLSLSLS SHPRLAYDLV VPGVVNSGFC RSAGEANAAA VTIASRSSGP LGPFTGYASI LKGSRFLKPA QMLLDEFCNV GRGIYTDKVI
201: DDDDSSLLFD PTVENLCGVS DGGGGDNGKK KSKLISMLDE VYKRYKQYYE QLQAVMGSFE CVAGLGHAAP YANLALKALS KHFKCLKNAI TDQLQFSHNN
301: KIQQQQQCGH PMNSENKTDS LRFGGSDSSR GLCSAGQRHG FPDHHAPVWR PHRGLPERAV TVLRAWLFDH FLHPYPTDTD KLMLAKQTGL SRNQVSNWFI
401: NARVRVWKPM VEEIHMLETR QSQRSSSSSW RDERTSTTVF PDNSNNNPSS SSAQQRPNNS SPPRRARNDD VHGTNNNNSY VNSGSGGGSA VGFSYGIGSS
501: NVPVMNSSTN GGVSLTLGLH HQIGLPEPFP MTTAQRFGLD GGSGDGGGGY EGQNRQFGRD FIGGSNHQFL HDFVG

Arabidopsis Description

BLH9BEL1-like homeodomain protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZM8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.