Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 1
- mitochondrion 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G36026.1 | Thale cress | nucleus, plastid | 65.41 | 56.83 |
| Solyc10g082050.1.1 | Tomato | mitochondrion | 50.94 | 45.51 |
| KRH32810 | Soybean | mitochondrion | 46.54 | 41.81 |
| PGSC0003DMT400072347 | Potato | mitochondrion, plastid | 49.69 | 41.8 |
| KRH72226 | Soybean | mitochondrion | 45.28 | 41.38 |
| Solyc01g007800.2.1 | Tomato | mitochondrion | 47.17 | 41.21 |
| VIT_08s0007g02550.t01 | Wine grape | mitochondrion, plastid | 47.8 | 40.86 |
| PGSC0003DMT400042334 | Potato | mitochondrion | 45.91 | 39.67 |
| KRH67981 | Soybean | mitochondrion | 47.17 | 39.47 |
| KRG96237 | Soybean | mitochondrion | 46.54 | 38.74 |
| GSMUA_Achr9P02660_001 | Banana | mitochondrion | 30.82 | 24.75 |
| GSMUA_Achr6P18350_001 | Banana | mitochondrion | 32.7 | 24.07 |
| AT5G19650.1 | Thale cress | mitochondrion, nucleus | 33.33 | 23.98 |
| GSMUA_Achr6P19470_001 | Banana | nucleus | 27.67 | 23.66 |
| GSMUA_Achr11P... | Banana | plastid | 25.16 | 23.26 |
| GSMUA_Achr5P20250_001 | Banana | plastid | 29.56 | 22.71 |
| GSMUA_Achr8P12190_001 | Banana | plastid | 27.67 | 22.45 |
| GSMUA_Achr1P03740_001 | Banana | plastid | 24.53 | 22.41 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 30.19 | 21.62 |
| TraesCS1B01G193300.1 | Wheat | mitochondrion | 33.33 | 21.54 |
| TraesCS1D01G191500.1 | Wheat | mitochondrion | 33.33 | 21.54 |
| Zm00001d029718_P001 | Maize | mitochondrion | 35.22 | 21.54 |
| HORVU1Hr1G049440.1 | Barley | mitochondrion | 33.33 | 21.29 |
| TraesCS1A01G185400.1 | Wheat | mitochondrion | 32.7 | 21.14 |
| EES03931 | Sorghum | plastid | 30.19 | 20.34 |
| Os01t0864000-01 | Rice | mitochondrion, plastid | 28.93 | 20.18 |
| HORVU3Hr1G083700.1 | Barley | plastid | 28.3 | 20.09 |
| TraesCS3A01G376000.1 | Wheat | plastid | 28.3 | 20.09 |
| TraesCS3B01G408300.1 | Wheat | plastid | 28.3 | 19.91 |
| Os10t0532600-01 | Rice | mitochondrion | 32.7 | 19.77 |
| Zm00001d012282_P001 | Maize | nucleus, plastid | 30.19 | 19.43 |
| TraesCS3D01G368500.1 | Wheat | plastid | 27.67 | 19.38 |
| Os02t0679700-01 | Rice | plastid | 33.96 | 19.22 |
| Zm00001d042752_P001 | Maize | nucleus, plastid | 29.56 | 19.11 |
| EER94592 | Sorghum | mitochondrion | 33.33 | 18.79 |
| TraesCS4D01G316300.1 | Wheat | nucleus, plastid | 26.42 | 18.58 |
| TraesCS5A01G492400.1 | Wheat | nucleus | 27.04 | 18.45 |
| EER92948 | Sorghum | plastid | 29.56 | 18.43 |
| Zm00001d047346_P001 | Maize | mitochondrion | 31.45 | 18.18 |
| TraesCS1B01G284700.1 | Wheat | plastid | 25.79 | 18.14 |
| TraesCS1A01G275500.1 | Wheat | nucleus, plastid | 25.79 | 17.9 |
| TraesCS1D01G275100.1 | Wheat | plastid | 25.79 | 17.9 |
| Zm00001d027453_P001 | Maize | plastid | 27.67 | 17.81 |
| HORVU1Hr1G074020.1 | Barley | nucleus, plastid | 25.16 | 17.62 |
| EES18304 | Sorghum | nucleus, plastid | 25.16 | 17.47 |
