CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH72182	Soybean	nucleus	94.25	93.83
KRG96259	Soybean	nucleus	76.7	74.56
KRH68008	Soybean	nucleus	76.55	74.52
VIT_08s0105g00230.t01	Wine grape	nucleus	58.4	61.86
KRH26689	Soybean	nucleus	46.14	58.99
CDY32069	Canola	nucleus	54.01	56.13
PGSC0003DMT400054945	Potato	nucleus	59.46	55.82
CDY40420	Canola	nucleus	53.1	55.54
Solyc01g007070.2.1	Tomato	nucleus	58.4	55.14
Bra017277.1-P	Field mustard	nucleus	56.28	55.11
CDX84585	Canola	nucleus	55.22	54.4
AT2G35940.3	Thale cress	nucleus	55.22	53.68
CDX84171	Canola	nucleus	47.5	53.4
CDX79646	Canola	nucleus	55.22	52.82
CDX75085	Canola	nucleus	49.62	52.23
Bra005310.1-P	Field mustard	nucleus	49.47	52.07
KRH22635	Soybean	nucleus	54.77	51.57
Bra023045.1-P	Field mustard	nucleus	50.38	51.0
Os11t0158600-00	Rice	nucleus	29.95	47.14
KRH25319	Soybean	nucleus	50.98	45.48
KRG88864	Soybean	nucleus	51.44	44.5
TraesCS4A01G200800.1	Wheat	nucleus	43.42	43.22
Zm00001d053151_P003	Maize	nucleus	43.87	43.22
TraesCS4D01G111900.1	Wheat	nucleus	43.12	42.92
TraesCS4B01G114600.1	Wheat	nucleus	42.97	42.9
EES09309	Sorghum	nucleus	44.02	42.17
HORVU4Hr1G020710.1	Barley	nucleus	32.07	40.77
GSMUA_Achr2P06410_001	Banana	nucleus	8.77	40.0
Os11t0158832-00	Rice	nucleus	14.98	37.64
KRH61118	Soybean	nucleus	24.51	36.82
KRH51793	Soybean	nucleus	24.21	35.79
KRH51485	Soybean	nucleus	29.2	34.71
KRH60794	Soybean	nucleus	34.49	34.44
KRH05875	Soybean	nucleus	30.11	32.57
KRH51792	Soybean	nucleus	31.16	32.34
KRH61114	Soybean	nucleus	31.16	31.89
KRH15136	Soybean	nucleus	30.56	31.76
KRH77572	Soybean	nucleus	29.35	30.03
KRH00065	Soybean	nucleus	26.02	30.02
KRH27902	Soybean	nucleus	29.05	29.91
KRH41225	Soybean	nucleus	28.29	28.95
KRH59951	Soybean	nucleus	27.69	28.82
KRH28575	Soybean	nucleus	29.65	27.8
KRH75724	Soybean	nucleus	25.57	27.75
KRH65931	Soybean	nucleus	25.87	27.71
KRH76894	Soybean	nucleus	29.65	27.61
KRH69971	Soybean	nucleus	26.48	25.96
KRH08329	Soybean	nucleus	30.26	25.74
KRH52190	Soybean	nucleus	19.67	23.68
KRH25064	Soybean	nucleus	26.93	23.42
KRH30618	Soybean	nucleus	26.17	22.53
KRH26495	Soybean	nucleus	25.87	21.54
KRH61499	Soybean	nucleus	18.61	21.39
KRH22860	Soybean	nucleus	25.42	21.37
KRH05496	Soybean	nucleus	18.31	21.19

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100791773	MapMan:15.5.3.5	UniProt:A0A0K2CTJ9	EMBL:ACUP02006182	ncoils:Coil
EnsemblPlantsGene:GLYMA_10G081700	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom
UniProt:I1L9K6	InterPro:IPR001356	ProteinID:KRH32853.1	EnsemblPlants:KRH32854	ProteinID:KRH32854	ProteinID:KRH32854.1
EMBL:KT031167	PFAM:PF05920	PFAM:PF07526	InterPro:POX_dom	PFscan:PS50071	PANTHER:PTHR11850
PANTHER:PTHR11850:SF135	SMART:SM00389	SMART:SM00574	SUPFAM:SSF46689	UniParc:UPI000233D4FE	SEG:seg

