CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
EER90950
EER91090
EER95833
EES03882
EES18336
KXG20488
OQU84501
OQU90921
OQU91064

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G02030.1	EER90950	AT4G08150.1	12897247
AT5G02030.1	EER91090	AT4G08150.1	12897247
AT5G02030.1	EER95833	AT4G08150.1	12897247
AT5G02030.1	OQU90921	AT4G08150.1	12897247
AT5G02030.1	OQU91064	AT4G08150.1	12897247
AT5G02030.1	EER90950	AT4G08150.1	15019989
AT5G02030.1	EER91090	AT4G08150.1	15019989
AT5G02030.1	EER95833	AT4G08150.1	15019989
AT5G02030.1	OQU90921	AT4G08150.1	15019989
AT5G02030.1	OQU91064	AT4G08150.1	15019989
AT5G02030.1	EER90950	AT4G08150.1	15781858
AT5G02030.1	EER91090	AT4G08150.1	15781858
AT5G02030.1	EER95833	AT4G08150.1	15781858
AT5G02030.1	OQU90921	AT4G08150.1	15781858
AT5G02030.1	OQU91064	AT4G08150.1	15781858
AT5G02030.1	KXG20488	AT4G32040.1	15781858
AT5G02030.1	OQU84501	AT4G32040.1	15781858
AT5G02030.1	EES03882	AT5G02030.1	15781858
AT5G02030.1	EES18336	AT5G02030.1	15781858
AT5G02030.1	KXG20488	AT5G25220.1	15781858
AT5G02030.1	OQU84501	AT5G25220.1	15781858

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042864_P002	Maize	nucleus	92.24	93.19
Os01t0848400-01	Rice	nucleus	79.6	77.12
HORVU3Hr1G072010.1	Barley	mitochondrion	15.51	71.88
EES18336	Sorghum	nucleus	67.12	69.82
TraesCS3B01G396100.1	Wheat	nucleus	70.15	67.1
TraesCS3D01G357400.1	Wheat	nucleus	70.15	66.77
TraesCS3A01G363900.1	Wheat	nucleus	70.66	66.72
GSMUA_Achr10P...	Banana	nucleus	11.13	64.71
GSMUA_Achr7P14960_001	Banana	nucleus	41.65	56.14
GSMUA_Achr5P07020_001	Banana	nucleus	42.5	48.0
Solyc10g086640.1.1	Tomato	nucleus	20.74	47.67
GSMUA_Achr10P...	Banana	plastid	7.76	47.42
PGSC0003DMT400062353	Potato	nucleus	34.91	40.99
Solyc09g011380.2.1	Tomato	nucleus	34.74	40.87
HORVU3Hr1G085720.1	Barley	nucleus, plastid	50.42	39.71
KRH00065	Soybean	nucleus	36.59	37.87
VIT_08s0007g01290.t01	Wine grape	nucleus	40.64	37.54
KRH75724	Soybean	nucleus	37.94	36.95
KRH65931	Soybean	nucleus	38.28	36.79
AT5G02030.1	Thale cress	nucleus	35.41	36.52
CDY10473	Canola	nucleus	35.24	36.35
Bra005703.1-P	Field mustard	nucleus	34.74	36.14
CDY48107	Canola	nucleus	34.91	36.0
CDY40327	Canola	nucleus	35.08	35.99
Bra009618.1-P	Field mustard	nucleus	35.41	35.84
CDY69132	Canola	nucleus	34.57	35.71
Bra028883.1-P	Field mustard	nucleus	35.08	35.62
PGSC0003DMT400049235	Potato	nucleus	33.9	34.96
CDY55113	Canola	nucleus	30.02	34.03
CDX80798	Canola	nucleus	29.85	33.27
VIT_13s0019g02450.t01	Wine grape	nucleus	26.14	31.12
KXG37846	Sorghum	nucleus	16.36	27.25
EER89055	Sorghum	nucleus	23.1	26.14
EER92018	Sorghum	nucleus	25.3	23.66
KXG40303	Sorghum	nucleus	24.79	23.48
EER93512	Sorghum	nucleus, plastid	29.34	22.6
EER92806	Sorghum	nucleus	21.42	21.53
EES09309	Sorghum	nucleus	24.62	21.16
KXG24130	Sorghum	nucleus	23.1	20.82
EER91079	Sorghum	nucleus	22.09	20.18
KXG20197	Sorghum	nucleus	14.17	17.0
EES04785	Sorghum	nucleus	14.5	15.25