| Os05t0440900-00 | Rice | plastid | 25.16 | 17.32 |
| TraesCS6D01G239400.1 | Wheat | plastid | 32.08 | 17.23 |
| HORVU6Hr1G065900.1 | Barley | mitochondrion, plastid | 32.08 | 17.17 |
| TraesCS6A01G258000.1 | Wheat | plastid | 31.45 | 17.12 |
| Zm00001d017606_P001 | Maize | plastid | 31.45 | 17.12 |
| HORVU4Hr1G083150.1 | Barley | plastid | 27.04 | 17.0 |
| OQU85631 | Sorghum | plastid | 32.7 | 16.88 |
| TraesCS6B01G267100.1 | Wheat | plastid | 30.82 | 16.44 |
| Zm00001d038283_P001 | Maize | nucleus | 23.27 | 16.23 |
| AT2G18500.1 | Thale cress | mitochondrion, plastid | 30.82 | 15.56 |
| AT5G01840.1 | Thale cress | nucleus | 25.79 | 15.19 |
| TraesCS2B01G415000.1 | Wheat | mitochondrion | 33.96 | 14.44 |
| TraesCS2D01G394400.1 | Wheat | mitochondrion | 34.59 | 14.4 |
| TraesCS2A01G396600.1 | Wheat | mitochondrion, plastid | 33.96 | 14.25 |
| Os04t0577700-01 | Rice | nucleus | 32.7 | 14.17 |
| Os03t0126450-00 | Rice | nucleus | 28.93 | 13.65 |
| Zm00001d026061_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 32.7 | 13.58 |
| TraesCS4B01G319700.1 | Wheat | plastid | 25.79 | 13.44 |
| Zm00001d002594_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 33.33 | 13.35 |
| EES11304 | Sorghum | plastid | 33.96 | 13.2 |
| HORVU2Hr1G094240.1 | Barley | cytosol, mitochondrion, plastid | 29.56 | 13.09 |
| AT1G06920.1 | Thale cress | mitochondrion, nucleus, plastid | 25.79 | 13.02 |
| AT5G58360.1 | Thale cress | nucleus | 23.27 | 12.5 |
| AT2G30400.1 | Thale cress | nucleus | 24.53 | 12.19 |
| Os01t0831800-00 | Rice | plastid | 19.5 | 11.19 |
| AT4G18830.1 | Thale cress | mitochondrion, nucleus, plastid | 22.64 | 10.32 |
Protein Annotations
| MapMan:15.5.37 | EntrezGene:824418 | UniProt:A0A178VIE0 | ProteinID:AEE78955.1 | EMBL:AL050300 | ArrayExpress:AT3G52525 |
| EnsemblPlantsGene:AT3G52525 | RefSeq:AT3G52525 | TAIR:AT3G52525 | RefSeq:AT3G52525-TAIR-G | EnsemblPlants:AT3G52525.1 | TAIR:AT3G52525.1 |
| Symbol:ATOFP6 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0045892 | InterPro:IPR006458 | RefSeq:NP_680125.1 | ProteinID:OAP06079.1 | InterPro:Ovate | InterPro:Ovate_C |
| PFAM:PF04844 | PO:PO:0000293 | PFscan:PS51754 | PANTHER:PTHR33057 | PANTHER:PTHR33057:SF17 | UniProt:Q3EAL1 |
| TIGRFAMs:TIGR01568 | UniParc:UPI0000163706 | SEG:seg | : | : | : |
Description
OFP6Transcription repressor OFP6 [Source:UniProtKB/Swiss-Prot;Acc:Q3EAL1]
Coordinates
chr3:+:19474945..19476181
Molecular Weight (calculated)
17909.2 Da
IEP (calculated)
8.869
GRAVY (calculated)
-0.277
Length
159 amino acids
Sequence
(BLAST)
(BLAST)
001: MATKSKKKIL KTVSVVDISC GNCIKPTFAS IFNFFSKKPK RPSSTYRHCH SSISSATPSS TPLATASVAV EKDSDDPYLD FRQSMLQMIL ENQIYSKDEL
101: RELLQCFLSL NSHYHHGIIV RAFSEIWEDV SSAAASAVEA SPLITRHVSR ASRDYYNYY
101: RELLQCFLSL NSHYHHGIIV RAFSEIWEDV SSAAASAVEA SPLITRHVSR ASRDYYNYY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.