Factsheet for GSMUA_Achr6P07130_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	nucleus	47.66	55.98
GSMUA_Achr6P18180_001	Banana	nucleus	62.53	48.42
GSMUA_Achr5P03140_001	Banana	nucleus	7.33	46.75
GSMUA_Achr11P...	Banana	plastid	21.38	39.92
GSMUA_Achr2P06410_001	Banana	nucleus	11.61	39.31
Os11t0158832-00	Rice	nucleus	20.98	39.16
HORVU4Hr1G020710.1	Barley	nucleus	40.33	38.08
GSMUA_Achr5P08840_001	Banana	nucleus	24.24	37.54
GSMUA_Achr1P23300_001	Banana	extracellular	32.99	37.5
TraesCS4B01G114600.1	Wheat	nucleus	50.1	37.16
TraesCS4D01G111900.1	Wheat	nucleus	50.1	37.05
GSMUA_Achr4P14670_001	Banana	nucleus	22.4	37.04
GSMUA_Achr4P07450_001	Banana	nucleus	22.81	36.96
Os11t0158600-00	Rice	nucleus	31.57	36.9
TraesCS4A01G200800.1	Wheat	nucleus	49.9	36.9
Zm00001d053151_P003	Maize	nucleus	50.1	36.66
GSMUA_Achr1P03680_001	Banana	nucleus	22.0	36.49
EES09309	Sorghum	nucleus	51.12	36.38
GSMUA_Achr3P29230_001	Banana	nucleus	32.79	35.62
GSMUA_Achr10P...	Banana	nucleus	7.33	35.29
GSMUA_Achr1P26900_001	Banana	nucleus	28.51	35.18
GSMUA_Achr9P21580_001	Banana	nucleus	38.09	34.25
GSMUA_Achr4P04480_001	Banana	nucleus	26.88	31.35
GSMUA_Achr4P13590_001	Banana	nucleus	36.25	31.28
GSMUA_Achr4P12180_001	Banana	nucleus	33.2	31.17
GSMUA_Achr5P03130_001	Banana	cytosol	21.18	31.14
GSMUA_Achr4P06630_001	Banana	nucleus	35.64	30.92
GSMUA_Achr1P06400_001	Banana	nucleus	30.75	29.26
GSMUA_Achr10P...	Banana	plastid	5.7	28.87
GSMUA_Achr7P14960_001	Banana	nucleus	25.46	28.41
GSMUA_Achr2P04310_001	Banana	nucleus	29.74	26.16
GSMUA_Achr2P06420_001	Banana	nucleus	19.55	26.02
GSMUA_Achr9P18740_001	Banana	nucleus	29.53	25.17
GSMUA_Achr7P27440_001	Banana	nucleus	33.81	24.27
GSMUA_Achr5P07020_001	Banana	nucleus	25.46	23.81
GSMUA_AchrUn_...	Banana	nucleus	25.05	20.74
GSMUA_Achr10P...	Banana	nucleus	28.92	18.83
GSMUA_Achr2P19430_001	Banana	nucleus	20.57	18.67
GSMUA_Achr4P02680_001	Banana	nucleus	21.59	18.31
GSMUA_Achr11P...	Banana	plastid	10.59	12.75

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.5	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr6G07130_001
EnsemblPlants:GSMUA_Achr6P07130_001	EnsemblPlants:GSMUA_Achr6T07130_001	InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356
UniProt:M0T4W2	PFAM:PF05920	PFAM:PF07526	InterPro:POX_dom	PFscan:PS50071	PANTHER:PTHR11850
PANTHER:PTHR11850:SF135	SMART:SM00389	SMART:SM00574	SUPFAM:SSF46689	UniParc:UPI0002964DC5	SEG:seg

Description

homeobox domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G07130_001]

Coordinates

chr6:-:4812580..4814804

Molecular Weight (calculated)

54320.5 Da

IEP (calculated)

9.974

GRAVY (calculated)

-0.521

Length

491 amino acids

Sequence
(BLAST)

001: MATFIHGAPE VQPDGLQTLF LMNPGYAGYM DAAAPANMVL LNSTMNSLNP IILAQAGQPN QQQQDFVGIP LQPAARLRDS DRPLPIHASH DASVLTRLHH
101: NLWTPTPTSN SVDVASQFSP RRRGLSLSLS PHEMAMTPGS AHEVMFAASV GGANGVSGRR SFLMGSKYLK AAQQLLDEVV DVGKGIKDEA AKGPKSRNTE
201: LKGGETTSTK QRADLTTAER QELQMKKAKL ISMLEEAEQR YRKYNHQMQT VIASFEAVAG HGSARTYTVL AQRTISKQFR CLRDAIVGQI RATCKTLGEE
301: DTKLGNSRLR FIDQHLRQQR QMIQPNAWRP QRGLPERSVS VLRAWLFEHF LHPYPTDSDK FMLAKQTGLT RSQVANWFIN ARVRLWKPMV EEIYLEETKH
401: HEQRNADETA TKIDANGRST SKQRIEEQAY PLIAGSSSQG GDHEAYPTFA SRFSGNGVSL TLGLQHSGNL SLSGAQPSIP SSESIWAGGW R

Best Arabidopsis Sequence Match ( AT2G35940.3 )
(BLAST)

001: MAAYFHGNPP EISAGSDGGL QTLILMNPTT YVQYTQQDND SNNNNNSNNS NNNNTNTNTN NNNSSFVFLD SHAPQPNASQ QFVGIPLSGH EAASITAADN
101: ISVLHGYPPR VQYSLYGSHQ VDPTHQQAAC ETPRAQQGLS LTLSSQQQQQ QQHHQQHQPI HVGFGSGHGE DIRVGSGSTG SGVTNGIANL VSSKYLKAAQ
201: ELLDEVVNAD SDDMNAKSQL FSSKKGSCGN DKPVGESSAG AGGEGSGGGA EAAGKRPVEL GTAERQEIQM KKAKLSNMLH EVEQRYRQYH QQMQMVISSF
301: EQAAGIGSAK SYTSLALKTI SRQFRCLKEA IAGQIKAANK SLGEEDSVSG VGRFEGSRLK FVDHHLRQQR ALQQLGMIQH PSNNAWRPQR GLPERAVSVL
401: RAWLFEHFLH PYPKDSDKHM LAKQTGLTRS QVSNWFINAR VRLWKPMVEE MYMEEMKEQA KNMGSMEKTP LDQSNEDSAS KSTSNQEKSP MADTNYHMNP
501: NHNGDLEGVT GMQGSPKRLR TSDETMMQPI NADFSSNEKL TMKILEERQG IRSDGGYPFM GNFGQYQMDE MSRFDVVSDQ ELMAQRYSGN NNGVSLTLGL
601: PHCDSLSSTH HQGFMQTHHG IPIGRRVKIG ETEEYGPATI NGGSSTTTAH SSAAAAAAYN GMNIQNQKRY VAQLLPDFVA

Arabidopsis Description

BLH1BEL1-like homeodomain protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ56]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.