CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
EER90950
EER91090
EER95833
EES01480
EES19813
KXG20488
KXG40306
OQU84501
OQU90921
OQU91064

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G41410.1	KXG40306	AT1G62990.1	11701881
AT5G41410.1	EER90950	AT4G08150.1	11701881
AT5G41410.1	EER91090	AT4G08150.1	11701881
AT5G41410.1	EER95833	AT4G08150.1	11701881
AT5G41410.1	OQU90921	AT4G08150.1	11701881
AT5G41410.1	OQU91064	AT4G08150.1	11701881
AT5G41410.1	EER90950	AT4G08150.1	15781858
AT5G41410.1	EER91090	AT4G08150.1	15781858
AT5G41410.1	EER95833	AT4G08150.1	15781858
AT5G41410.1	OQU90921	AT4G08150.1	15781858
AT5G41410.1	OQU91064	AT4G08150.1	15781858
AT5G41410.1	EER90950	AT4G08150.1	17873098
AT5G41410.1	EER91090	AT4G08150.1	17873098
AT5G41410.1	EER95833	AT4G08150.1	17873098
AT5G41410.1	OQU90921	AT4G08150.1	17873098
AT5G41410.1	OQU91064	AT4G08150.1	17873098
AT5G41410.1	EES01480	AT4G18830.1	15781858
AT5G41410.1	EES19813	AT4G18830.1	15781858
AT5G41410.1	KXG20488	AT4G32040.1	11701881
AT5G41410.1	OQU84501	AT4G32040.1	11701881
AT5G41410.1	KXG20488	AT4G32040.1	17873098
AT5G41410.1	OQU84501	AT4G32040.1	17873098
AT5G41410.1	KXG20488	AT5G11060.1	11701881
AT5G41410.1	OQU84501	AT5G11060.1	11701881
AT5G41410.1	KXG20488	AT5G25220.1	11701881
AT5G41410.1	OQU84501	AT5G25220.1	11701881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027435_P001	Maize	nucleus	86.1	86.94
Os03t0124000-01	Rice	nucleus	64.38	68.19
TraesCS4B01G345600.1	Wheat	nucleus	63.9	65.47
TraesCS5A01G514700.1	Wheat	nucleus	63.1	65.29
TraesCS4D01G340700.1	Wheat	nucleus	63.9	65.25
HORVU4Hr1G084590.2	Barley	nucleus	64.54	64.95
EER92018	Sorghum	nucleus	54.15	53.47
CDY45383	Canola	nucleus	21.41	50.95
GSMUA_Achr2P04310_001	Banana	nucleus	38.18	42.83
GSMUA_Achr1P06400_001	Banana	nucleus	34.82	42.25
EER89055	Sorghum	nucleus	34.5	41.22
VIT_02s0025g00200.t01	Wine grape	nucleus	40.89	39.63
KRH77572	Soybean	nucleus	40.26	39.01
KRH27902	Soybean	nucleus	39.62	38.63
KRH41225	Soybean	nucleus	38.66	37.46
KRH59951	Soybean	nucleus	37.54	37.01
CDY44476	Canola	nucleus	33.55	36.97
PGSC0003DMT400032122	Potato	nucleus	37.38	36.97
Solyc08g081400.2.1	Tomato	nucleus	37.7	36.65
Bra025497.1-P	Field mustard	nucleus	34.19	36.09
AT5G41410.1	Thale cress	nucleus	34.82	35.68
KXG37846	Sorghum	nucleus	16.77	29.49
EER92806	Sorghum	nucleus	26.52	28.14
EES18336	Sorghum	nucleus	24.28	26.67
EES09309	Sorghum	nucleus	27.48	24.93
EES03882	Sorghum	nucleus	23.48	24.79
EER91079	Sorghum	nucleus	25.4	24.5
EER93512	Sorghum	nucleus, plastid	30.03	24.42
KXG24130	Sorghum	nucleus	25.56	24.32
KXG20197	Sorghum	nucleus	14.7	18.62
EES04785	Sorghum	nucleus	15.65	17.38