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.5	EntrezGene:8058906	UniProt:C5XPT0	EnsemblPlants:EES03882	ProteinID:EES03882
ProteinID:EES03882.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom
InterPro:IPR001356	PFAM:PF05920	PFAM:PF07526	InterPro:POX_dom	PFscan:PS50071	PANTHER:PTHR11850
PANTHER:PTHR11850:SF91	SMART:SM00389	SMART:SM00574	EnsemblPlantsGene:SORBI_3003G356200	SUPFAM:SSF46689	UniParc:UPI0001A85901
RefSeq:XP_002458762.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:67444380..67449359

Molecular Weight (calculated)

63834.1 Da

IEP (calculated)

7.510

GRAVY (calculated)

-0.460

Length

593 amino acids

Sequence
(BLAST)

001: MSSAAGGYGG GAGSGAEPHC HGHGHGDFML HHHAQHIAAQ QLYHVPQHSR REKLRFPPDD SPPHASASAP QQQHAGVAWP PPPPPPAFYS YASSSTSSYS
101: PHSPTLAQAQ LVVAHGLAPP PLSSQIPTQN FALSLSSSSS NPPPAPPPQQ RRAHAAPSAP FGPFTGYAAV LGRSRFLGPA EKLLEEICDV GGAASHVDRS
201: VSDEGVLDAD PMEAIDHDMD GADRAASDAG PISGAEQQWK KTRLISMMEE VCKRYRLYYQ QVQTVINSFE TVAGFSNAAP FAAMALRAMA KHFKCLKSMI
301: LSQLRNTKVA AGKEGLSKDI VMFGLAGGSA AALQRASSMA AFGQPHNIWR PQRGLPERAV SVLRAWLFEH FLHPYPTDGD KQMLAKQTGL TRNQVSNWFI
401: NARVRLWKPM VEEIHNLEMR QVHKHPVLDK GQHVLHHQTQ HSSESSGKPS DPSDSHLGQS SSLTRNHNIP ASQGFADELS EMSHSIQQGQ VTFAYNGLST
501: AHHSLASSQH HQQAGPMSGI GGAGNGGVSL TLGLHQNNRV CIAEPLPESL PPNLAHRFGL EEVSDPYMMG SFGNQDRHFG KEMGGHLVHD FVG

Best Arabidopsis Sequence Match ( AT5G02030.1 )
(BLAST)

001: MADAYEPYHV LQQSRRDKLR IPSLDSHFHF HPPPPPSSGG GGGVFPLADS DFLAAGGFHS NNNNNHISNP SYSNFMGFLG GPSSSSSTAV AVAGDHSFNA
101: GLSSGDVLVF KPEPLSLSLS SHPRLAYDLV VPGVVNSGFC RSAGEANAAA VTIASRSSGP LGPFTGYASI LKGSRFLKPA QMLLDEFCNV GRGIYTDKVI
201: DDDDSSLLFD PTVENLCGVS DGGGGDNGKK KSKLISMLDE VYKRYKQYYE QLQAVMGSFE CVAGLGHAAP YANLALKALS KHFKCLKNAI TDQLQFSHNN
301: KIQQQQQCGH PMNSENKTDS LRFGGSDSSR GLCSAGQRHG FPDHHAPVWR PHRGLPERAV TVLRAWLFDH FLHPYPTDTD KLMLAKQTGL SRNQVSNWFI
401: NARVRVWKPM VEEIHMLETR QSQRSSSSSW RDERTSTTVF PDNSNNNPSS SSAQQRPNNS SPPRRARNDD VHGTNNNNSY VNSGSGGGSA VGFSYGIGSS
501: NVPVMNSSTN GGVSLTLGLH HQIGLPEPFP MTTAQRFGLD GGSGDGGGGY EGQNRQFGRD FIGGSNHQFL HDFVG

Arabidopsis Description

BLH9BEL1-like homeodomain protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZM8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.