Factsheet for PGSC0003DMT400020825

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400001474
PGSC0003DMT400001475
PGSC0003DMT400001476
PGSC0003DMT400012712
PGSC0003DMT400069515

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G27990.1	PGSC0003DMT400001474	AT3G49580.1	21798944
AT2G27990.1	PGSC0003DMT400001475	AT3G49580.1	21798944
AT2G27990.1	PGSC0003DMT400001476	AT3G49580.1	21798944
AT2G27990.1	PGSC0003DMT400069515	AT3G49580.1	21798944
AT2G27990.1	PGSC0003DMT400012712	AT4G08150.1	15781858
AT2G27990.1	PGSC0003DMT400001474	AT5G24660.1	21798944
AT2G27990.1	PGSC0003DMT400001475	AT5G24660.1	21798944
AT2G27990.1	PGSC0003DMT400001476	AT5G24660.1	21798944
AT2G27990.1	PGSC0003DMT400069515	AT5G24660.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g069890.1.1	Tomato	golgi	72.4	86.38
GSMUA_Achr11P...	Banana	plastid	20.52	53.99
VIT_06s0004g02580.t01	Wine grape	nucleus	42.05	38.8
KRH25064	Soybean	nucleus	41.47	37.76
KRH30618	Soybean	nucleus	41.62	37.5
KRH26495	Soybean	nucleus	41.76	36.4
KRH22860	Soybean	nucleus	41.04	36.13
PGSC0003DMT400056612	Potato	nucleus	15.17	35.59
PGSC0003DMT400062353	Potato	nucleus	25.43	34.85
AT2G27990.1	Thale cress	nucleus	27.46	32.53
GSMUA_Achr10P...	Banana	nucleus	32.23	29.58
PGSC0003DMT400049235	Potato	nucleus	23.7	28.52
PGSC0003DMT400009609	Potato	nucleus	16.04	26.24
PGSC0003DMT400015183	Potato	nucleus	25.0	25.29
PGSC0003DMT400032122	Potato	nucleus	23.12	25.28
PGSC0003DMT400079517	Potato	nucleus	22.69	24.34
PGSC0003DMT400009610	Potato	nucleus	23.12	24.21
PGSC0003DMT400054945	Potato	nucleus	23.41	23.01
PGSC0003DMT400026172	Potato	nucleus	24.42	22.9
PGSC0003DMT400050527	Potato	nucleus	23.27	22.8
PGSC0003DMT400076995	Potato	nucleus	15.32	19.63

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:102580336	MapMan:15.5.3.5	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf
InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356	UniProt:M1AE49	PFAM:PF05920	PFAM:PF07526
EnsemblPlantsGene:PGSC0003DMG400008057	PGSC:PGSC0003DMG400008057	EnsemblPlants:PGSC0003DMT400020825	InterPro:POX_dom	PFscan:PS50071	PANTHER:PTHR11850
PANTHER:PTHR11850:SF125	SMART:SM00389	SMART:SM00574	SUPFAM:SSF46689	UniParc:UPI0002952B3C	RefSeq:XP_006340165.1
SEG:seg	:	:	:	:	:

Description

Bel1 homeotic protein [Source:PGSC_GENE;Acc:PGSC0003DMG400008057]

Coordinates

chr11:-:41349654..41353775

Molecular Weight (calculated)

76126.3 Da

IEP (calculated)

6.843

GRAVY (calculated)

-0.472

Length

692 amino acids

Sequence
(BLAST)

001: MSDQVSEFHV AQHSRRERLR ITNSEELEII HQPYQYGNIS YDPSVVLSSS EMINFSSTAT SSTGGLQHSS CGWNNVTNFN SSGSGVIETS NNLSPMFVGV
101: GVEGVEGGVL SASLNLNSST IDVKPYFYGG YNEMQQSVSV SDAITSNAEF SSSLLYHDTL QEVVKSATVG NQDVDTRRVG SWMENESGLM VSNYMDQSHH
201: LYDKNCGLGS NFRTNVSDNS SVQGLALSLS PVPTTNTLQM EKRNNVIVPE NFAIAHRSAV PLGPFTGYAT ILKSSKFLRP AQQLLDELCE LAAGSSNVIK
301: CSNFSKKVRD GFRVSCDGNA AAESSSGGGG GGDSSGLNES NECPEYLQKK AKLIFMQEEI CKKYKQYHQQ MQMVVSSFET VAGLSAATPY ISLALKTVSQ
401: HFKSLRNAIT DHLKNIRQAL GEDLPSPASG MSNKGDGNSS RLKFVDQTSL HKQKSGGGAG VAFLESQQHV WRPQRGLPER AVAILRAWLF DHFLHPYPTD
501: SDKHMLASQT GLTRNQVSNW FINARVRVWK PMVEEIHMLE TKGGDQTRKS DVNKLVTERT SHVSRGQHFS NVLLNMSGVV MPEKQEDCQG LIGPSERLDE
601: SSSDHHMWRN QEKRSRIECH NISAASSMDG SLMGFVPYQR NALDIGGNIG AVSLTLGLRQ NAEAAQQQQQ LQLHEHRLRQ QFGGHMIHDF VD

Best Arabidopsis Sequence Match ( AT2G27990.1 )
(BLAST)

001: MDMIKPDFQQ IRRDKFRVEQ MNDFPNTWTQ QQHQNIRIPN NLDLIGILQN QISVPVQTDL YQDSAATFMN MPQSIHRDPQ GPSNWRISDL SQPSTVNHGY
101: DQAGIRPNNV ADLLSDHFSS RNQILDRPLY VGRDSIPQSS MIRRSEVSCL DDNQKGCVTV ACSGTGNEIL RSSYDQGSSS GSYRGEFSFL PSLENQSVAH
201: NASNWNHGPV NVTATSHTNS KKGFPLSLLS DIPPSRDVGN AAVLSTMNIH GPLGPFTGYA SILKSSRFLE PAQKMLEEFC ISYASKIISR SESTSMEDDD
301: DDDDNLSGFS SSSEPLEPKN RLKKAKLLFL QEEVCKWYKL YNHQLQTVMS SFNTVAGLNT ATPYISLALK RTSRSFKALR TAIAEHVKQI SSHSSNGNNN
401: NRFQKRQRSL IGNNVGFESQ QQHIWRPQRG LPERAVAVLR AWLFDHFLHP YPTDSDKQML ATQTGLSRNQ VSNWFINARV RLWKPMVEEI HTLETKAIKN
501: ADTSHNIEPS NRPNTVSSPS HEQTLTGLSG TKRSRLEYMD MVGFNRGNVS LTLELRRGVD NVIQTQTQDH QFGTGSQMFH DFVG

Arabidopsis Description

BLH8BEL1-like homeodomain protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJJ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.