Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 1
- nucleus 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G275100.1 | Wheat | plastid | 96.02 | 94.76 |
| TraesCS1A01G275500.1 | Wheat | nucleus, plastid | 94.69 | 93.45 |
| HORVU1Hr1G074020.1 | Barley | nucleus, plastid | 89.38 | 88.99 |
| EES18304 | Sorghum | nucleus, plastid | 61.95 | 61.14 |
| Os05t0440900-00 | Rice | plastid | 62.39 | 61.04 |
| Zm00001d038283_P001 | Maize | nucleus | 57.96 | 57.46 |
| TraesCS3B01G408300.1 | Wheat | plastid | 52.65 | 52.65 |
| GSMUA_Achr6P19470_001 | Banana | nucleus | 34.51 | 41.94 |
| GSMUA_Achr9P02660_001 | Banana | mitochondrion | 30.97 | 35.35 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 32.3 | 32.88 |
| GSMUA_Achr6P18350_001 | Banana | mitochondrion | 30.53 | 31.94 |
| Solyc11g068780.1.1 | Tomato | cytosol | 18.58 | 30.66 |
| Solyc01g007800.2.1 | Tomato | mitochondrion | 23.89 | 29.67 |
| PGSC0003DMT400050511 | Potato | cytosol | 18.14 | 29.5 |
| PGSC0003DMT400042334 | Potato | mitochondrion | 23.89 | 29.35 |
| KRH32810 | Soybean | mitochondrion | 22.57 | 28.81 |
| VIT_08s0007g02550.t01 | Wine grape | mitochondrion, plastid | 23.45 | 28.49 |
| KRH72226 | Soybean | mitochondrion | 21.24 | 27.59 |
| Solyc10g082050.1.1 | Tomato | mitochondrion | 21.68 | 27.53 |
| KRH67981 | Soybean | mitochondrion | 23.01 | 27.37 |
| AT2G36026.1 | Thale cress | nucleus, plastid | 22.12 | 27.32 |
| PGSC0003DMT400072347 | Potato | mitochondrion, plastid | 22.57 | 26.98 |
| KRG96237 | Soybean | mitochondrion | 22.57 | 26.7 |
| AT3G52525.1 | Thale cress | plastid | 18.14 | 25.79 |
| Bra017266.1-P | Field mustard | nucleus | 20.8 | 25.27 |
| CDY43753 | Canola | nucleus | 20.8 | 25.27 |
| CDX75076 | Canola | nucleus | 20.8 | 25.27 |
| Bra005303.1-P | Field mustard | mitochondrion, plastid | 20.35 | 24.73 |
| KRH26670 | Soybean | mitochondrion | 19.03 | 23.12 |
| TraesCS1B01G193300.1 | Wheat | mitochondrion | 24.78 | 22.76 |
| KRH22646 | Soybean | mitochondrion, nucleus | 17.7 | 21.74 |
| KRH25295 | Soybean | nucleus, plastid | 18.58 | 21.54 |
| KRH30374 | Soybean | nucleus, plastid | 18.58 | 21.32 |
| TraesCS3B01G255700.1 | Wheat | nucleus | 23.89 | 16.12 |
| TraesCS4B01G319700.1 | Wheat | plastid | 21.68 | 16.07 |
| TraesCS2B01G410500.1 | Wheat | mitochondrion | 17.26 | 15.41 |
| TraesCS3B01G178800.1 | Wheat | nucleus | 23.89 | 15.25 |
| TraesCS6B01G267100.1 | Wheat | plastid | 19.03 | 14.43 |
| TraesCS2B01G123000.1 | Wheat | nucleus | 17.26 | 14.29 |
| TraesCS4B01G262000.1 | Wheat | mitochondrion | 16.81 | 13.77 |
| TraesCS3B01G377200.1 | Wheat | mitochondrion, nucleus | 20.8 | 12.98 |
| TraesCS2B01G415000.1 | Wheat | mitochondrion | 20.8 | 12.57 |
| TraesCS4B01G168800.1 | Wheat | mitochondrion, nucleus, plastid | 15.04 | 12.36 |
| TraesCS3B01G324100.1 | Wheat | nucleus | 15.49 | 12.03 |
| TraesCS1B01G310200.1 | Wheat | mitochondrion, plastid | 18.14 | 11.48 |
| TraesCS1B01G350500.1 | Wheat | cytosol, mitochondrion, nucleus | 16.81 | 11.01 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G284700.1 | EnsemblPlantsGene:TraesCS1B01G284700 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045892 | InterPro:IPR006458 | InterPro:Ovate | InterPro:Ovate_C | PANTHER:PTHR33057 |
| PANTHER:PTHR33057:SF32 | PFAM:PF04844 | PFscan:PS51754 | SEG:seg | TIGRFAMs:TIGR01568 | MapMan:15.5.37 |
Description
No Description!
Coordinates
chr1B:+:494222311..494222991
Molecular Weight (calculated)
24584.9 Da
IEP (calculated)
8.950
GRAVY (calculated)
-0.546
Length
226 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSPGSFSRR SGDSFLLPRP PPVTDVGCGC RTPRLLSSIY SSLMSRARGG GGRGTKPKSP HASSTSTATA FTSSTAGATT ATTVSSLDDS WGLATYATNT
101: LYEDDPGARR QRRRTGTRRH RRQRNHASSR RPERGVAMMA RGEEEEEEAA VAVEVESATP YEDFRESMVA MVVEKEMYAW EDLNALLHGF LSLNSPRNHP
201: LILHAFADLW APRGGLFCPP SPCLGL
101: LYEDDPGARR QRRRTGTRRH RRQRNHASSR RPERGVAMMA RGEEEEEEAA VAVEVESATP YEDFRESMVA MVVEKEMYAW EDLNALLHGF LSLNSPRNHP
201: LILHAFADLW APRGGLFCPP SPCLGL
001: MATKSKKKIL KTVSVVDISC GNCIKPTFAS IFNFFSKKPK RPSSTYRHCH SSISSATPSS TPLATASVAV EKDSDDPYLD FRQSMLQMIL ENQIYSKDEL
101: RELLQCFLSL NSHYHHGIIV RAFSEIWEDV SSAAASAVEA SPLITRHVSR ASRDYYNYY
101: RELLQCFLSL NSHYHHGIIV RAFSEIWEDV SSAAASAVEA SPLITRHVSR ASRDYYNYY
Arabidopsis Description
OFP6Transcription repressor OFP6 [Source:UniProtKB/Swiss-Prot;Acc:Q3EAL1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.