Factsheet for GSMUA_Achr10P06670_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr2P13200_001
GSMUA_Achr3P26230_001
GSMUA_Achr4P03120_001
GSMUA_Achr4P28270_001
GSMUA_Achr4P32230_001
GSMUA_Achr5P01960_001
GSMUA_Achr6P04640_001
GSMUA_Achr7P08050_001
GSMUA_Achr7P27540_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G27990.1	GSMUA_Achr10P...	AT4G08150.1	15781858
AT2G27990.1	GSMUA_Achr2P13200_001	AT4G08150.1	15781858
AT2G27990.1	GSMUA_Achr3P26230_001	AT4G08150.1	15781858
AT2G27990.1	GSMUA_Achr4P03120_001	AT4G08150.1	15781858
AT2G27990.1	GSMUA_Achr4P28270_001	AT4G08150.1	15781858
AT2G27990.1	GSMUA_Achr4P32230_001	AT4G08150.1	15781858
AT2G27990.1	GSMUA_Achr5P01960_001	AT4G08150.1	15781858
AT2G27990.1	GSMUA_Achr6P04640_001	AT4G08150.1	15781858
AT2G27990.1	GSMUA_Achr7P08050_001	AT4G08150.1	15781858
AT2G27990.1	GSMUA_Achr7P27540_001	AT4G08150.1	15781858

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	plastid	25.86	74.14
GSMUA_Achr5P03140_001	Banana	nucleus	5.04	49.35
GSMUA_Achr11P...	Banana	plastid	23.34	43.14
GSMUA_Achr10P...	Banana	nucleus	5.04	37.25
GSMUA_Achr10P...	Banana	plastid	4.77	37.11
GSMUA_Achr2P06410_001	Banana	nucleus	7.03	36.55
GSMUA_Achr4P07450_001	Banana	nucleus	14.46	35.97
Solyc11g069890.1.1	Tomato	golgi	27.59	35.86
GSMUA_Achr1P03680_001	Banana	nucleus	13.93	35.47
GSMUA_Achr5P08840_001	Banana	nucleus	14.85	35.33
GSMUA_Achr4P14670_001	Banana	nucleus	13.53	34.34
VIT_06s0004g02580.t01	Wine grape	nucleus	33.29	33.47
GSMUA_Achr7P14960_001	Banana	nucleus	18.83	32.27
PGSC0003DMT400020825	Potato	nucleus	29.58	32.23
GSMUA_Achr1P26900_001	Banana	nucleus	16.58	31.41
KRH25064	Soybean	nucleus	31.17	30.92
KRH22860	Soybean	nucleus	31.83	30.53
GSMUA_Achr10P...	Banana	nucleus	16.84	30.38
GSMUA_Achr4P04480_001	Banana	nucleus	16.84	30.17
KRH26495	Soybean	nucleus	31.7	30.1
KRH30618	Soybean	nucleus	30.5	29.95
GSMUA_Achr1P23300_001	Banana	extracellular	16.98	29.63
GSMUA_Achr6P07130_001	Banana	nucleus	18.83	28.92
AT2G27990.1	Thale cress	nucleus	22.15	28.6
GSMUA_Achr4P12180_001	Banana	nucleus	18.3	26.39
GSMUA_Achr5P07020_001	Banana	nucleus	18.17	26.1
GSMUA_Achr1P06400_001	Banana	nucleus	17.24	25.19
GSMUA_Achr5P03130_001	Banana	cytosol	11.14	25.15
GSMUA_Achr3P29230_001	Banana	nucleus	14.99	25.0
GSMUA_Achr9P21580_001	Banana	nucleus	17.77	24.54
GSMUA_Achr7P27440_001	Banana	nucleus	22.15	24.42
GSMUA_Achr6P18180_001	Banana	nucleus	20.42	24.29
GSMUA_Achr2P04310_001	Banana	nucleus	17.51	23.66
GSMUA_Achr4P13590_001	Banana	nucleus	17.77	23.55
GSMUA_Achr9P18740_001	Banana	nucleus	17.9	23.44
GSMUA_Achr4P06630_001	Banana	nucleus	16.05	21.38
GSMUA_Achr2P06420_001	Banana	nucleus	9.95	20.33
GSMUA_Achr2P19430_001	Banana	nucleus	13.79	19.22
GSMUA_AchrUn_...	Banana	nucleus	13.79	17.54
GSMUA_Achr4P02680_001	Banana	nucleus	12.47	16.23