Description

hypothetical protein

Coordinates

chr10:+:9752508..9758422

Molecular Weight (calculated)

72534.1 Da

IEP (calculated)

7.937

GRAVY (calculated)

-0.622

Length

661 amino acids

Sequence
(BLAST)

001: MATYFHSNSE IQAGADGLQT LVLMNPGYVQ YSDTPPPPHG GNLVFLNSAA GNASLQSLPH APPPHTQQFV GVPLSAAAHE PPASMHHDVS ALHGFLPRMQ
101: YNLWNTIEHN AAAREAPRAT QGLSLSLHGD HMRASPSSAS GASNGGGVAG IQSVLLSSKY LKATQELLDE VVNVNGGIRV EHAKKLNFEK TKVVGESSTA
201: ASGDGSVGGE GSGKRSSELS TTERQEIQIK KAKLINMLDE VEQRYRQYHN QMKIVISSFE QAAGIGSART YTALALQTIS KQFRCLKDAI TGQIRAANKS
301: LGEEDCFGAK IEGSRLKYVD HHLRQQRAIQ QLGMIHHNAW RPQRGLPERS VSVLRAWLFE HFLHPYPKDS DKHMLAKQTG LTRSQVSNWF INARVRLWKP
401: MVEEMYLEEM KEHELNGSEE KSSKSGEDPA TKTTSPQEKR TSSEIESKSF NSKQDVSKQS QNTPILPTSP PSISPIGGSV KNQSGFSFMG SSELDGITQG
501: SPKKPRNHEI LHSPNRVPSI NMDVKANEAN NEQQLSMDHE RQNNRDSYSF MGNQTNFISG FGQYPIEEIG RFDAEQFTPR FSGKNGVSLT LGLPHCDTLS
601: GTHQSFLPNQ NIQLGRGLDI GEPNQFGALN NSNSHNSAAF ESINMQNPKR FAAQLLPDFV A

Best Arabidopsis Sequence Match ( AT2G35940.3 )
(BLAST)

001: MAAYFHGNPP EISAGSDGGL QTLILMNPTT YVQYTQQDND SNNNNNSNNS NNNNTNTNTN NNNSSFVFLD SHAPQPNASQ QFVGIPLSGH EAASITAADN
101: ISVLHGYPPR VQYSLYGSHQ VDPTHQQAAC ETPRAQQGLS LTLSSQQQQQ QQHHQQHQPI HVGFGSGHGE DIRVGSGSTG SGVTNGIANL VSSKYLKAAQ
201: ELLDEVVNAD SDDMNAKSQL FSSKKGSCGN DKPVGESSAG AGGEGSGGGA EAAGKRPVEL GTAERQEIQM KKAKLSNMLH EVEQRYRQYH QQMQMVISSF
301: EQAAGIGSAK SYTSLALKTI SRQFRCLKEA IAGQIKAANK SLGEEDSVSG VGRFEGSRLK FVDHHLRQQR ALQQLGMIQH PSNNAWRPQR GLPERAVSVL
401: RAWLFEHFLH PYPKDSDKHM LAKQTGLTRS QVSNWFINAR VRLWKPMVEE MYMEEMKEQA KNMGSMEKTP LDQSNEDSAS KSTSNQEKSP MADTNYHMNP
501: NHNGDLEGVT GMQGSPKRLR TSDETMMQPI NADFSSNEKL TMKILEERQG IRSDGGYPFM GNFGQYQMDE MSRFDVVSDQ ELMAQRYSGN NNGVSLTLGL
601: PHCDSLSSTH HQGFMQTHHG IPIGRRVKIG ETEEYGPATI NGGSSTTTAH SSAAAAAAYN GMNIQNQKRY VAQLLPDFVA

Arabidopsis Description

BLH1BEL1-like homeodomain protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ56]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.