Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032147.1-P | Field mustard | nucleus | 48.92 | 99.06 |
| CDY39669 | Canola | nucleus | 98.15 | 98.6 |
| CDY46061 | Canola | nucleus | 85.96 | 91.61 |
| CDX76849 | Canola | nucleus | 84.72 | 91.35 |
| AT2G23760.4 | Thale cress | nucleus | 85.96 | 82.03 |
| CDX75604 | Canola | nucleus | 64.97 | 62.93 |
| CDX69252 | Canola | nucleus | 64.51 | 62.67 |
| CDY22463 | Canola | nucleus | 61.27 | 59.25 |
| GSMUA_Achr5P08840_001 | Banana | nucleus | 28.7 | 58.68 |
| GSMUA_Achr4P14670_001 | Banana | nucleus | 26.54 | 57.91 |
| CDY24765 | Canola | nucleus | 59.57 | 57.87 |
| GSMUA_Achr4P07450_001 | Banana | nucleus | 26.85 | 57.43 |
| GSMUA_Achr1P26900_001 | Banana | nucleus | 33.95 | 55.28 |
| CDX83753 | Canola | nucleus | 14.51 | 49.47 |
| KRH76894 | Soybean | nucleus | 52.16 | 47.61 |
| KRH28575 | Soybean | nucleus | 51.54 | 47.38 |
| KRH69971 | Soybean | nucleus | 48.15 | 46.29 |
| Solyc02g089940.2.1 | Tomato | nucleus | 50.46 | 45.04 |
| PGSC0003DMT400026172 | Potato | nucleus | 51.08 | 44.85 |
| KRH08329 | Soybean | nucleus | 52.78 | 44.02 |
| VIT_04s0023g01020.t01 | Wine grape | nucleus | 55.4 | 42.44 |
| GSMUA_Achr7P27440_001 | Banana | nucleus | 43.83 | 41.52 |
| CDY45383 | Canola | nucleus | 16.51 | 40.68 |
| CDY21826 | Canola | extracellular, plastid | 5.86 | 39.58 |
| TraesCS4B01G063100.1 | Wheat | nucleus, plastid | 43.67 | 38.19 |
| Zm00001d033898_P002 | Maize | nucleus | 44.44 | 38.15 |
| EER93512 | Sorghum | nucleus, plastid | 45.06 | 37.92 |
| CDX73171 | Canola | nucleus | 16.67 | 37.37 |
| TraesCS4A01G252100.2 | Wheat | nucleus | 44.14 | 37.09 |
| CDY47523 | Canola | nucleus | 16.51 | 37.02 |
| Os03t0732100-01 | Rice | nucleus | 44.75 | 36.71 |
| TraesCS4D01G062100.1 | Wheat | nucleus | 44.29 | 35.74 |
| HORVU4Hr1G010430.6 | Barley | nucleus | 44.14 | 35.35 |
| CDY46209 | Canola | nucleus | 20.37 | 34.92 |
| CDX89711 | Canola | nucleus | 24.07 | 34.29 |
| CDY29411 | Canola | nucleus | 20.52 | 34.19 |
| CDY02261 | Canola | nucleus | 23.46 | 33.85 |
| CDX75307 | Canola | nucleus | 11.42 | 33.33 |
| CDY52073 | Canola | nucleus | 23.3 | 32.06 |
| CDY39031 | Canola | nucleus | 23.3 | 31.59 |
| CDX68129 | Canola | nucleus | 22.38 | 30.66 |
| CDY47524 | Canola | nucleus | 24.23 | 30.43 |
| CDX73170 | Canola | nucleus | 24.07 | 30.35 |
| CDY44476 | Canola | nucleus | 26.39 | 30.11 |
| CDX85896 | Canola | nucleus | 22.99 | 29.62 |
