Factsheet for GSMUA_Achr11P07620_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 5
plastid 5

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr2P13200_001
GSMUA_Achr3P26230_001
GSMUA_Achr4P03120_001
GSMUA_Achr4P28270_001
GSMUA_Achr4P32230_001
GSMUA_Achr5P01960_001
GSMUA_Achr6P04640_001
GSMUA_Achr7P08050_001
GSMUA_Achr7P27540_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G27990.1	GSMUA_Achr10P...	AT4G08150.1	15781858
AT2G27990.1	GSMUA_Achr2P13200_001	AT4G08150.1	15781858
AT2G27990.1	GSMUA_Achr3P26230_001	AT4G08150.1	15781858
AT2G27990.1	GSMUA_Achr4P03120_001	AT4G08150.1	15781858
AT2G27990.1	GSMUA_Achr4P28270_001	AT4G08150.1	15781858
AT2G27990.1	GSMUA_Achr4P32230_001	AT4G08150.1	15781858
AT2G27990.1	GSMUA_Achr5P01960_001	AT4G08150.1	15781858
AT2G27990.1	GSMUA_Achr6P04640_001	AT4G08150.1	15781858
AT2G27990.1	GSMUA_Achr7P08050_001	AT4G08150.1	15781858
AT2G27990.1	GSMUA_Achr7P27540_001	AT4G08150.1	15781858

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P03140_001	Banana	nucleus	14.45	49.35
GSMUA_Achr10P...	Banana	nucleus	15.97	41.18
GSMUA_Achr10P...	Banana	plastid	14.45	39.18
GSMUA_Achr4P07450_001	Banana	nucleus	40.68	35.31
GSMUA_Achr4P14670_001	Banana	nucleus	38.78	34.34
GSMUA_Achr2P06410_001	Banana	nucleus	18.63	33.79
GSMUA_Achr5P08840_001	Banana	nucleus	38.78	32.18
GSMUA_Achr7P14960_001	Banana	nucleus	44.11	26.36
GSMUA_Achr10P...	Banana	nucleus	74.14	25.86
GSMUA_Achr1P26900_001	Banana	nucleus	37.64	24.87
GSMUA_Achr1P23300_001	Banana	extracellular	40.3	24.54
Solyc11g069890.1.1	Tomato	golgi	52.47	23.79
GSMUA_Achr4P04480_001	Banana	nucleus	36.88	23.04
GSMUA_Achr1P03680_001	Banana	nucleus	25.86	22.97
GSMUA_Achr10P...	Banana	nucleus	36.12	22.73
GSMUA_Achr6P07130_001	Banana	nucleus	39.92	21.38
GSMUA_Achr5P07020_001	Banana	nucleus	42.21	21.14
PGSC0003DMT400020825	Potato	nucleus	53.99	20.52
AT2G27990.1	Thale cress	nucleus	45.25	20.38
GSMUA_Achr1P06400_001	Banana	nucleus	39.16	19.96
GSMUA_Achr9P21580_001	Banana	nucleus	39.92	19.23
KRH25064	Soybean	nucleus	55.51	19.21
GSMUA_Achr4P12180_001	Banana	nucleus	37.64	18.93
GSMUA_Achr2P04310_001	Banana	nucleus	39.54	18.64
KRH30618	Soybean	nucleus	54.37	18.62
KRH22860	Soybean	nucleus	55.13	18.45
GSMUA_Achr3P29230_001	Banana	nucleus	31.56	18.36
KRH26495	Soybean	nucleus	55.13	18.26
GSMUA_Achr4P13590_001	Banana	nucleus	38.4	17.75
GSMUA_Achr6P18180_001	Banana	nucleus	41.83	17.35
GSMUA_Achr9P18740_001	Banana	nucleus	37.26	17.01
VIT_06s0004g02580.t01	Wine grape	nucleus	45.25	15.87
GSMUA_Achr5P03130_001	Banana	cytosol	19.39	15.27
GSMUA_Achr7P27440_001	Banana	nucleus	38.78	14.91
GSMUA_Achr4P06630_001	Banana	nucleus	31.94	14.84
GSMUA_Achr2P19430_001	Banana	nucleus	26.62	12.94
GSMUA_Achr2P06420_001	Banana	nucleus	17.87	12.74
GSMUA_AchrUn_...	Banana	nucleus	26.24	11.64
GSMUA_Achr4P02680_001	Banana	nucleus	23.95	10.88
GSMUA_Achr11P...	Banana	plastid	5.32	3.43

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.5	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr11G07620_001	EnsemblPlants:GSMUA_Achr11P07620_001
EnsemblPlants:GSMUA_Achr11T07620_001	InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356	UniProt:M0RQ92
PFAM:PF05920	PFAM:PF07526	InterPro:POX_dom	PFscan:PS50071	PANTHER:PTHR11850	PANTHER:PTHR11850:SF125
SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI000296062B	:	:	:

Description

Putative BEL1-like homeodomain protein 8 [Source:GMGC_GENE;Acc:GSMUA_Achr11G07620_001]

Coordinates

chr11:-:5928087..5929143

Molecular Weight (calculated)

29307.0 Da

IEP (calculated)

6.315

GRAVY (calculated)

-0.365

Length

263 amino acids

Sequence
(BLAST)

001: MQMVVSSFES VAGLNSATPY TSLALKAISK HFRSLKNAIS DQIRHVSKVL GEELITLSFV DHNQPVWRPQ RGLPERAVSV LRAWLFEHFL HPYPTDTDKH
101: MLATQTGLSR NQVSNWFINA RVRLWKPMIE EIHMLETKGM SGMDLNSATN GKETMVAVTE DGAHSSTYHD PPDCAPMDAV LLNEEGSQQQ AWQGGDKRSR
201: VEECEMLTGM DGGLMSFATY QHAMDMGGIE AVSLTLGLRH EGGQQTPPQM RHLGAQMFHD FVG

Best Arabidopsis Sequence Match ( AT2G27990.1 )
(BLAST)

001: MDMIKPDFQQ IRRDKFRVEQ MNDFPNTWTQ QQHQNIRIPN NLDLIGILQN QISVPVQTDL YQDSAATFMN MPQSIHRDPQ GPSNWRISDL SQPSTVNHGY
101: DQAGIRPNNV ADLLSDHFSS RNQILDRPLY VGRDSIPQSS MIRRSEVSCL DDNQKGCVTV ACSGTGNEIL RSSYDQGSSS GSYRGEFSFL PSLENQSVAH
201: NASNWNHGPV NVTATSHTNS KKGFPLSLLS DIPPSRDVGN AAVLSTMNIH GPLGPFTGYA SILKSSRFLE PAQKMLEEFC ISYASKIISR SESTSMEDDD
301: DDDDNLSGFS SSSEPLEPKN RLKKAKLLFL QEEVCKWYKL YNHQLQTVMS SFNTVAGLNT ATPYISLALK RTSRSFKALR TAIAEHVKQI SSHSSNGNNN
401: NRFQKRQRSL IGNNVGFESQ QQHIWRPQRG LPERAVAVLR AWLFDHFLHP YPTDSDKQML ATQTGLSRNQ VSNWFINARV RLWKPMVEEI HTLETKAIKN
501: ADTSHNIEPS NRPNTVSSPS HEQTLTGLSG TKRSRLEYMD MVGFNRGNVS LTLELRRGVD NVIQTQTQDH QFGTGSQMFH DFVG

Arabidopsis Description

BLH8BEL1-like homeodomain protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJJ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.