Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34012 | Canola | nucleus | 45.23 | 93.26 |
| Bra000638.1-P | Field mustard | nucleus | 88.44 | 90.96 |
| CDX83145 | Canola | nucleus | 88.19 | 87.31 |
| Os03t0673000-00 | Rice | nucleus | 16.33 | 84.42 |
| CDY68624 | Canola | nucleus | 70.85 | 80.8 |
| GSMUA_Achr5P01960_001 | Banana | nucleus | 34.17 | 70.83 |
| VIT_18s0001g08380.t01 | Wine grape | nucleus | 62.56 | 67.3 |
| GSMUA_Achr7P08050_001 | Banana | nucleus | 42.96 | 64.29 |
| GSMUA_Achr4P28270_001 | Banana | nucleus | 43.72 | 64.21 |
| Solyc04g077210.2.1 | Tomato | nucleus | 57.04 | 63.94 |
| PGSC0003DMT400012712 | Potato | nucleus | 57.04 | 63.06 |
| KRH61471 | Soybean | nucleus | 56.53 | 62.33 |
| GSMUA_Achr2P13200_001 | Banana | nucleus | 51.26 | 58.12 |
| TraesCS2A01G267400.1 | Wheat | nucleus | 49.5 | 56.77 |
| TraesCS2B01G268200.1 | Wheat | nucleus | 49.5 | 56.77 |
| TraesCS2D01G256400.1 | Wheat | nucleus | 49.25 | 56.48 |
| Zm00001d018742_P001 | Maize | nucleus | 49.75 | 56.41 |
| GSMUA_Achr4P03120_001 | Banana | nucleus | 40.7 | 55.86 |
| GSMUA_Achr7P27540_001 | Banana | nucleus | 48.99 | 55.71 |
| Os07t0129700-01 | Rice | nucleus | 49.5 | 55.49 |
| GSMUA_Achr10P... | Banana | nucleus | 36.18 | 55.38 |
| EER95833 | Sorghum | nucleus | 49.5 | 55.34 |
| GSMUA_Achr3P26230_001 | Banana | nucleus | 44.72 | 55.28 |
| Os03t0727000-02 | Rice | nucleus | 50.0 | 55.12 |
| TraesCS4D01G058000.1 | Wheat | nucleus | 49.25 | 54.14 |
| TraesCS4A01G256700.1 | Wheat | nucleus | 49.25 | 54.14 |
| TraesCS5B01G410600.1 | Wheat | nucleus | 42.96 | 54.11 |
| TraesCS4B01G057900.1 | Wheat | nucleus | 49.25 | 53.99 |
| HORVU2Hr1G061320.3 | Barley | nucleus, plastid | 48.49 | 53.91 |
| Zm00001d007842_P002 | Maize | nucleus | 48.74 | 53.89 |
| HORVU4Hr1G009730.1 | Barley | nucleus | 49.25 | 53.85 |
| EER90950 | Sorghum | nucleus | 48.49 | 53.61 |
| Zm00001d033859_P002 | Maize | nucleus | 48.24 | 53.48 |
| GSMUA_Achr4P32230_001 | Banana | nucleus | 46.23 | 53.33 |
| GSMUA_Achr6P04640_001 | Banana | nucleus | 47.74 | 53.22 |
| TraesCS5A01G405900.1 | Wheat | nucleus | 43.47 | 51.95 |
| TraesCS5D01G415900.1 | Wheat | nucleus | 43.72 | 51.33 |
| OQU90921 | Sorghum | nucleus | 43.47 | 49.57 |
| TraesCS4A01G292200.1 | Wheat | nucleus | 37.94 | 47.34 |
| TraesCS4B01G021900.2 | Wheat | nucleus | 37.94 | 46.46 |
| EER91090 | Sorghum | nucleus | 38.69 | 46.11 |
| HORVU4Hr1G003360.1 | Barley | nucleus | 37.19 | 46.11 |
| Os03t0771500-01 | Rice | nucleus | 38.44 | 45.54 |
| TraesCS4D01G019600.1 | Wheat | nucleus | 37.94 | 44.41 |
| Zm00001d033861_P001 | Maize | nucleus | 39.7 | 43.89 |
| OQU91064 | Sorghum | nucleus | 40.7 | 43.67 |
| AT1G23380.2 | Thale cress | nucleus | 35.43 | 42.86 |
| AT1G62360.1 | Thale cress | nucleus | 40.95 | 42.67 |
| HORVU5Hr1G098570.6 | Barley | plastid | 43.47 | 42.61 |
| Os03t0727200-00 | Rice | nucleus | 38.69 | 42.19 |
| AT1G70510.2 | Thale cress | nucleus | 32.41 | 41.08 |
| TraesCS4B01G022000.1 | Wheat | nucleus | 30.9 | 41.0 |
| Zm00001d033404_P002 | Maize | nucleus | 37.94 | 40.7 |
| TraesCS4D01G019800.1 | Wheat | nucleus | 32.41 | 40.06 |
| TraesCS4D01G019900.1 | Wheat | nucleus | 31.66 | 38.65 |
| Os03t0673500-00 | Rice | nucleus | 33.17 | 38.37 |