| CDX96653 | Canola | nucleus | 21.91 | 28.06 |
| CDY63699 | Canola | nucleus | 17.9 | 27.75 |
| CDY39359 | Canola | nucleus | 21.91 | 27.36 |
| CDY30566 | Canola | nucleus | 18.83 | 27.23 |
| CDX77099 | Canola | nucleus | 18.83 | 27.17 |
| CDX71279 | Canola | nucleus | 16.05 | 26.8 |
| CDY40420 | Canola | nucleus | 25.77 | 26.42 |
| CDY10473 | Canola | nucleus | 23.3 | 26.26 |
| CDY32069 | Canola | nucleus | 25.77 | 26.26 |
| CDY40327 | Canola | nucleus | 23.3 | 26.12 |
| CDY69132 | Canola | nucleus | 22.53 | 25.44 |
| CDY48107 | Canola | nucleus | 22.53 | 25.39 |
| CDX84171 | Canola | nucleus | 22.53 | 24.83 |
| CDX84585 | Canola | nucleus | 25.62 | 24.74 |
| CDX79646 | Canola | nucleus | 25.93 | 24.31 |
| CDY55113 | Canola | nucleus | 19.44 | 24.09 |
| CDX75085 | Canola | nucleus | 23.15 | 23.89 |
| CDX80798 | Canola | nucleus | 19.14 | 23.31 |
| CDY13511 | Canola | nucleus | 15.12 | 22.43 |
| CDY45321 | Canola | nucleus, plastid | 23.61 | 22.34 |
| CDX68927 | Canola | nucleus | 15.43 | 21.69 |
| CDX75313 | Canola | nucleus | 15.59 | 21.67 |
| CDX72383 | Canola | nucleus | 14.51 | 20.8 |
| CDX68925 | Canola | cytosol | 4.17 | 14.92 |
| CDX68906 | Canola | nucleus | 4.78 | 11.97 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.5 | GO:A0A078JCR1 | UniProt:A0A078JCR1 | EnsemblPlants:CDY62523 | ProteinID:CDY62523 |
| ProteinID:CDY62523.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00036362001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain |
| InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF05920 | PFAM:PF07526 | InterPro:POX_dom | PFscan:PS50071 |
| PANTHER:PTHR11850 | PANTHER:PTHR11850:SF136 | SMART:SM00389 | SMART:SM00574 | SUPFAM:SSF46689 | UniParc:UPI0004EC3B8E |
| SEG:seg | : | : | : | : | : |
Description
BnaC04g56300DBnaC04g56300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JCR1]
Coordinates
chrLK034156:-:25831..31649
Molecular Weight (calculated)
71455.9 Da
IEP (calculated)
7.058
GRAVY (calculated)
-0.760
Length
648 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLATTTVPH HHHKKTLDNS LDSMSQDYHH HQGIFSFSSG FHRPSSSHQE EVEESAVSGA QIPVYETAGM LSEMFSYPGG GNGGSGEIPD HSTKQLLEQQ
101: NRHNNNNSTL HMLLPNHHHH QGYGYPNEQQ FTWPSSSDHH QSQGDMIGTV HVEGGKGLSL SLSSSLEAAA AAAKAEEYRS IYCAAVDGTS SSSNASVHHH
201: QFNQLKTLLL DNSSSHQHQV MGHFGSSSSS PMAASSSIGG IYTLRNSKYT KPAQELLEEF CSVGRGHNFK KNKLSRNNSN PNTSGCGGGG GGGGGGSSSS
301: AGAANDNPPL SPADRIEHQR RKVKLLSMLE EVDRRYNHYC EQMQMVVNSF DQVMGYGAAV PYTTLAQKAM SRHFRCLKDA VAVQLKRSCE LLGDKESAGA
