Factsheet for VIT_08s0105g00230.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH72182	Soybean	nucleus	62.98	59.19
KRH32854	Soybean	nucleus	61.86	58.4
KRG96259	Soybean	nucleus	62.98	57.79
KRH68008	Soybean	nucleus	62.5	57.44
VIT_06s0009g00410.t01	Wine grape	nucleus	58.81	50.41
PGSC0003DMT400054945	Potato	nucleus	55.13	48.86
Solyc01g007070.2.1	Tomato	nucleus	54.81	48.86
CDY32069	Canola	nucleus	49.68	48.74
CDY40420	Canola	nucleus	49.36	48.73
Os11t0158600-00	Rice	nucleus	31.89	47.38
CDX84171	Canola	nucleus	44.55	47.28
CDX84585	Canola	nucleus	50.8	47.24
AT2G35940.3	Thale cress	nucleus	50.8	46.62
Bra017277.1-P	Field mustard	nucleus	50.0	46.22
CDX79646	Canola	nucleus	50.8	45.88
CDX75085	Canola	nucleus	44.87	44.59
Bra005310.1-P	Field mustard	nucleus	44.87	44.59
Bra023045.1-P	Field mustard	nucleus	45.03	43.03
GSMUA_Achr2P06410_001	Banana	nucleus	9.13	39.31
Zm00001d053151_P003	Maize	nucleus	40.22	37.41
TraesCS4B01G114600.1	Wheat	nucleus	39.58	37.31
VIT_18s0001g11800.t01	Wine grape	nucleus	20.83	37.25
TraesCS4A01G200800.1	Wheat	nucleus	39.42	37.05
TraesCS4D01G111900.1	Wheat	nucleus	39.26	36.9
EES09309	Sorghum	nucleus	40.38	36.52
VIT_03s0038g00050.t01	Wine grape	nucleus	38.3	34.59
HORVU4Hr1G020710.1	Barley	nucleus	27.72	33.27
VIT_18s0001g13130.t01	Wine grape	nucleus	23.56	31.28
VIT_18s0001g13150.t01	Wine grape	nucleus	33.33	29.8
VIT_02s0025g00200.t01	Wine grape	nucleus	28.53	27.55
VIT_13s0019g02450.t01	Wine grape	nucleus	21.63	27.11
VIT_08s0007g01290.t01	Wine grape	nucleus	25.16	24.45
VIT_04s0023g01020.t01	Wine grape	nucleus	29.17	21.51
Os11t0158832-00	Rice	nucleus	8.97	21.29
VIT_06s0004g02580.t01	Wine grape	nucleus	24.52	20.4
VIT_04s0008g00880.t01	Wine grape	nucleus	18.91	20.03

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.5	ProteinID:CCB47914	ProteinID:CCB47914.1	ncoils:Coil	UniProt:F6H6S8
EMBL:FN595245	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom
InterPro:IPR001356	PFAM:PF05920	PFAM:PF07526	InterPro:POX_dom	PFscan:PS50071	PANTHER:PTHR11850
PANTHER:PTHR11850:SF135	SMART:SM00389	SMART:SM00574	SUPFAM:SSF46689	UniParc:UPI0002108A00	ArrayExpress:VIT_08s0105g00230
EnsemblPlantsGene:VIT_08s0105g00230	EnsemblPlants:VIT_08s0105g00230.t01	unigene:Vvi.24796	SEG:seg	:	:

Description

No Description!

Coordinates

chr8:-:7221935..7226534

Molecular Weight (calculated)

68547.8 Da

IEP (calculated)

7.570

GRAVY (calculated)

-0.631

Length

624 amino acids

Sequence
(BLAST)

001: MGFVSLADDD EARAHSDFHH TRICLIRPLQ LLLHNSEPVD SGSKWVDSHT QIYHSSDINS KKEEILFKID GDSSIRSLPK PLFATTAGLC DDMRISGASS
101: SSASGISNGV SGMHGVILSS KYLKAAQQLL DEVVNVGNGI KTETPSKKSS SEATKTLGEG LIGGETSTKR SADLSTAERQ EIQMKKAKLL NMLDEVEQRY
201: RQYHHQMQIV ISSFEQAAGI GSAKTYTALA LQTISKQFRC LKDAISGQIR AANKSLGEED GTGGKIEGSR LKFVDHQLRQ QRALQQLGMI QQNVWRPQRG
301: LPERSVSVLR AWLFEHFLHP YPKDSDKHML AKQTGLTRSQ VSNWFINARV RLWKPMVEEM YMEEVKDHEE NGSGEKTSKS EDNNLEDSAL KSSGQQEKSP
401: GSENQARSFK SKPDNPTNKS APPVISMATA ATSPIGGGNA RNQPRFTLMG PSEMEGMAQG SPKKPRSTDV LHSPSSVPSM DMDVKPGEAN HHHISMKFSN
501: ERQGRDGYPL MAGPTNFIGG FESYSLGEIG RFDAEQFTPR FSGNGVSLTL GLPHCENLSL SGTHQTFLPN QNIQLGRRVD MGEPNEYGTI NTTTPHSTAA
601: YENINMQNGK RFAAQLLPDC GLIS

Best Arabidopsis Sequence Match ( AT2G35940.3 )
(BLAST)

001: MAAYFHGNPP EISAGSDGGL QTLILMNPTT YVQYTQQDND SNNNNNSNNS NNNNTNTNTN NNNSSFVFLD SHAPQPNASQ QFVGIPLSGH EAASITAADN
101: ISVLHGYPPR VQYSLYGSHQ VDPTHQQAAC ETPRAQQGLS LTLSSQQQQQ QQHHQQHQPI HVGFGSGHGE DIRVGSGSTG SGVTNGIANL VSSKYLKAAQ
201: ELLDEVVNAD SDDMNAKSQL FSSKKGSCGN DKPVGESSAG AGGEGSGGGA EAAGKRPVEL GTAERQEIQM KKAKLSNMLH EVEQRYRQYH QQMQMVISSF
301: EQAAGIGSAK SYTSLALKTI SRQFRCLKEA IAGQIKAANK SLGEEDSVSG VGRFEGSRLK FVDHHLRQQR ALQQLGMIQH PSNNAWRPQR GLPERAVSVL
401: RAWLFEHFLH PYPKDSDKHM LAKQTGLTRS QVSNWFINAR VRLWKPMVEE MYMEEMKEQA KNMGSMEKTP LDQSNEDSAS KSTSNQEKSP MADTNYHMNP
501: NHNGDLEGVT GMQGSPKRLR TSDETMMQPI NADFSSNEKL TMKILEERQG IRSDGGYPFM GNFGQYQMDE MSRFDVVSDQ ELMAQRYSGN NNGVSLTLGL
601: PHCDSLSSTH HQGFMQTHHG IPIGRRVKIG ETEEYGPATI NGGSSTTTAH SSAAAAAAYN GMNIQNQKRY VAQLLPDFVA

Arabidopsis Description

BLH1BEL1-like homeodomain protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ56]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.