CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH25319	Soybean	nucleus	88.61	91.36
KRH26689	Soybean	nucleus	50.65	74.85
KRH22635	Soybean	nucleus	64.14	69.8
VIT_06s0009g00410.t01	Wine grape	nucleus	52.23	54.81
KRH72182	Soybean	nucleus	45.81	52.71
KRH32854	Soybean	nucleus	44.5	51.44
KRH68008	Soybean	nucleus	45.55	51.25
KRG96259	Soybean	nucleus	45.42	51.03
PGSC0003DMT400015183	Potato	nucleus	42.41	47.37
PGSC0003DMT400050527	Potato	nucleus	43.59	47.17
Solyc06g074120.2.1	Tomato	nucleus	42.93	46.92
Solyc11g068950.1.1	Tomato	nucleus	39.92	46.14
Os11t0158600-00	Rice	nucleus	24.74	45.0
TraesCS4D01G111900.1	Wheat	nucleus	37.04	42.62
TraesCS4B01G114600.1	Wheat	nucleus	36.91	42.6
TraesCS4A01G200800.1	Wheat	nucleus	36.78	42.32
Zm00001d053151_P003	Maize	nucleus	36.52	41.58
HORVU4Hr1G020710.1	Barley	nucleus	28.01	41.15
EES09309	Sorghum	nucleus	36.39	40.29
Os11t0158832-00	Rice	nucleus	12.3	35.74
AT2G27220.2	Thale cress	nucleus	20.68	35.19
KRH51485	Soybean	nucleus	25.39	34.89
KRH61118	Soybean	nucleus	19.9	34.55
KRH51793	Soybean	nucleus	20.03	34.23
Bra034335.1-P	Field mustard	nucleus	19.9	33.93
CDY30566	Canola	nucleus	19.9	33.93
CDX77099	Canola	nucleus	19.9	33.85
KRH60794	Soybean	nucleus	28.66	33.08
KRH15136	Soybean	nucleus	26.57	31.92
KRH05875	Soybean	nucleus	25.13	31.42
KRH51792	Soybean	nucleus	25.79	30.93
KRH61114	Soybean	nucleus	26.05	30.8
KRH00065	Soybean	nucleus	22.77	30.37
KRH27902	Soybean	nucleus	24.87	29.59
KRH77572	Soybean	nucleus	24.87	29.41
KRH75724	Soybean	nucleus	23.43	29.39
KRH65931	Soybean	nucleus	23.04	28.53
KRH59951	Soybean	nucleus	23.56	28.35
KRH41225	Soybean	nucleus	23.3	27.55
KRH28575	Soybean	nucleus	24.87	26.95
KRH76894	Soybean	nucleus	25.0	26.9
KRH69971	Soybean	nucleus	23.17	26.26
KRH08329	Soybean	nucleus	25.79	25.35
KRH52190	Soybean	nucleus	17.28	24.04
KRH25064	Soybean	nucleus	23.43	23.55
KRH30618	Soybean	nucleus	23.56	23.44
KRH61499	Soybean	nucleus	17.02	22.61
KRH22860	Soybean	nucleus	22.25	21.63
KRH26495	Soybean	nucleus	22.25	21.41
KRH05496	Soybean	nucleus	15.97	21.37

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100812360	MapMan:15.5.3.5	ncoils:Coil	EnsemblPlantsGene:GLYMA_U009200	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356	UniProt:K7LQ34
EnsemblPlants:KRG88864	ProteinID:KRG88864	ProteinID:KRG88864.1	ProteinID:KRG88865.1	PFAM:PF05920	PFAM:PF07526
InterPro:POX_dom	PFscan:PS50071	PANTHER:PTHR11850	PANTHER:PTHR11850:SF135	SMART:SM00389	SMART:SM00574
SUPFAM:SSF46689	UniParc:UPI000233CCED	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chrscaffold_21:+:27009..32583

Molecular Weight (calculated)

83699.1 Da

IEP (calculated)

7.641

GRAVY (calculated)

-0.719

Length

764 amino acids

Sequence
(BLAST)

001: MATYFHGSTS ETPSSAEGLQ TLYLMNPNYV VPYSDAAQHP TQNMLLVNPN NNTSNTSSTS TNALNLGNFS HAPPPPSPNN NREHHHHHLT GVTIPSSNFL
101: LSNAAADPAR SSFLGQHEFS GFHSSAAATT STAAASRGNN YNLWGSIFDQ SASNIMTSTT HTPSSNMGCV IGHSTQIGFH RPNHLSLSLS SQQTPYSSLS
201: GETHAISLAN RGGGGDDMRG MHNGVSSMHS VSLGSKYLKA TQELLDEVVN VGKGIFKGEE SMEGDKKEKM KGNIESSSWV GDGSSCGGGE NNNNNDGGKQ
301: GVELSTAQRQ ELQMKKSKLV TMLDEVEQRY RQYHHQMQVV ITSFEQAAGV GAAKSYTALA LKTISKQFRC LKDAISSQIK TTSKTLGEDD CLGVKVEGSR
401: LRYVDHQLRQ QRALQQLGMI QHNAWRPQRG LPERAVSVLR AWLFEHFLHP YPKDSDKVML AKQTGLTRSQ VSNWFINARV RLWKPMVEEM YLEEVKQEPN
501: NSSQDNTTKR SKESSKELWS EANATAQESG AMRLDHINIL QSKAESFNNN NNNQTTSPTE ISNNSHNSLQ SAGFHLADMQ SPNKPIRSTS EMQNSPGSIL
601: SVDMEMKPRH HGETNNNTII TREGNNNTTK FGIESHGGGG GGFGAFPNME DIGRFHHHHH HVTDQQSLAP RFHGNGVSLT LGLPHSTENN NNLSLSGTTH
701: QHGFLSQNMH LGMRSTTNNA NNEFCGAINT TPPSNSHSGT SYESIDIIQN RKRFAAQLLR DFVA

Best Arabidopsis Sequence Match ( AT1G75410.1 )
(BLAST)

001: MAVYYPNSVG MQSLYQESIY LNEQQQQQQQ ASSSSAASFS EIVSGDVRNN EMVFIPPTSD VAVNGNVTVS SNDLSFHGGG LSLSLGNQIQ SAVSVSPFQY
101: HYQNLSNQLS YNNLNPSTMS DENGKSLSVH QHHSDQILPS SVYNNNGNNG VGFYNNYRYE TSGFVSSVLR SRYLKPTQQL LDEVVSVRKD LKLGNKKMKN
201: DKGQDFHNGS SDNITEDDKS QSQELSPSER QELQSKKSKL LTMVDEVDKR YNQYHHQMEA LASSFEMVTG LGAAKPYTSV ALNRISRHFR CLRDAIKEQI
301: QVIRGKLGER ETSDEQGERI PRLRYLDQRL RQQRALHQQL GMVRPAWRPQ RGLPENSVSI LRAWLFEHFL HPYPKESEKI MLSKQTGLSK NQVANWFINA
401: RVRLWKPMIE EMYKEEFGES AELLSNSNQD TKKMQETSQL KHEDSSSSQQ QNQGNNNNNI PYTSDAEQNL VFADPKPDRA TTGDYDSLMN YHGFGIDDYN
501: RYVGLGNQQD GRYSNPHQLH DFVV

Arabidopsis Description

BLH3BEL1-like homeodomain protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWS9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.