| TraesCS4A01G291900.1 | Wheat | nucleus | 31.66 | 38.3 |
| TraesCS4A01G292100.1 | Wheat | nucleus | 31.66 | 38.18 |
| Zm00001d013559_P001 | Maize | cytosol, mitochondrion, nucleus | 15.58 | 38.04 |
| HORVU4Hr1G003410.3 | Barley | nucleus | 32.66 | 36.83 |
| Zm00001d034212_P001 | Maize | nucleus | 44.47 | 36.57 |
| TraesCS4A01G292000.1 | Wheat | cytosol, nucleus, plastid | 12.81 | 33.55 |
| TraesCS4A01G251800.1 | Wheat | nucleus | 13.07 | 31.33 |
| Os03t0772100-00 | Rice | vacuole | 32.16 | 30.77 |
| AT1G62990.1 | Thale cress | nucleus | 19.6 | 26.8 |
| AT4G32040.1 | Thale cress | nucleus | 22.86 | 23.76 |
| AT5G11060.1 | Thale cress | nucleus | 22.86 | 23.16 |
| AT5G25220.1 | Thale cress | nucleus | 24.37 | 22.51 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.4 | EntrezGene:826364 | ProteinID:AAA67881.1 | ProteinID:AAD27897.1 | ProteinID:AEE82597.1 |
| EMBL:AF482994 | EMBL:AF482995 | ArrayExpress:AT4G08150 | EnsemblPlantsGene:AT4G08150 | RefSeq:AT4G08150 | TAIR:AT4G08150 |
| RefSeq:AT4G08150-TAIR-G | EnsemblPlants:AT4G08150.1 | TAIR:AT4G08150.1 | EMBL:AY080834 | EMBL:AY113982 | Unigene:At.28060 |
| ProteinID:CAB81151.1 | InterPro:ELK_dom | GO:GO:0001708 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0010051 | GO:GO:0010089 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0045165 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 |
| InterPro:IPR005539 | Symbol:KNAT1 | InterPro:KNOX1 | InterPro:KNOX2 | RefSeq:NP_192555.1 | UniProt:P46639 |
| PFAM:PF03789 | PFAM:PF03790 | PFAM:PF03791 | PFAM:PF05920 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000223 | PO:PO:0000225 | PO:PO:0000226 | PO:PO:0000230 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0004721 | PO:PO:0004722 | PO:PO:0005022 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009052 | PO:PO:0009074 | PO:PO:0020100 | PO:PO:0025022 | PO:PO:0025272 | PO:PO:0025281 |
| ScanProsite:PS00027 | PFscan:PS50071 | PFscan:PS51213 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF203 | SMART:SM00389 |
| SMART:SM01188 | SMART:SM01255 | SMART:SM01256 | SUPFAM:SSF46689 | UniParc:UPI00000017AB | SEG:seg |
Description
KNAT1Homeobox protein knotted-1-like 1 [Source:UniProtKB/Swiss-Prot;Acc:P46639]
Coordinates
chr4:-:5147699..5151159
Molecular Weight (calculated)
45838.0 Da
IEP (calculated)
6.467
GRAVY (calculated)
-1.113
Length
398 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEYQHDNST TPQRVSFLYS PISSSNKNDN TSDTNNNNNN NNSSNYGPGY NNTNNNNHHH QHMLFPHMSS LLPQTTENCF RSDHDQPNNN NNPSVKSEAS
101: SSRINHYSML MRAIHNTQEA NNNNNDNVSD VEAMKAKIIA HPHYSTLLQA YLDCQKIGAP PDVVDRITAA RQDFEARQQR STPSVSASSR DPELDQFMEA
201: YCDMLVKYRE ELTRPIQEAM EFIRRIESQL SMLCQSPIHI LNNPDGKSDN MGSSDEEQEN NSGGETELPE IDPRAEDREL KNHLLKKYSG YLSSLKQELS
301: KKKKKGKLPK EARQKLLTWW ELHYKWPYPS ESEKVALAES TGLDQKQINN WFINQRKRHW KPSEDMQFMV MDGLQHPHHA ALYMDGHYMG DGPYRLGP
101: SSRINHYSML MRAIHNTQEA NNNNNDNVSD VEAMKAKIIA HPHYSTLLQA YLDCQKIGAP PDVVDRITAA RQDFEARQQR STPSVSASSR DPELDQFMEA
201: YCDMLVKYRE ELTRPIQEAM EFIRRIESQL SMLCQSPIHI LNNPDGKSDN MGSSDEEQEN NSGGETELPE IDPRAEDREL KNHLLKKYSG YLSSLKQELS
301: KKKKKGKLPK EARQKLLTWW ELHYKWPYPS ESEKVALAES TGLDQKQINN WFINQRKRHW KPSEDMQFMV MDGLQHPHHA ALYMDGHYMG DGPYRLGP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.