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.5	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr10G06670_001
EnsemblPlants:GSMUA_Achr10P06670_001	EnsemblPlants:GSMUA_Achr10T06670_001	InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356
UniProt:M0RFZ4	PFAM:PF05920	PFAM:PF07526	InterPro:POX_dom	PFscan:PS50071	PANTHER:PTHR11850
PANTHER:PTHR11850:SF125	SMART:SM00389	SMART:SM00574	SUPFAM:SSF46689	UniParc:UPI0002962CFD	SEG:seg

Description

Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G06670_001]

Coordinates

chr10:+:16979785..16991173

Molecular Weight (calculated)

82386.1 Da

IEP (calculated)

8.291

GRAVY (calculated)

-0.376

Length

754 amino acids

Sequence
(BLAST)

001: MLVGIILQLT ADVRRDLHRI MPFDWPEAWT WLLACVSASK ARKLLASKSQ PSPCHPPRAL LSSCPLSLSL STVVPPPTHV SCGRAMNGLR QEAHVAQQSR
101: RDKLRIPSHL LQLRDACDPP MFSSSAAGAA PADFAAGSQV PLIVPSSSAI LGETAAALRG QPGCDWAVHP SLFPDNHSCH QQPKPGFVGY HDGSMDLHYV
201: SLPSPLPSQG RDFVSAVAQQ PCPWAIDSGG NELLFLPGYA ADPANAMLMA RQPPPQWSGD LMSAKYEDAS AVGGSDLRVA RSLSLTLASS PVPELGAAQL
301: EAGPSCPYPK FLISDRVYDS GGSLQDVVTS PGGAAARHPF AGYAAFLKNS RFLRPTQQLL DEFCCNSGAS TSTLYSSVEA GGERGAGSSS GVPKVHRSEF
401: QQKKAKLLHM QEEICRRYKQ YHQQMQMVVS SFESVAGLNS ATPCTSLALK AISKHFRSLK NAISEQIQNI SKVLGEELLS SPSFSRGEAT TTPRSKYLDQ
501: SLQKQKVGES TLSFTGYNQP VWKPQRGLPE RAVSVLRAWL FEHFLHPYPT DTDKHMLATQ TGLSRNQVSN WFINARVRLW KPMIEEIHML ETKGTSGMDF
601: TSANAKHMMP GTDDGARPSM EPVFAADERS QEPWQGDKRS RVEESEMLMS FASYQHAMDI GGIDAVSLTL GLRHEGGQQN PHQMEGRKGE RQNRSDGEKK
701: LETKRKPPCP IDRSFPPSTI LRRLELFDPS GLETDSVNSV RFRTPLGCSL LLLL

Best Arabidopsis Sequence Match ( AT2G27990.1 )
(BLAST)

001: MDMIKPDFQQ IRRDKFRVEQ MNDFPNTWTQ QQHQNIRIPN NLDLIGILQN QISVPVQTDL YQDSAATFMN MPQSIHRDPQ GPSNWRISDL SQPSTVNHGY
101: DQAGIRPNNV ADLLSDHFSS RNQILDRPLY VGRDSIPQSS MIRRSEVSCL DDNQKGCVTV ACSGTGNEIL RSSYDQGSSS GSYRGEFSFL PSLENQSVAH
201: NASNWNHGPV NVTATSHTNS KKGFPLSLLS DIPPSRDVGN AAVLSTMNIH GPLGPFTGYA SILKSSRFLE PAQKMLEEFC ISYASKIISR SESTSMEDDD
301: DDDDNLSGFS SSSEPLEPKN RLKKAKLLFL QEEVCKWYKL YNHQLQTVMS SFNTVAGLNT ATPYISLALK RTSRSFKALR TAIAEHVKQI SSHSSNGNNN
401: NRFQKRQRSL IGNNVGFESQ QQHIWRPQRG LPERAVAVLR AWLFDHFLHP YPTDSDKQML ATQTGLSRNQ VSNWFINARV RLWKPMVEEI HTLETKAIKN
501: ADTSHNIEPS NRPNTVSSPS HEQTLTGLSG TKRSRLEYMD MVGFNRGNVS LTLELRRGVD NVIQTQTQDH QFGTGSQMFH DFVG

Arabidopsis Description

BLH8BEL1-like homeodomain protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJJ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.