CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH61712	Soybean	nucleus	92.21	89.29
TraesCS5B01G454600.1	Wheat	nucleus	37.44	84.66
TraesCS6D01G134800.1	Wheat	nucleus	40.45	77.78
KRH15810	Soybean	nucleus	75.88	73.3
KRH05245	Soybean	nucleus	75.63	73.24
Solyc08g041820.2.1	Tomato	nucleus	63.57	72.49
PGSC0003DMT400040351	Potato	nucleus	64.57	70.41
OQU84501	Sorghum	nucleus	53.02	68.95
KRH20116	Soybean	nucleus	59.8	68.79
KRH03552	Soybean	nucleus	59.55	68.7
TraesCS6B01G173900.1	Wheat	nucleus	51.26	68.46
KRH77464	Soybean	nucleus	48.24	68.33
KRH27981	Soybean	nucleus	47.49	67.74
Os02t0182800-01	Rice	nucleus	53.27	67.73
TraesCS6A01G145500.1	Wheat	nucleus	52.01	67.65
Zm00001d046568_P001	Maize	nucleus	53.27	67.09
KXG20488	Sorghum	nucleus	53.77	67.08
TraesCS7D01G501000.1	Wheat	nucleus	52.01	66.99
HORVU6Hr1G028610.2	Barley	nucleus	51.76	66.67
TraesCS1B01G135600.1	Wheat	nucleus	46.48	65.84
KRH12889	Soybean	nucleus	61.06	65.68
Os06t0646600-01	Rice	nucleus	53.27	65.63
KRH37876	Soybean	nucleus	60.8	65.58
Zm00001d053749_P002	Maize	nucleus	52.51	65.52
Zm00001d015549_P001	Maize	nucleus	52.76	64.62
KRH57265	Soybean	nucleus	47.49	64.51
KRH03996	Soybean	nucleus	47.24	64.38
KRG98594	Soybean	extracellular	13.07	63.41
TraesCS7B01G423100.2	Wheat	nucleus	51.51	61.19
HORVU7Hr1G114650.2	Barley	nucleus	48.49	59.75
TraesCS7A01G511800.2	Wheat	nucleus	51.76	51.5
KRG99390	Soybean	nucleus	12.06	36.64
KRH73380	Soybean	nucleus	5.53	33.85
KRH02013	Soybean	nucleus	20.35	30.11
KRH33819	Soybean	nucleus	22.11	29.73
KRH69600	Soybean	nucleus	22.11	28.57
KRH74562	Soybean	nucleus	22.11	28.48
KRH63561	Soybean	nucleus	19.6	28.06
KRG90534	Soybean	nucleus	21.61	28.01
KRH68434	Soybean	nucleus	21.11	27.36
KRH45633	Soybean	nucleus	21.61	26.79
KRG96717	Soybean	nucleus	20.85	26.69
KRH11492	Soybean	nucleus	23.12	24.53
KRH15482	Soybean	nucleus	23.62	24.42
KRG88661	Soybean	nucleus	23.62	24.29
KRH14756	Soybean	nucleus	19.6	24.0
KRH51140	Soybean	nucleus	21.61	23.76
KRH36506	Soybean	nucleus	22.61	23.75
KRH61471	Soybean	nucleus	21.36	23.55
KRG99387	Soybean	nucleus	9.55	19.79
KRH73381	Soybean	cytosol	11.31	19.57

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.4	EMBL:ACUP02003419	InterPro:ELK_dom	EnsemblPlantsGene:GLYMA_06G065200	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:IPR005539
UniProt:K7KTF9	InterPro:KNOX1	InterPro:KNOX2	EnsemblPlants:KRH52385	ProteinID:KRH52385	ProteinID:KRH52385.1
PFAM:PF03789	PFAM:PF03790	PFAM:PF03791	PFAM:PF05920	PFscan:PS50071	PFscan:PS51213
PANTHER:PTHR11850	PANTHER:PTHR11850:SF95	SMART:SM00389	SMART:SM01188	SMART:SM01255	SMART:SM01256
SUPFAM:SSF46689	UniParc:UPI0002958329	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:4993117..4996205

Molecular Weight (calculated)

44610.0 Da

IEP (calculated)

6.342

GRAVY (calculated)

-0.699

Length

398 amino acids

Sequence
(BLAST)

001: MAYHNPQDLP LHHFTDQQQH HNHTLPHNSL LSDPASKPAS DPHQPAPNWL NNALLRTDYT HTTTTTTTNT AANNSNNSTN FLNLHTSASD SGQWQARPIL
101: NRNHSEVIDD VAGAGAESGD LKGETAPVDG LLNWQNARLK AEILTHPLYE QLLSAHVACL RIATPVDQLP RIDAQLAQSQ NVVAKYSAFG QAIVGDDKEL
201: DQFLSHYVLL LCSFKEQLQQ HVRVHAMEAV MACWEIEQSL QSLTGVSPGE GTGATMSDDE DEQVDSDANL FDGALDGPDS MGFGPLIPTE NERSLMERVR
301: HELKHELKQG YKDKIVDIRE EILRKRRAGK LPGDTTSVLK AWWQSHSKWP YPTEEDKARL VQETGLQLKQ INNWFINQRK RNWHSSPSTS TVLKSKRK

Best Arabidopsis Sequence Match ( AT5G25220.1 )
(BLAST)

001: MAFHHNHLSQ DLSFNHFTDQ HQPPPPQPPP PPPQQQQHFQ EAPPPNWLNT ALLRSSDNNN NFLNLHTATA NTTTASSSDS PSSAAAAAAA NQWLSRSSSF
101: LQRNNNNNAS IVGDGIDDVT GGADTMIQGE MKTGGGENKN DGGGATAADG VVSWQNARHK AEILSHPLYE QLLSAHVACL RIATPVDQLP RIDAQLAQSQ
201: HVVAKYSALG AAAQGLVGDD KELDQFMTHY VLLLCSFKEQ LQQHVRVHAM EAVMACWEIE QSLQSLTGVS PGEGMGATMS DDEDEQVESD ANMFDGGLDV
301: LGFGPLIPTE SERSLMERVR QELKHELKQG YKEKIVDIRE EILRKRRAGK LPGDTTSVLK AWWQSHSKWP YPTEEDKARL VQETGLQLKQ INNWFINQRK
401: RNWHSNPSSS TVLKNKRKSN AGDNSGRERF A

Arabidopsis Description

KNAT3KNAT3 [Source:UniProtKB/TrEMBL;Acc:A0A178U9D1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.