Factsheet for TraesCS2B01G123000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G105600.1	Wheat	nucleus	87.55	86.59
TraesCS2A01G106000.1	Wheat	nucleus	88.28	86.38
Zm00001d007168_P001	Maize	mitochondrion	44.32	51.93
OQU90474	Sorghum	mitochondrion	49.08	48.38
Zm00001d022446_P001	Maize	nucleus	43.22	47.97
Os07t0679200-01	Rice	nucleus, plastid	54.21	44.85
TraesCS4B01G168800.1	Wheat	mitochondrion, nucleus, plastid	40.66	40.36
TraesCS3B01G324100.1	Wheat	nucleus	21.61	20.27
TraesCS2B01G410500.1	Wheat	mitochondrion	18.68	20.16
TraesCS1B01G350500.1	Wheat	cytosol, mitochondrion, nucleus	25.27	20.0
TraesCS3B01G408300.1	Wheat	plastid	15.38	18.58
TraesCS1B01G284700.1	Wheat	plastid	14.29	17.26
TraesCS3B01G377200.1	Wheat	mitochondrion, nucleus	22.71	17.13
TraesCS1B01G310200.1	Wheat	mitochondrion, plastid	20.51	15.69
TraesCS4B01G262000.1	Wheat	mitochondrion	15.02	14.86
TraesCS1B01G193300.1	Wheat	mitochondrion	12.45	13.82
TraesCS6B01G267100.1	Wheat	plastid	14.29	13.09
TraesCS2B01G415000.1	Wheat	mitochondrion	16.12	11.76
TraesCS4B01G319700.1	Wheat	plastid	12.45	11.15
TraesCS3B01G255700.1	Wheat	nucleus	13.55	11.04
TraesCS3B01G178800.1	Wheat	nucleus	12.09	9.32

Protein Annotations

EnsemblPlants:TraesCS2B01G123000.1	EnsemblPlantsGene:TraesCS2B01G123000	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0045892	InterPro:IPR006458	InterPro:Ovate	InterPro:Ovate_C	PANTHER:PTHR33057
PANTHER:PTHR33057:SF27	PFAM:PF04844	PFscan:PS51754	SEG:seg	TIGRFAMs:TIGR01568	MapMan:15.5.37

Description

No Description!

Coordinates

chr2B:-:90441197..90442159

Molecular Weight (calculated)

29759.8 Da

IEP (calculated)

11.581

GRAVY (calculated)

-0.672

Length

273 amino acids

Sequence
(BLAST)

001: MPPPGSWFYM LRRKRGGDDG EIKRGDRAPA VVTTPASSRG VPVPPPCTPN RASCYVPSGQ RGAVKGIPIP PKRRDTQFPR SPQPSDIVFD VVTVSRAAAD
101: RFDGLRAMPE LKLRPILTKP AGKKVEGEEG ASGSSSASPT ARARRRRRPR LYVKPSGGRM GRRPADAQPP TKTTTGPQKR RARRRRWLQE SLVVVKESAD
201: PEEDFLASMA EMIAANDEVR ASPRGLEELL ACYLALNAAE HHRAIVAAFR RAWLDATATG IKHRPPPSQG LAG

Best Arabidopsis Sequence Match ( AT5G58360.1 )
(BLAST)

001: MKQKMGTHKF RFSDMMPHSW LYKLKGMSRS SRKHHLSSPK HLSSADASSS RKLRDPLRRL SSTAHHPQAS NSPPKSSSFK RKIKRKTVYK PSSRLKLSTS
101: SSLNHRSKSS SSANAISDSA VGSFLDRVSS PSDQNFVHDP EPHSSIDIKD ELSVRKLDDV PEDPSVSPNL SPETAKEPPF EMMTQQKLKK PKAHSSGIKI
201: PTKIVRKKKK ERTSQVSKKK GVVKSFAIVL SSVDPEKDFR ESMVEMIMEN KMREQKDLED LLACYLSLNS SEYHDVIIKA FENTWLHLTQ GLSISL

Arabidopsis Description

OFP3Transcription repressor OFP3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVL4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.