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.5	UniProt:A0A1B6QQV6	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf
InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356	ProteinID:KXG40302.1	EnsemblPlants:KXG40303	ProteinID:KXG40303
ProteinID:KXG40303.1	ProteinID:OQU93349.1	PFAM:PF05920	PFAM:PF07526	InterPro:POX_dom	PFscan:PS50071
PANTHER:PTHR11850	PANTHER:PTHR11850:SF105	SMART:SM00389	SMART:SM00574	EnsemblPlantsGene:SORBI_3001G525900	SUPFAM:SSF46689
UniParc:UPI0003C68206	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:78988198..78994119

Molecular Weight (calculated)

66684.6 Da

IEP (calculated)

6.628

GRAVY (calculated)

-0.510

Length

626 amino acids

Sequence
(BLAST)

001: MAHDPSLGFA DYFSAAAAAG ATAMDDDDVG APELYGLHAD MEFLGMRGLA AMPAAAHHHH HHGHGHSKAG VLVDDDAGPD GSGSNTDDAT MRFLSEQQHH
101: PSHQQAPLSL SLCRPDGGGV GVTTSLHEQQ QQLGGGSSRH HQQQHPAPPA AWMQQHDYSP QPQHAWHLRG SRFLVPAQQV LQEFCSLPVD SSSAAASSKR
201: ASKPSSHQQQ EDGGEGSSSS ASWAPSLQIQ AMDALELQRL KDKLYIMLEE VDRRYRRYCE QMRALAGGFE AVAGERAAAA YTALASRTIS RHFRSLRDGV
301: VAQLQAARRA LGEKDVAVPG MTRGDTPRLR VLDQCIRQQK ALTQAGMVEA HPWRPQRGLP ERAVTILRAW LFEHFLHPYP SDVDKHILAR QTGLSRSQVS
401: NWFINARVRL WKPMVEEMYV EEMKAEGQLE DGGGGDQQQG QGVSNNPNPS NAAAEAADDG CGDNGAVVVD RKPTRAQLLH DAGSLASVVN IGSGSRAGAA
501: ARPLENFGIV DHLDFDAYGG GHHAGGGFGG GVSLTLGLQQ HDSHDGGVNI AFGAPPTPAH HHGGAAGYLF APTTTAGHQM GGGLHPGQQH HVQFGGASID
601: GEAAHGQEHY RGLQGAGFHL LRDLAG

Best Arabidopsis Sequence Match ( AT5G41410.1 )
(BLAST)

001: MARDQFYGHN NHHHQEQQHQ MINQIQGFDE TNQNPTDHHH YNHQIFGSNS NMGMMIDFSK QQQIRMTSGS DHHHHHHQTS GGTDQNQLLE DSSSAMRLCN
101: VNNDFPSEVN DERPPQRPSQ GLSLSLSSSN PTSISLQSFE LRPQQQQQQG YSGNKSTQHQ NLQHTQMMMM MMNSHHQNNN NNNHQHHNHH QFQIGSSKYL
201: SPAQELLSEF CSLGVKESDE EVMMMKHKKK QKGKQQEEWD TSHHSNNDQH DQSATTSSKK HVPPLHSLEF MELQKRKAKL LSMLEELKRR YGHYREQMRV
301: AAAAFEAAVG LGGAEIYTAL ASRAMSRHFR CLKDGLVGQI QATSQALGER EEDNRAVSIA ARGETPRLRL LDQALRQQKS YRQMTLVDAH PWRPQRGLPE
401: RAVTTLRAWL FEHFLHPYPS DVDKHILARQ TGLSRSQVSN WFINARVRLW KPMIEEMYCE ETRSEQMEIT NPMMIDTKPD PDQLIRVEPE SLSSIVTNPT
501: SKSGHNSTHG TMSLGSTFDF SLYGNQAVTY AGEGGPRGDV SLTLGLQRND GNGGVSLALS PVTAQGGQLF YGRDHIEEGP VQYSASMLDD DQVQNLPYRN
601: LMGAQLLHDI V

Arabidopsis Description

BEL1Homeobox protein BEL1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q38897]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.