401: ASSGLTKGET PRLRLLEQSL RQQRAFHHMG MMEQEAWRPQ RGLPERSVNI LRAWLFEHFL NPYPSDADKH LLARQTGLSR NQVSNWFINA RVRLWKPMVE
501: EMYQQEAKER EEEELGENKK EDYQHQRRHQ QTNNKDTKPN ESNFTLVQTI TAQTPTTTMM TSTPHENDPS FLPPSTSVAT APSLGVSGAF TVSTCQQDVS
601: DFHVEDGVIR FGTKQAGDVS LTLGLRHTGN MPDNNKNPSF SVRDFGDF
101: NRHNNNNSTL HMLLPNHHHH QGYGYPNEQQ FTWPSSSDHH QSQGDMIGTV HVEGGKGLSL SLSSSLEAAA AAAKAEEYRS IYCAAVDGTS SSSNASVHHH
201: QFNQLKTLLL DNSSSHQHQV MGHFGSSSSS PMAASSSIGG IYTLRNSKYT KPAQELLEEF CSVGRGHNFK KNKLSRNNSN PNTSGCGGGG GGGGGGSSSS
301: AGAANDNPPL SPADRIEHQR RKVKLLSMLE EVDRRYNHYC EQMQMVVNSF DQVMGYGAAV PYTTLAQKAM SRHFRCLKDA VAVQLKRSCE LLGDKESAGA
401: ASSGLTKGET PRLRLLEQSL RQQRAFHHMG MMEQEAWRPQ RGLPERSVNI LRAWLFEHFL NPYPSDADKH LLARQTGLSR NQVSNWFINA RVRLWKPMVE
501: EMYQQEAKER EEEELGENKK EDYQHQRRHQ QTNNKDTKPN ESNFTLVQTI TAQTPTTTMM TSTPHENDPS FLPPSTSVAT APSLGVSGAF TVSTCQQDVS
601: DFHVEDGVIR FGTKQAGDVS LTLGLRHTGN MPDNNKNPSF SVRDFGDF
001: MGLATTTSSM SQDYHHHQGI FSFSNGFHRS SSTTHQEEVD ESAVVSGAQI PVYETAGMLS EMFAYPGGGG GGSGGEILDQ STKQLLEQQN RHNNNNNSTL
101: HMLLPNHHQG FAFTDENTMQ PQQQQHFTWP SSSSDHHQNR DMIGTVHVEG GKGLSLSLSS SLAAAKAEEY RSIYCAAVDG TSSSSNASAH HHQFNQFKNL
201: LLENSSSQHH HHQVVGHFGS SSSSPMAASS SIGGIYTLRN SKYTKPAQEL LEEFCSVGRG HFKKNKLSRN NSNPNTTGGG GGGGSSSSAG TANDSPPLSP
301: ADRIEHQRRK VKLLSMLEEV DRRYNHYCEQ MQMVVNSFDQ VMGYGAAVPY TTLAQKAMSR HFRCLKDAVA VQLKRSCELL GDKEAAGAAS SGLTKGETPR
401: LRLLEQSLRQ QRAFHHMGMM EQEAWRPQRG LPERSVNILR AWLFEHFLNP YPSDADKHLL ARQTGLSRNQ VSNWFINARV RLWKPMVEEM YQQEAKEREE
501: AEEENENQQQ QRRQQQTNNN DTKPNNNENN FTVITAQTPT TMTSTHHEND SSFLSSVAAA SHGGSDAFTV ATCQQDVSDF HVDGDGVNVI RFGTKQTGDV
601: SLTLGLRHSG NIPDKNTSFS VRDFGDF
101: HMLLPNHHQG FAFTDENTMQ PQQQQHFTWP SSSSDHHQNR DMIGTVHVEG GKGLSLSLSS SLAAAKAEEY RSIYCAAVDG TSSSSNASAH HHQFNQFKNL
201: LLENSSSQHH HHQVVGHFGS SSSSPMAASS SIGGIYTLRN SKYTKPAQEL LEEFCSVGRG HFKKNKLSRN NSNPNTTGGG GGGGSSSSAG TANDSPPLSP
301: ADRIEHQRRK VKLLSMLEEV DRRYNHYCEQ MQMVVNSFDQ VMGYGAAVPY TTLAQKAMSR HFRCLKDAVA VQLKRSCELL GDKEAAGAAS SGLTKGETPR
401: LRLLEQSLRQ QRAFHHMGMM EQEAWRPQRG LPERSVNILR AWLFEHFLNP YPSDADKHLL ARQTGLSRNQ VSNWFINARV RLWKPMVEEM YQQEAKEREE
501: AEEENENQQQ QRRQQQTNNN DTKPNNNENN FTVITAQTPT TMTSTHHEND SSFLSSVAAA SHGGSDAFTV ATCQQDVSDF HVDGDGVNVI RFGTKQTGDV
601: SLTLGLRHSG NIPDKNTSFS VRDFGDF
Arabidopsis Description
BLH4BEL1-like homeodomain 4 [Source:TAIR;Acc:AT2G23760]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.