Factsheet for TraesCS4B01G168800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus

Predictor Summary:

plastid 2
mitochondrion 4
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G136100.1	Wheat	mitochondrion	92.73	91.73
HORVU4Hr1G049960.1	Barley	mitochondrion	89.45	87.86
TraesCS4D01G171100.1	Wheat	nucleus, plastid	89.45	80.66
Zm00001d029067_P001	Maize	mitochondrion	56.0	55.2
OQU92638	Sorghum	mitochondrion	57.82	54.08
Os01t0511400-00	Rice	cytosol, extracellular, mitochondrion	10.91	51.72
Os03t0336900-00	Rice	plastid	48.0	43.85
TraesCS2B01G123000.1	Wheat	nucleus	40.36	40.66
TraesCS3B01G324100.1	Wheat	nucleus	24.73	23.37
TraesCS1B01G350500.1	Wheat	cytosol, mitochondrion, nucleus	27.27	21.74
TraesCS2B01G410500.1	Wheat	mitochondrion	18.18	19.76
TraesCS3B01G377200.1	Wheat	mitochondrion, nucleus	24.36	18.51
TraesCS3B01G408300.1	Wheat	plastid	14.55	17.7
TraesCS1B01G310200.1	Wheat	mitochondrion, plastid	21.09	16.25
TraesCS4B01G262000.1	Wheat	mitochondrion	15.27	15.22
TraesCS1B01G284700.1	Wheat	plastid	12.36	15.04
TraesCS1B01G193300.1	Wheat	mitochondrion	11.64	13.01
TraesCS3B01G255700.1	Wheat	nucleus	15.27	12.54
TraesCS6B01G267100.1	Wheat	plastid	13.09	12.08
TraesCS4B01G319700.1	Wheat	plastid	13.09	11.8
TraesCS3B01G178800.1	Wheat	nucleus	13.09	10.17
TraesCS2B01G415000.1	Wheat	mitochondrion	13.82	10.16

Protein Annotations

EnsemblPlants:TraesCS4B01G168800.1	EnsemblPlantsGene:TraesCS4B01G168800	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0045892	InterPro:IPR006458	InterPro:Ovate	InterPro:Ovate_C	PANTHER:PTHR33057
PANTHER:PTHR33057:SF23	PFAM:PF04844	PFscan:PS51754	SEG:seg	TIGRFAMs:TIGR01568	MapMan:15.5.37

Description

No Description!

Coordinates

chr4B:+:369147952..369148779

Molecular Weight (calculated)

29928.3 Da

IEP (calculated)

10.988

GRAVY (calculated)

-0.691

Length

275 amino acids

Sequence
(BLAST)

001: MPASSWFHKL RGRSTRKAKR SPACPPSPTR GSSAAASPEC TDQQTSQQRR PPALPPAACA GYSPNRASYY FPSADRGALR CIAPRGADDD DGAALDVRVD
101: VIHSRAGRLG GIDAPPATPE LNLRRIVTRP AAKNDPAEGV AVGSSAGTPT SAATTPTTCR ARGFHVKPAG RRRRRGHDDK SARKEKTAED AGSRRRRWLY
201: ESLVVVKTSS DPERDMAESM AEMVAANRIR SSEDLEELLA CYLALNAAEH HRAVVAAFRR VWLHIAGQRM RHLRH

Best Arabidopsis Sequence Match ( AT5G58360.1 )
(BLAST)

001: MKQKMGTHKF RFSDMMPHSW LYKLKGMSRS SRKHHLSSPK HLSSADASSS RKLRDPLRRL SSTAHHPQAS NSPPKSSSFK RKIKRKTVYK PSSRLKLSTS
101: SSLNHRSKSS SSANAISDSA VGSFLDRVSS PSDQNFVHDP EPHSSIDIKD ELSVRKLDDV PEDPSVSPNL SPETAKEPPF EMMTQQKLKK PKAHSSGIKI
201: PTKIVRKKKK ERTSQVSKKK GVVKSFAIVL SSVDPEKDFR ESMVEMIMEN KMREQKDLED LLACYLSLNS SEYHDVIIKA FENTWLHLTQ GLSISL

Arabidopsis Description

OFP3Transcription repressor OFP3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVL4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.