Factsheet for HORVU4Hr1G003750.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 2
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G025400.1	Wheat	nucleus	85.67	78.55
TraesCS4A01G289500.1	Wheat	nucleus	84.21	77.42
TraesCS4D01G022500.1	Wheat	nucleus	83.92	76.94
KXG37846	Sorghum	nucleus	52.92	50.84
Zm00001d033379_P001	Maize	nucleus	51.46	49.72
Os03t0680700-00	Rice	nucleus	50.0	49.42
CDX73171	Canola	nucleus	29.24	34.6
CDY47523	Canola	nucleus	28.95	34.26
Bra015844.1-P	Field mustard	nucleus	28.66	33.91
AT1G75430.1	Thale cress	nucleus	27.49	32.41
HORVU3Hr1G072010.1	Barley	mitochondrion	11.11	29.69
Solyc04g080780.2.1	Tomato	nucleus	29.24	25.0
GSMUA_Achr5P03130_001	Banana	cytosol	24.27	24.85
VIT_18s0001g13130.t01	Wine grape	nucleus	33.92	24.68
KRH61118	Soybean	nucleus	31.58	24.55
PGSC0003DMT400009609	Potato	nucleus	29.82	24.11
KRH51793	Soybean	nucleus	31.29	23.94
HORVU4Hr1G074250.1	Barley	nucleus	33.33	19.35
HORVU4Hr1G020710.1	Barley	nucleus	28.66	18.85
HORVU4Hr1G003800.7	Barley	nucleus	33.63	17.86
HORVU5Hr1G001090.1	Barley	nucleus	32.75	17.26
HORVU1Hr1G049760.1	Barley	nucleus	26.9	15.44
HORVU4Hr1G084590.2	Barley	nucleus	27.49	15.11
HORVU4Hr1G010430.6	Barley	nucleus	31.29	13.23
HORVU7Hr1G088090.4	Barley	nucleus	18.71	11.55
HORVU1Hr1G072850.1	Barley	nucleus, plastid	25.73	11.08
HORVU3Hr1G085720.1	Barley	nucleus, plastid	23.68	10.76

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.5	UniProt:A0A287MZ36	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU4Hr1G003750
EnsemblPlants:HORVU4Hr1G003750.1	InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356	PFAM:PF05920
PFAM:PF07526	InterPro:POX_dom	PFscan:PS50071	PANTHER:PTHR11850	PANTHER:PTHR11850:SF128	SMART:SM00389
SMART:SM00574	SUPFAM:SSF46689	UniParc:UPI000B48253E	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr4H:+:8208603..8210329

Molecular Weight (calculated)

37499.9 Da

IEP (calculated)

5.339

GRAVY (calculated)

-0.556

Length

342 amino acids

Sequence
(BLAST)

001: MVTKRLQESG SPKQARPVAT DSANGPLMLL HLREQRCGHH PAASPAGPLA LTLGAPADDD ACRRCDEALR GSRYLRPAME LLRDAVSAVG GGGDDDESAG
101: GGSEDEATHR DMRLRAAATG RRVIQAKNDG GTGGAVQAKL LGLLSELESR QEHYFQELSR VASSFEPVLG AAATAGYTSL MSRAMTRHFG NLRRAILRKL
201: ATLWVVDEDS EEEEEDGDEY DYDPARRQED MVGRLVRRTK QAAAARAAEQ VCKPMRVLPE ESVAVLRAWL FNHFLDPYPS DNEKLRLAVS TGLSRRQISN
301: WFINARVRLW KPMIEEMYAD EFSEDSSAVS SRDDGDAAAS SQ

Best Arabidopsis Sequence Match ( AT1G75410.1 )
(BLAST)

001: MAVYYPNSVG MQSLYQESIY LNEQQQQQQQ ASSSSAASFS EIVSGDVRNN EMVFIPPTSD VAVNGNVTVS SNDLSFHGGG LSLSLGNQIQ SAVSVSPFQY
101: HYQNLSNQLS YNNLNPSTMS DENGKSLSVH QHHSDQILPS SVYNNNGNNG VGFYNNYRYE TSGFVSSVLR SRYLKPTQQL LDEVVSVRKD LKLGNKKMKN
201: DKGQDFHNGS SDNITEDDKS QSQELSPSER QELQSKKSKL LTMVDEVDKR YNQYHHQMEA LASSFEMVTG LGAAKPYTSV ALNRISRHFR CLRDAIKEQI
301: QVIRGKLGER ETSDEQGERI PRLRYLDQRL RQQRALHQQL GMVRPAWRPQ RGLPENSVSI LRAWLFEHFL HPYPKESEKI MLSKQTGLSK NQVANWFINA
401: RVRLWKPMIE EMYKEEFGES AELLSNSNQD TKKMQETSQL KHEDSSSSQQ QNQGNNNNNI PYTSDAEQNL VFADPKPDRA TTGDYDSLMN YHGFGIDDYN
501: RYVGLGNQQD GRYSNPHQLH DFVV

Arabidopsis Description

BLH3BEL1-like homeodomain protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWS9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.