Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | nucleus | 33.77 | 25.49 |
| GSMUA_Achr2P06410_001 | Banana | nucleus | 42.86 | 22.76 |
| Bra015844.1-P | Field mustard | nucleus | 59.74 | 15.92 |
| CDX73171 | Canola | nucleus | 59.74 | 15.92 |
| CDY47523 | Canola | nucleus | 59.74 | 15.92 |
| AT1G75430.1 | Thale cress | nucleus | 57.14 | 15.17 |
| GSMUA_Achr11P... | Banana | plastid | 49.35 | 14.45 |
| GSMUA_Achr5P08840_001 | Banana | nucleus | 55.84 | 13.56 |
| GSMUA_Achr4P07450_001 | Banana | nucleus | 53.25 | 13.53 |
| GSMUA_Achr4P14670_001 | Banana | nucleus | 51.95 | 13.47 |
| Solyc04g080780.2.1 | Tomato | nucleus | 63.64 | 12.25 |
| PGSC0003DMT400009609 | Potato | nucleus | 64.94 | 11.82 |
| KRH61118 | Soybean | nucleus | 63.64 | 11.14 |
| KRH51793 | Soybean | nucleus | 63.64 | 10.96 |
| VIT_18s0001g13130.t01 | Wine grape | nucleus | 64.94 | 10.64 |
| GSMUA_Achr1P26900_001 | Banana | nucleus | 54.55 | 10.55 |
| GSMUA_Achr4P04480_001 | Banana | nucleus | 54.55 | 9.98 |
| GSMUA_Achr1P23300_001 | Banana | extracellular | 54.55 | 9.72 |
| GSMUA_Achr10P... | Banana | nucleus | 51.95 | 9.57 |
| GSMUA_Achr3P29230_001 | Banana | nucleus | 54.55 | 9.29 |
| GSMUA_Achr7P14960_001 | Banana | nucleus | 51.95 | 9.09 |
| GSMUA_Achr4P12180_001 | Banana | nucleus | 55.84 | 8.22 |
| GSMUA_Achr9P21580_001 | Banana | nucleus | 55.84 | 7.88 |
| GSMUA_Achr1P06400_001 | Banana | nucleus | 51.95 | 7.75 |
| GSMUA_Achr4P13590_001 | Banana | nucleus | 55.84 | 7.56 |
| GSMUA_Achr5P07020_001 | Banana | nucleus | 50.65 | 7.43 |
| GSMUA_Achr2P04310_001 | Banana | nucleus | 53.25 | 7.35 |
| GSMUA_Achr6P07130_001 | Banana | nucleus | 46.75 | 7.33 |
| GSMUA_Achr9P18740_001 | Banana | nucleus | 53.25 | 7.12 |
| GSMUA_Achr1P03680_001 | Banana | nucleus | 27.27 | 7.09 |
| GSMUA_Achr2P06420_001 | Banana | nucleus | 33.77 | 7.05 |
| GSMUA_Achr2P19430_001 | Banana | nucleus | 48.05 | 6.84 |
| GSMUA_Achr4P06630_001 | Banana | nucleus | 49.35 | 6.71 |
| GSMUA_Achr4P02680_001 | Banana | nucleus | 46.75 | 6.22 |
| GSMUA_Achr10P... | Banana | plastid | 7.79 | 6.19 |
| GSMUA_AchrUn_... | Banana | nucleus | 46.75 | 6.07 |
| GSMUA_Achr6P18180_001 | Banana | nucleus | 49.35 | 5.99 |
| GSMUA_Achr7P27440_001 | Banana | nucleus | 51.95 | 5.85 |
| GSMUA_Achr10P... | Banana | nucleus | 49.35 | 5.04 |
| GSMUA_Achr5P03130_001 | Banana | cytosol | 14.29 | 3.29 |
| GSMUA_Achr11P... | Banana | plastid | 6.49 | 1.23 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr5G03140_001 | EnsemblPlants:GSMUA_Achr5P03140_001 |
| EnsemblPlants:GSMUA_Achr5T03140_001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | UniProt:M0SV93 |
| PFAM:PF05920 | PFscan:PS50071 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF132 | SMART:SM00389 | SUPFAM:SSF46689 |
| UniParc:UPI000295FA59 | : | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G03140_001]
Coordinates
chr5:+:2131191..2132152
Molecular Weight (calculated)
9018.9 Da
IEP (calculated)
8.487
GRAVY (calculated)
-0.373
Length
77 amino acids
Sequence
(BLAST)
(BLAST)
1: MSRLKSNKLD LTILRCVSFL LYPDDTEKLM LASKTGLTRN QISNWFINAR VRIWKPMIEE MYREEFAEDT GNLSTSS
001: MEDFRVRHEC SSLRGTLLDS RYAKAVQCLV EEVIDIGGRE VELCNNILIN QLFPGRRRPG FALSSEIKSE LCSSGFMSLP ENHEIHIKIT KLLSLLQQVE
101: ERFEQYCNQL EQVISSFEEI AGEGSSKVYT GLALQAMTRH FGSLEEAIIS QLNSVRRRFI ISHQDVPKII SSGLSQLSLF DGNTTSSSLQ RLGLVQGPQR
201: HAWKPIRGLP ETSVAILRAW LFQHFLHPYP NEAEKLVLAS QTGLSKNQVS NWFINARVRL WKPMIEEMYR EEFGDSLDES MQREANDDSN
101: ERFEQYCNQL EQVISSFEEI AGEGSSKVYT GLALQAMTRH FGSLEEAIIS QLNSVRRRFI ISHQDVPKII SSGLSQLSLF DGNTTSSSLQ RLGLVQGPQR
201: HAWKPIRGLP ETSVAILRAW LFQHFLHPYP NEAEKLVLAS QTGLSKNQVS NWFINARVRL WKPMIEEMYR EEFGDSLDES MQREANDDSN
Arabidopsis Description
BLH11Uncharacterized protein At1g75430 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV32]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.