Factsheet for Solyc11g068780.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
extracellular 1
cytosol 2
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400050511	Potato	cytosol	91.24	89.93
Solyc10g082050.1.1	Tomato	mitochondrion	47.45	36.52
KRH26670	Soybean	mitochondrion	47.45	34.95
KRH22646	Soybean	mitochondrion, nucleus	46.72	34.78
Solyc01g007800.2.1	Tomato	mitochondrion	45.99	34.62
KRH30374	Soybean	nucleus, plastid	46.72	32.49
KRH25295	Soybean	nucleus, plastid	45.99	32.31
GSMUA_Achr9P02660_001	Banana	mitochondrion	35.04	24.24
GSMUA_Achr6P19470_001	Banana	nucleus	32.85	24.19
GSMUA_Achr5P20250_001	Banana	plastid	35.77	23.67
GSMUA_Achr1P03740_001	Banana	plastid	29.2	22.99
TraesCS1D01G191500.1	Wheat	mitochondrion	40.15	22.36
TraesCS1B01G193300.1	Wheat	mitochondrion	40.15	22.36
GSMUA_Achr6P18350_001	Banana	mitochondrion	35.04	22.22
GSMUA_Achr11P...	Banana	plastid	27.74	22.09
GSMUA_AchrUn_...	Banana	mitochondrion	35.77	22.07
TraesCS1A01G185400.1	Wheat	mitochondrion	39.42	21.95
HORVU1Hr1G049440.1	Barley	mitochondrion	39.42	21.69
Zm00001d029718_P001	Maize	mitochondrion	40.88	21.54
Os01t0864000-01	Rice	mitochondrion, plastid	35.77	21.49
TraesCS3A01G376000.1	Wheat	plastid	35.04	21.43
HORVU3Hr1G083700.1	Barley	plastid	35.04	21.43
TraesCS3B01G408300.1	Wheat	plastid	35.04	21.24
EES03931	Sorghum	plastid	36.5	21.19
TraesCS3D01G368500.1	Wheat	plastid	35.04	21.15
Zm00001d042752_P001	Maize	nucleus, plastid	37.23	20.73
Zm00001d012282_P001	Maize	nucleus, plastid	37.23	20.65
Os10t0532600-01	Rice	mitochondrion	39.42	20.53
GSMUA_Achr8P12190_001	Banana	plastid	29.2	20.41
EER94592	Sorghum	mitochondrion	40.15	19.5
Zm00001d047346_P001	Maize	mitochondrion	38.69	19.27
EES18304	Sorghum	nucleus, plastid	32.12	19.21
TraesCS1A01G275500.1	Wheat	nucleus, plastid	31.39	18.78
TraesCS1B01G284700.1	Wheat	plastid	30.66	18.58
Os02t0679700-01	Rice	plastid	37.96	18.51
TraesCS1D01G275100.1	Wheat	plastid	30.66	18.34
HORVU1Hr1G074020.1	Barley	nucleus, plastid	29.93	18.06
Zm00001d038283_P001	Maize	nucleus	29.93	17.98
Os05t0440900-00	Rice	plastid	29.93	17.75
TraesCS4D01G316300.1	Wheat	nucleus, plastid	29.2	17.7
EER92948	Sorghum	plastid	32.85	17.65
Zm00001d017606_P001	Maize	plastid	37.23	17.47
Solyc04g080210.1.1	Tomato	mitochondrion	33.58	17.29
OQU85631	Sorghum	plastid	38.69	17.21
TraesCS5A01G492400.1	Wheat	nucleus	29.2	17.17
Zm00001d027453_P001	Maize	plastid	29.93	16.6
TraesCS6A01G258000.1	Wheat	plastid	34.31	16.1
Solyc09g018200.1.1	Tomato	nucleus	29.2	15.94
TraesCS6D01G239400.1	Wheat	plastid	34.31	15.88
HORVU6Hr1G065900.1	Barley	mitochondrion, plastid	34.31	15.82
HORVU4Hr1G083150.1	Barley	plastid	29.2	15.81
TraesCS6B01G267100.1	Wheat	plastid	34.31	15.77
TraesCS2B01G415000.1	Wheat	mitochondrion	38.69	14.17
Os04t0577700-01	Rice	nucleus	37.96	14.17
Solyc10g076180.1.1	Tomato	nucleus	32.85	14.02
TraesCS2D01G394400.1	Wheat	mitochondrion	38.69	13.87
TraesCS2A01G396600.1	Wheat	mitochondrion, plastid	37.96	13.72
Zm00001d026061_P001	Maize	cytosol, mitochondrion, nucleus, plastid	36.5	13.05
EES11304	Sorghum	plastid	38.69	12.96
Zm00001d002594_P001	Maize	cytosol, mitochondrion, nucleus, plastid	37.23	12.85
TraesCS4B01G319700.1	Wheat	plastid	28.47	12.79
Os03t0126450-00	Rice	nucleus	31.39	12.76
HORVU2Hr1G094240.1	Barley	cytosol, mitochondrion, plastid	31.39	11.98
Solyc06g082460.1.1	Tomato	nucleus	29.2	11.4
Os01t0831800-00	Rice	plastid	21.9	10.83
Solyc03g034100.2.1	Tomato	mitochondrion	29.2	10.23
Solyc02g072030.1.1	Tomato	mitochondrion, nucleus, plastid	26.28	9.55
Solyc08g068170.1.1	Tomato	plastid	33.58	9.13
Solyc02g085500.2.1	Tomato	mitochondrion	9.49	4.68

Protein Annotations

EnsemblPlants:Solyc11g068780.1.1	EnsemblPlantsGene:Solyc11g068780.1	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0045892	InterPro:IPR006458	InterPro:Ovate	InterPro:Ovate_C	PANTHER:PTHR33057
PANTHER:PTHR33057:SF17	PFAM:PF04844	PFscan:PS51257	PFscan:PS51754	SEG:seg	TIGRFAMs:TIGR01568
UniParc:UPI000276A616	UniProt:K4DA35	MapMan:15.5.37	:	:	:

Description

No Description!

Coordinates

chr11:-:53412570..53412983

Molecular Weight (calculated)

15231.1 Da

IEP (calculated)

6.762

GRAVY (calculated)

-0.543

Length

137 amino acids

Sequence
(BLAST)

001: MSSKNKKIWN CITSNGTAGC GCSKPKLSEI IQPKPKPRPE PEPNAHSSST SNSDSPSPTI MPAKIVGSVA VVKDSDDPFG DFRRSMLQMI MEKEIYSYDD
101: LNELLNCFLQ LNSPSHHDII LQAFMEIWNN GKNYIAN

Best Arabidopsis Sequence Match ( AT3G52525.1 )
(BLAST)

001: MATKSKKKIL KTVSVVDISC GNCIKPTFAS IFNFFSKKPK RPSSTYRHCH SSISSATPSS TPLATASVAV EKDSDDPYLD FRQSMLQMIL ENQIYSKDEL
101: RELLQCFLSL NSHYHHGIIV RAFSEIWEDV SSAAASAVEA SPLITRHVSR ASRDYYNYY

Arabidopsis Description

OFP6Transcription repressor OFP6 [Source:UniProtKB/Swiss-Prot;Acc:Q3EAL1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.