Factsheet for HORVU4Hr1G049960.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 4
plastid 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G136100.1	Wheat	mitochondrion	90.71	91.37
TraesCS4B01G168800.1	Wheat	mitochondrion, nucleus, plastid	87.86	89.45
TraesCS4D01G171100.1	Wheat	nucleus, plastid	87.5	80.33
Zm00001d029067_P001	Maize	mitochondrion	56.43	56.63
OQU92638	Sorghum	mitochondrion	57.86	55.1
Os01t0511400-00	Rice	cytosol, extracellular, mitochondrion	10.36	50.0
Os03t0336900-00	Rice	plastid	46.79	43.52
HORVU3Hr1G071640.1	Barley	nucleus	23.93	23.18
HORVU1Hr1G076490.1	Barley	nucleus	25.0	19.72
HORVU2Hr1G093380.1	Barley	mitochondrion	17.14	18.82
HORVU3Hr1G083700.1	Barley	plastid	13.93	17.41
HORVU3Hr1G081260.2	Barley	mitochondrion	22.5	16.07
HORVU1Hr1G069900.1	Barley	endoplasmic reticulum, mitochondrion, nucleus, plastid	22.14	14.73
HORVU4Hr1G083150.1	Barley	plastid	12.86	14.23
HORVU1Hr1G049440.1	Barley	mitochondrion	11.43	12.85
HORVU4Hr1G070860.1	Barley	cytosol, mitochondrion	15.36	12.8
HORVU3Hr1G055980.1	Barley	nucleus	15.36	12.8
HORVU1Hr1G074020.1	Barley	nucleus, plastid	10.36	12.78
HORVU6Hr1G065900.1	Barley	mitochondrion, plastid	12.86	12.12
HORVU3Hr1G030870.1	Barley	nucleus	12.86	10.06
HORVU2Hr1G094240.1	Barley	cytosol, mitochondrion, plastid	12.86	10.03

Protein Annotations

EnsemblPlants:HORVU4Hr1G049960.1	EnsemblPlantsGene:HORVU4Hr1G049960	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0045892	InterPro:IPR006458	InterPro:Ovate	InterPro:Ovate_C	PANTHER:PTHR33057
PANTHER:PTHR33057:SF23	PFAM:PF04844	PFscan:PS51754	SEG:seg	TIGRFAMs:TIGR01568	UniParc:UPI000296E621
UniProt:M0V4K5	MapMan:15.5.37	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:406531288..406532606

Molecular Weight (calculated)

30531.1 Da

IEP (calculated)

11.418

GRAVY (calculated)

-0.615

Length

280 amino acids

Sequence
(BLAST)

001: MPASSWFHKL RGRSRGKGKR SAACPSPTRG SSADAIAFIA ASAEWTGRQT SQHCRPPARP PAACAGYSPN RASYYFPSAD RGALRCIAPR GAATDDGAAL
101: DVRVDVIHRR ASRLGGINAP PATPELNLRR IVTRPAGKND PAESVAISSS ASTPTSAATT PSTCRARGFH VKPASRRRRR GHDDKSARKE KAAEDAGSRR
201: RRWLYDSLVV VKTSSDPERE MAESMAEMVA ANHIRSSEDL EELLTCYLAL NAAEHHRAVV AAFRRVWLHI AGQRMRHLRH

Best Arabidopsis Sequence Match ( AT5G58360.1 )
(BLAST)

001: MKQKMGTHKF RFSDMMPHSW LYKLKGMSRS SRKHHLSSPK HLSSADASSS RKLRDPLRRL SSTAHHPQAS NSPPKSSSFK RKIKRKTVYK PSSRLKLSTS
101: SSLNHRSKSS SSANAISDSA VGSFLDRVSS PSDQNFVHDP EPHSSIDIKD ELSVRKLDDV PEDPSVSPNL SPETAKEPPF EMMTQQKLKK PKAHSSGIKI
201: PTKIVRKKKK ERTSQVSKKK GVVKSFAIVL SSVDPEKDFR ESMVEMIMEN KMREQKDLED LLACYLSLNS SEYHDVIIKA FENTWLHLTQ GLSISL

Arabidopsis Description

OFP3Transcription repressor OFP3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVL4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.